Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0051 ATGCACACGCCTCCTTTCTCTTCCTCTGCTCTTTCATTGGTTCCTTCAGGCCTTTCCGGTCACCGTAGATTCACATTACCTCCTCATTCTCTTCTTTCTCCGATCCGATTAAACCTCAACACTCACTTCGTGAATGTGAATCCACATGAATTGAGTTTGAAAATGGCGTCAAGGACTTGCATGAACGTCGCATGCGCCACCTCGACGTCGGCTCAGTGGCGGAAAGGTTGGGCCCTTCGATCCGGGGAATTCGCCGATCTATGTGATAAGTGCGGTTCTGCTTATGAGCAATCAACATTTTGCTATGTCTTCCACTCAAAGGATTCTGGTTGGAGGGAGTGTGCTTCATGTGGCAAGCGTCTTCATTGTGGATGCATTGCTTCTCGGTGTTTGCTTGAGTTGCTAGATACTGGTGGTGTAAGCTGCATAAACTGTGCAAGGGATTCTGGACTTCAACCTATTTCAACTACTGAAAAGCCAGATGGATCTGGTACATCTAAGGTTGAAATTGACAGTGAACTGCAATGTACGTTTTTTCCTAACAAATTAAAAGGAAGTAACGTCGAAAAAGTGAGGGGTGTGCAAGCAGGGGACTATGCAGAAAATGATGGGCTTAAGAGTTGGCTCCAACCTCATAATGTTGCTACAAATGGGCCTTCAATGCGATTAAAACAAGAAGTTCTGCCGTCTAATGGAGAACTTGGAAGCACTTCGATGTCACAATTTCATCCAGAGTCAAATGGATCATCTAAAGCTGCCAAAGTAGACAATTGCAAAACTGACATAGAAATAAGAGATATGTATGAATCATTGGCTCAAACAAATTTGAGTATGACTCTTGGTGCTCCCTTAGGAAATTCACATCCCTATCGTGGTGATGTTTTTGATGAAAGGGAACATAGTAAGACATCATCTTCAATATTATTGGGGCCCAGATCTCGCCATCTCTTACCCAAGCCCCCTAGGTCAACCCTTACCACAGGCTTGGAGGCAAATGCAGGGATGGTGTCTCAAATTCGTGTTGCCAGGCCACCTGCCGAAGGACGAGGAAGGAATCAGTTACTTCCCCGTTACTGGCCTAGAATTACTGATCAAGAGTTGCAACAAATCTCTGGAGATTCAAATTCCATCATTGTGCCACTGTTTGAAAAGATGCTTAGTGCTAGTGATGCTGGTCGAATTGGCCGCTTGGTTCTTCCAAAAGCATGTGCTGAAGCATATTTTCCTCCTATCTCTCAGCCAGAGGGCCTTCCTTTACGAATTCAAGACGTCAAAGGGAAAGAATGGGTATTTCAGTTTAGATTCTGGCCAAACAATAACAGCAGAATGTATGTTTTAGAAGGTGTAACCCCCTGCATTCAGTCTATGCAGTTGCAAGCTGGAGACACTGTTACATTTAGTCGTATGGACCCTGAGGGAAAACTTATAATGGGGTTTCGGAAGGCAGCAAATTCTGCAGTACAGGAATCTCATCCATCTAATATTCCCATTGGCTCTCGTTCAAGTGAAACTTCCTATTCTGGTGTCTATGAGAATTTACCTGTATTAAGTGGCTACTCTGGCCTTCTTCAGTCATTAAAGGGAAGTTCAGAAAGTCACCTAAATGCATTGTCTAAAAAGTGGAATTCATCTAGTGGTGACATGAATTGGCATAATATTGAGATGCCTGAAGGCAGGAAGAGAGAAGGATTGCTTCTGCCACCAGTGCTGGTTCCTGAGAAGAAAAGGACTCGCAATATTGGGCCAAAAAGTAAGAGGTTGCTTATTGATAGCCAGGATGCACTGGAGCTGAAACTTACCTGGGAAGAGGCTCAGGATTTGCTCCGTCCACCTCCTGCAGTTAAGCCAAGCATTGTCATGATTGAAGATCATGTATTTGAAGAATATGAAGAACCTCCTATATTTGGGAAGAGAAGTATATTTGTAGTCCGCTCAAGTGGGATACATGAACAATGGACACAGTGTGATAGTTGCTCAAAATGGCGTAAGTTGCCTGTTGATGTACTTATTCCCCCTAAGTGGACATGCGTGTACAATTCGTGGGATCAGAACAGGGGTTCATGTTCTGCTCCCAATGAGCTGTCGCCAAGGGAACTGGATAATCTTTTGAGACTGAATAAGGAATTCAAGAAACAAAAAATAGCAGCAAGCCATGGACCGACCCTGGAGCAGCATGAATCTTCTGGACTGGATGCTTTGGCTAATGCTGCAATACTTGGAGACGATGCAGGTGACTCTGGCAGGACACCAGTTGCTACCACTACAAAACACCCTCGGCATAGGCCTGGCTGCTCCTGCATTGTCTGTATACAGCCACCCAGTGGGAAGGGAAAACACAAGCCTACATGCACTTGCAACGTGTGCATGACGGTTAAACGTCGGTTTAAAACCCTGATGATGCGAAAGAAGAAACGTCAATCTGAACGTGAAGCAGAGATTGCTCAGAGAAACCAGCAATTGTGTGGGCCCAGGGATGAATCAGAAGTAGACAGCACCTCTAGAAATTTAACTCCAGCTGATGGTTCTGAGACTGAAGCTAGGGTACCAAATGAGTTGGACTCAAGAAGTCAAACTGATGTGGCTGAAACTTCCAAGGGACAATTAGACTTGAATTGCCATCCTGATCGAGAAGACATGCAAGCTTCGTTAAACAATGTAAGCATGATGACTCTACTTCAAGAAGCAAGTCTGCCTTTGGAGACATATTTGAAGCAAAATGGTCTTACTAGCTTGATATCAGAGCAACCTGCAAATTCAGCTTCCAACGTGCAGGTACAGACTACTAACGAGAGTGAGGGAAGACATAACGAGGATTGCTGCGCTGCTTCTGCTGTTCAGGAGCAAGAAAGCAGTCCTGAAGAGAACAGTGGGCAAGATAAAAGCGAAAATCATCCCCCTTCGTGA 