Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0116 ATGGCTGATAGGGATGCCTTTTTGGTCCATCTATCTGACAAAAGTAGATCTATCGGTTATTCTACCATAAATATAAACCATGGGGAAGGGGAGCAACAGCTGCCTTTAGTTAAAGATTCTCTATATTTTGCCATCAATGAGGTGATAGGTGTTGTTGAGATATCACAGACTATAGATGTAGACTATGAAATTCAGTCCCATTTTATGAGGGAGCCAAATGATATATTCAATTCTCAAGTAGAAAAACCAATGTGTTGGAAGGAAAAGCTGGTAACTATGACATTTGATCTTTTAGGATCTTGTGATGCTTTGGCATTTACTTTCCAATATATCCGAATAATAAAGTGCCTTGCAAAAGTTTGGGAACATTTCCTCCCAAAGAAATGGTTGTGTTCTCGTGTAATGGGAGAATTGAACTATAAACTAGCAAAGCTTGATGAAAGGGTTAAAGACTTAAGAATTCAGTTTATAGGGTTTTCTACAAAAAAGGAATTGAATGTCTTGGAGTTAATGTTAGTGACTTGTGCCTTTAGGCTGTGTAAAGTTGAAATCTACTATTGCATTCGTACAGTAAGGAGGATGACTTCAATATTTTCACAAGTGGGATCTTTCCTTAAAGACAGCTCTGTCGTGCCATCTATGTTCGTAGTTGAACTTAAGAAATTGTTTTTTGAAAGTGGTAAATACAAGAACATGGGCCATACTGAGGAGGAACTTCTCTCCGTCAAATCAAATGTTGCAGCACCCTCCATGGCCAAAGAGGAAATTCCAATCGGACTGATTCTTGATTTGGATTCATCACTTGGAGCTATGGCTAATAAATGCATAGAGATGGGACTCCAGGATTTCTATAGCCACAGGTCTCACTATCAAACCGGACTCTCCCTTCATATCAGGAATTCTGAAGATGATATGGTCACTGCAGTTTCTGCAGATATAGAAATGCATGGCACGGGACCCAAACTTCTCAATACAATTGAGGCCACTAATTTCACAGGCTTGTCAGGCAATTTCAGTTTAGCTGGAAAACAGCTAGAACCATCTGTACTTGAAGTGTACAATGTGATAGGACAAAGAGAAAGGATCATTGGATTTTGGAGCCCTCAAAGAGGACTTATCCAAAATATTAGTGATCAATTTGAGGAGCCAAGTGGGAAGGACAGATTGAAGTTACCGATGTGGCCAGGGGACACCACGGAGAAACCAACGAAGCTGAGAATTGGGGTCCCAGTAAAAGAAGATTTCACTGAATTTTTGAAAGTAGAAAGAGGATCTCGAAGTAGTAAGCCATATATTTTTGGTTTTGCCTTTCAAGTGTTTTTAAAAGCGGTTGATGTTTTACCATTTCCTCTATCTTTTGAGCTTGTCCCCTTGACGAAGAAAAATGGAGTGACTGCCGGAAACTATGATGATCTTCTTTGCAATATTAAACAGATGGTAATGCAAGTTTACACTGCGAATTTGACGTCCATCTTAACAGAAGGGACAGAGCCAAAGCCCGCATACAAGGACGTAGAAGTGATTAAAAGGAAAAACTTGTCGGTGGGATATCAGAGGGAATCCTGGGTTAAAAGGCTTCTAGTTGAACAAATAGGATTGAAAGAGACTCAGTTGAAGCCTTTAGGCACTCGTGAGCAGTATGATTATGCATTATCAAAAGGAAGCGAAGATGGAGGACCAATCTACACAACTGGTGGATTTGGCTTTGCGTTCCAACAAAAATCTAATCTAGTGTCGTACTTTTCGACTGCAATCTTAAATGTGACTCAAGATGTAGACACATTTTATGCCCTCAAGAACAAGTACTCCTTACCCACCACGGTTGATGCCACCTCCGGATACCATAAAGATTCAGAGAGGCGAAGCTTGAAGATTACTGACTTTGGAGGCCTTTTCCCATTAGTATTGTACATTTTAGCTCTCTTCGTTAGCCTTGCAATTCTTAAAACACCATCGGTGATTAACTTTTTGCGTTCGAGATTCAGAGGTATGTTGACCAGATGGCTAAGTTAG 2013 0.3969 MADRDAFLVHLSDKSRSIGYSTININHGEGEQQLPLVKDSLYFAINEVIGVVEISQTIDVDYEIQSHFMREPNDIFNSQVEKPMCWKEKLVTMTFDLLGSCDALAFTFQYIRIIKCLAKVWEHFLPKKWLCSRVMGELNYKLAKLDERVKDLRIQFIGFSTKKELNVLELMLVTCAFRLCKVEIYYCIRTVRRMTSIFSQVGSFLKDSSVVPSMFVVELKKLFFESGKYKNMGHTEEELLSVKSNVAAPSMAKEEIPIGLILDLDSSLGAMANKCIEMGLQDFYSHRSHYQTGLSLHIRNSEDDMVTAVSADIEMHGTGPKLLNTIEATNFTGLSGNFSLAGKQLEPSVLEVYNVIGQRERIIGFWSPQRGLIQNISDQFEEPSGKDRLKLPMWPGDTTEKPTKLRIGVPVKEDFTEFLKVERGSRSSKPYIFGFAFQVFLKAVDVLPFPLSFELVPLTKKNGVTAGNYDDLLCNIKQMVMQVYTANLTSILTEGTEPKPAYKDVEVIKRKNLSVGYQRESWVKRLLVEQIGLKETQLKPLGTREQYDYALSKGSEDGGPIYTTGGFGFAFQQKSNLVSYFSTAILNVTQDVDTFYALKNKYSLPTTVDATSGYHKDSERRSLKITDFGGLFPLVLYILALFVSLAILKTPSVINFLRSRFRGMLTRWLS 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0116 670 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 305 475 IPR015683 -
Dere12g0116 670 SUPERFAMILY Periplasmic binding protein-like II 403 591 - -
Dere12g0116 670 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0116 Dere-ChrDere12 1455778 1466961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0116 479 590 Ion Channels AT2G24720 29.710 1.15e-06 50.1