Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0078 ATGTTAATTCCGTCCGAGGTTTCGACTTGGTCGGTACGGCTGGGAAGAAGAGATTCAACTACAGCTAGTTTAAGTTCGGCTAACTCAGACTTGCCTGCTCCAACTTTGGATCTTAGTGCCCTAATCTCTGCTTTCTCCAAGAAAGGTTTCACAGCTAAAGAAATGGTTGCTCTCTCAGGATCTCACACAATAGGGCAAGCGAAGTGCACGAACTTCAGAACAAGGATTTATAACGAGACCAACATTGATTCCTCGTTTGCAAAAACATTACAAGGACAGTGTCCGAGCGCAGGTGGTGATGACAATTTGTCGAATCTCGACACAACCACTCCCAGCAAATTCGACAACGCTTACTACAAGAACTTGTTAAGCAAGAAGGGGTTGTTGCACTCCGACCAACAGCTCTTCAATGGCGGATCCACTGACTCTCAAGTTACTGCTTATAGCAACAACGCTGCAAATTTCAGAACTGATTTCGCGAATGCCATGGTTAAAATGGGCAATCTCAGCCCTCTCACAGGATCCAACGGTCAGATTAGGACCAATTGTAGGAAGGTCAATTAA 564 0.4521 MLIPSEVSTWSVRLGRRDSTTASLSSANSDLPAPTLDLSALISAFSKKGFTAKEMVALSGSHTIGQAKCTNFRTRIYNETNIDSSFAKTLQGQCPSAGGDDNLSNLDTTTPSKFDNAYYKNLLSKKGLLHSDQQLFNGGSTDSQVTAYSNNAANFRTDFANAMVKMGNLSPLTGSNGQIRTNCRKVN 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0078 187 PANTHER PEROXIDASE 72-RELATED 9 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere12g0078 187 ProSiteProfiles Plant heme peroxidase family profile. 1 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere12g0078 187 Gene3D Peroxidase, domain 2 32 166 - -
Dere12g0078 187 Pfam Peroxidase 8 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere12g0078 187 ProSitePatterns Peroxidases proximal heme-ligand signature. 54 64 IPR019793 -
Dere12g0078 187 PRINTS Haem peroxidase superfamily signature 54 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere12g0078 187 PRINTS Haem peroxidase superfamily signature 107 122 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere12g0078 187 PRINTS Haem peroxidase superfamily signature 6 18 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere12g0078 187 FunFam Peroxidase 32 166 - -
Dere12g0078 187 Gene3D - 7 187 - -
Dere12g0078 187 PRINTS Plant peroxidase signature 121 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere12g0078 187 PRINTS Plant peroxidase signature 105 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere12g0078 187 PRINTS Plant peroxidase signature 6 21 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere12g0078 187 PRINTS Plant peroxidase signature 161 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere12g0078 187 PRINTS Plant peroxidase signature 53 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere12g0078 187 SUPERFAMILY Heme-dependent peroxidases 8 187 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0078 Dere-ChrDere12 847851 867907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0078 10 187 Peroxidase AT5G05340 61.111 4.81e-78 234