2904 0.4473 MHTPPFSSSALSLVPSGLSGHRRFTLPPHSLLSPIRLNLNTHFVNVNPHELSLKMASRTCMNVACATSTSAQWRKGWALRSGEFADLCDKCGSAYEQSTFCYVFHSKDSGWRECASCGKRLHCGCIASRCLLELLDTGGVSCINCARDSGLQPISTTEKPDGSGTSKVEIDSELQCTFFPNKLKGSNVEKVRGVQAGDYAENDGLKSWLQPHNVATNGPSMRLKQEVLPSNGELGSTSMSQFHPESNGSSKAAKVDNCKTDIEIRDMYESLAQTNLSMTLGAPLGNSHPYRGDVFDEREHSKTSSSILLGPRSRHLLPKPPRSTLTTGLEANAGMVSQIRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSIIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKAANSAVQESHPSNIPIGSRSSETSYSGVYENLPVLSGYSGLLQSLKGSSESHLNALSKKWNSSSGDMNWHNIEMPEGRKREGLLLPPVLVPEKKRTRNIGPKSKRLLIDSQDALELKLTWEEAQDLLRPPPAVKPSIVMIEDHVFEEYEEPPIFGKRSIFVVRSSGIHEQWTQCDSCSKWRKLPVDVLIPPKWTCVYNSWDQNRGSCSAPNELSPRELDNLLRLNKEFKKQKIAASHGPTLEQHESSGLDALANAAILGDDAGDSGRTPVATTTKHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQRNQQLCGPRDESEVDSTSRNLTPADGSETEARVPNELDSRSQTDVAETSKGQLDLNCHPDREDMQASLNNVSMMTLLQEASLPLETYLKQNGLTSLISEQPANSASNVQVQTTNESEGRHNEDCCAASAVQEQESSPEENSGQDKSENHPPS 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0051 967 ProSiteProfiles B3 DNA-binding domain profile. 382 483 IPR003340 GO:0003677
Dere12g0051 967 FunFam B3 domain-containing transcription repressor VAL1 360 487 - -
Dere12g0051 967 SUPERFAMILY DNA-binding pseudobarrel domain 380 481 IPR015300 -
Dere12g0051 967 MobiDBLite consensus disorder prediction 914 967 - -
Dere12g0051 967 MobiDBLite consensus disorder prediction 914 930 - -
Dere12g0051 967 MobiDBLite consensus disorder prediction 230 254 - -
Dere12g0051 967 MobiDBLite consensus disorder prediction 820 840 - -
Dere12g0051 967 MobiDBLite consensus disorder prediction 953 967 - -
Dere12g0051 967 MobiDBLite consensus disorder prediction 799 875 - -
Dere12g0051 967 MobiDBLite consensus disorder prediction 741 761 - -
Dere12g0051 967 Gene3D - 649 705 - -
Dere12g0051 967 Gene3D - 360 487 IPR015300 -
Dere12g0051 967 ProSiteProfiles Zinc finger CW-type profile. 646 696 IPR011124 GO:0008270
Dere12g0051 967 Pfam B3 DNA binding domain 382 481 IPR003340 GO:0003677
Dere12g0051 967 CDD B3_DNA 380 481 IPR003340 GO:0003677
Dere12g0051 967 SMART B3_2 382 482 IPR003340 GO:0003677
Dere12g0051 967 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 57 921 - -
Dere12g0051 967 Pfam CW-type Zinc Finger 651 693 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0051 Dere-ChrDere12 495988 503243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0051 58 936 B3 DNA Binding Superfamily AT4G32010 50.112 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Dere12g0051 B3 2.7e-15 CL0405