Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0104 ATGGCTTCAAACTCGTCTCCCAATTTGAATTTAAATCCAACCAGCTTTTCTTCCTCTCATTTCATGACGACCTCTTTCACCGAACTCCTTTCCATGGACAATCACTGGGCTACTTCTGAAATTCCCAAGTTCAAGTCAACCCCACCTCCTTCCTTACCCCTTTCTCCCTCCCCTCTTTCTCCTTCTTCCTATTTGGCTATCCCATCTGGGTTCAGCCCAACCCAGTTCTTGAACTCGCCCTTGTTTCTTTCATCCCCAAATGTTTTTCCTTCTACTGAGACCCTTAGTAACAAGGAGGAGGAGGAAAAAGTATACGCAGACTTCTCTTTCCAAACCCAAACCAAGCCCTCGTCCCTCTTTGAATATTCTTCAAGCATGTTTCAGGCGCAGGAACCACCGAAACAGGAAGCATGGAATGAGAAGACAGTGACAAAATCTGAATATCCATCAACTCAGAGCTTCTTCTCAGAAATGGCTTCAACAAGACCACTACAAATACAAAGCAATTCGGCTCCCGGTTCTGGTTTTACTAACTACACAAATTCGTCTCAGTCCATAAGAGAGCAAAAGACGTCAGAAGATGGGTACAAGTGGAGGAAATATGGACAGAAACAAGTGAAGGCTAGCGAAAATCCACGCAGTTATTACAAGTGCACGCATCCCAATTGCTCTATGAAGAAGAAAGTTGAGAGGTCTTTGGATGGACAAATTACTGAGATAGTATATAAGGGAAGCCATAACCATCCCAAGCCTCAATCTACTAGAAGAACAAGTTCTCAATCAATTCAACCGTCTTCCTCATGTAACAACTCCGGGATTTCTGATCAATCGGCAGTGACCCTAGGGAATCCACAAATGGAGCCAGTCTCGATGCAAGAAGATTCTTCAGTCTCTCTTGGAGAAGAAGACTTTGAGCAAACATCACAAACCTGTTACTCTGGGGTTGATGACAATGACCTTGGCCCTGACGCCAAAAGATGGAAAGGAGAAAATGAAATTGATGGCTATGCCAACTCTGGGAGTAGAACTGTGAGGGAACCAAGAGTTGTAGTTCAAACTACAAGTGAAATTGATATTCTTGATGATGGTTATAGGTGGAGGAAATACGGACAGAAAGTAGTAAAAGGAAATCCAAACCCAAGGAGCTACTACAAGTGCACAGCTCCCGGTTGTTCAGTGAGGAAACACATTGAGCGAGCAGCACATGATACAAAAGCTGTGATCACAACGTATGAAGGGAAACACAACCATGATGTTCCTGCAGCTCGAGGCAGTGGGGGTTATAATGTAAACGCAGCTTCTTTGAACAGCAACACCACCAGCAGCAACATTGTACCTGCGCCTATAAGGCCATCGGTGGTGACCAGTTATCCCAGCAAATCAAGTTTCACAAATTCACTTCATAATACAAGCCTGCCAACATCGGCAGGTCAAGAACCAATTCCACTAGACATGTCGCAGAACCCGGCAAATTTGGGATACTCAGATTTTGTTAGATCGATGGGCTCATATAACAATCATGCTCAATACCCAGATGCTGCATACACCAAGGTCGAGGGGGAGAGGAATGAAGATTCCTTCCTTCAGTCATTTATGTCCAAGAATTTTTGA 1611 0.442 MASNSSPNLNLNPTSFSSSHFMTTSFTELLSMDNHWATSEIPKFKSTPPPSLPLSPSPLSPSSYLAIPSGFSPTQFLNSPLFLSSPNVFPSTETLSNKEEEEKVYADFSFQTQTKPSSLFEYSSSMFQAQEPPKQEAWNEKTVTKSEYPSTQSFFSEMASTRPLQIQSNSAPGSGFTNYTNSSQSIREQKTSEDGYKWRKYGQKQVKASENPRSYYKCTHPNCSMKKKVERSLDGQITEIVYKGSHNHPKPQSTRRTSSQSIQPSSSCNNSGISDQSAVTLGNPQMEPVSMQEDSSVSLGEEDFEQTSQTCYSGVDDNDLGPDAKRWKGENEIDGYANSGSRTVREPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTAPGCSVRKHIERAAHDTKAVITTYEGKHNHDVPAARGSGGYNVNAASLNSNTTSSNIVPAPIRPSVVTSYPSKSSFTNSLHNTSLPTSAGQEPIPLDMSQNPANLGYSDFVRSMGSYNNHAQYPDAAYTKVEGERNEDSFLQSFMSKNF 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0104 536 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 78 442 IPR044810 GO:0003700
Dere12g0104 536 Gene3D WRKY domain 178 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere12g0104 536 MobiDBLite consensus disorder prediction 167 189 - -
Dere12g0104 536 MobiDBLite consensus disorder prediction 242 327 - -
Dere12g0104 536 Pfam WRKY DNA -binding domain 361 417 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g0104 536 Pfam WRKY DNA -binding domain 193 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g0104 536 ProSiteProfiles WRKY domain profile. 187 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g0104 536 SUPERFAMILY WRKY DNA-binding domain 187 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere12g0104 536 FunFam WRKY transcription factor 33 347 413 - -
Dere12g0104 536 SMART WRKY_cls 360 419 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g0104 536 SMART WRKY_cls 192 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g0104 536 Gene3D WRKY domain 347 413 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere12g0104 536 SUPERFAMILY WRKY DNA-binding domain 352 420 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere12g0104 536 ProSiteProfiles WRKY domain profile. 355 420 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g0104 536 MobiDBLite consensus disorder prediction 247 315 - -
Dere12g0104 536 MobiDBLite consensus disorder prediction 167 198 - -
Dere12g0104 536 FunFam WRKY transcription factor 181 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0104 Dere-ChrDere12 1362219 1365079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0104 40 532 WRKY Transcription Factor Family AT2G38470 44.527 8.28e-110 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere12g0104 WRKY 2.3e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0104 12 1362219 1365079 Dere12g0104 12 1362219 1365079 ECH