Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0040 ATGGCGAATCTGGCATCCCACCGAGTAAGAGCAAAGGAAGAGCTAGAGAGAGGGCGTGAGTTTGCGAACCAGCTTCGACAATTGATCTTCAGATTCAACGGAGAAGATGACGAAGACGACGAGGGTTCAACGACGCCGTCTGCTGAGGATCTTGCGGCTAAGGTGGAGGGGTCTTTCACAAACACCCTTTTGCTCCTCAACCCTACTCATCATGATGGATCCCAACAACAACAATTGAATGTCTCTGATTCTCCTGCTAAGTCCGAGGATTCTCAAGACAGTTGCAGGAGCAGGAGCAGGAGCTCCCCCATTACTAGAGATGGAAGAGGCTCCTACAAAAGAAGAAAAAGTGCACATACATTGGAGCAGGACTCGGAAATCAGTCCAGGGGAAGATGGATACGCATGGAGAAAGTATGGCCAGAAAACGATACTCCATGCCAAATACCCAAGGAACTACTTCAGGTGCACTCACAAGGTTGACCAGGGATGCCAAGCAACCAAACAAGTGCAGAGAATTCAAGAGGAGCCTCCACTATATAGAACCACCTATTTTGGCCACCACACCTGCAGAAACTTGCTCAGCCCTCAGATCATTCTGGATCCTCATGATCTTCCTAACTCTTCTTGCATCCTCAGCTTCGATAATAGAACCCTCTCATCCCAACCCCAACCCACCTACCCTTTTCTTTCCTTCTCTATTCCTGATTCTATCAAAAAGGAGGAAAGCAATAATAACAATAATAATAATAATAATAATAATATTCCCTCCTATTCCTCCAATGATTACCTTCTCTCTCCTGATGAACTCGTTTTTGAGTCTGATCATAGGGACGTGATTTCTTCTGGTGGATTTTATGATCCTCTTCATGATTTCGATGCTGGCGTCTTTGATCCATTTGAATTTTGA 909 0.4532 MANLASHRVRAKEELERGREFANQLRQLIFRFNGEDDEDDEGSTTPSAEDLAAKVEGSFTNTLLLLNPTHHDGSQQQQLNVSDSPAKSEDSQDSCRSRSRSSPITRDGRGSYKRRKSAHTLEQDSEISPGEDGYAWRKYGQKTILHAKYPRNYFRCTHKVDQGCQATKQVQRIQEEPPLYRTTYFGHHTCRNLLSPQIILDPHDLPNSSCILSFDNRTLSSQPQPTYPFLSFSIPDSIKKEESNNNNNNNNNNNIPSYSSNDYLLSPDELVFESDHRDVISSGGFYDPLHDFDAGVFDPFEF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0040 302 MobiDBLite consensus disorder prediction 89 126 - -
Dere12g0040 302 MobiDBLite consensus disorder prediction 67 88 - -
Dere12g0040 302 SUPERFAMILY WRKY DNA-binding domain 126 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere12g0040 302 SMART WRKY_cls 130 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g0040 302 Gene3D WRKY domain 115 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere12g0040 302 MobiDBLite consensus disorder prediction 238 259 - -
Dere12g0040 302 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 236 IPR044810 GO:0003700
Dere12g0040 302 Pfam WRKY DNA -binding domain 131 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere12g0040 302 MobiDBLite consensus disorder prediction 67 133 - -
Dere12g0040 302 ProSiteProfiles WRKY domain profile. 125 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0040 Dere-ChrDere12 396944 398272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0040 8 276 WRKY Transcription Factor Family AT3G56400 35.531 8.71e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere12g0040 WRKY 2.4e-24 CL0274