Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0038 ATGAGTACTGATCAACCACTACTTTCAGAGTCAGATTCCTCTTTGGGGATTCATCGCCGTTCTCGGAAACCAGGATCTTTCAGCCGCTTTGTCTCCTTCCCATCTACCATTTTCGATGATGCTCAAATTGGTAATTTTGATGTGAAGGACATAGACATTATATCTGTTGGAGATTCTAGTTTTCGTACTGCACTTGAGCATTGCACTTCTGCAACAGAAAAGGACTTGCAACCAGCTGAATCCCAGTTTTGCCAGCAGTTACATTTGGAATGCCCCACTCGAGAGAGGAGGCGCCTGGTATCGTGGGGGGCAATGGAACACCGTGATATGAATAGCAACAGTGTGCCATTTGAAATATCTAGTGCTCCATCTCGAGTGCAGGAAAAGTTAAATAAATCACAGAGAATTCGCCCCAAAAGTGTGCAATTTGATGATAACCTCTTACATGATGAAAATTCGAGGTCAGTCTATATCAATGACCCCAAGAAGACAAATGACAAGTATGAGTTCACAGGGAATGAGATCCGCACTAGTAAATACACAATTATCACCTTCCTGCCTAAGAATCTTTTCATTCAGTTTCATCGGGTTGCTTATTTGTATTTCCTAGCTATTGCGGCTCTGAATCAGCTCCCTCCACTGGCTGTATTTGGTAGAACAGTGTCTCTTTTTCCCCTCTTGTTTGTGCTTTGTGTCACAGCTATTAAGGATGGTTATGAGGATTGGCGGAGGCACAGGTCAGACCGCAATGAGAACAACCGAGAGTCTCTGGTACTTCAATCTGGTGATTTCCGACCAAAGAAATGGAAGAATATAGAAGTTGGTGAGGTTGTTAAGATCTTTGCTGATGAGACTATTCCAGTTGATATGGTCTTGTTGGGGACAAGTGATCAAAGTGGGCTTGCCTATATTCAGACTATGAATTTGGATGGAGAATCAAATTTAAAGACAAGATATGCTCGGCAGGAAATGGCTTCAGCAGTATCACCAGAATGTTGTGCTGTTTCTGGGGTTATTAGGTGTGAGCAACCCAACAGGAATATTTATGAATTCACGGCCAACATGGAGTTCAATGGGCACCGGTTTCCCCTTAGCCAATCAAACATTGTTCTGCGTGGTTGCCAACTGAAGAACACTGATTGGATAATTGGTGTTGTGGTTTATGCAGGGCAGGAAACAAAGGCAATGTTGAACAGTGCAGCTTCCCCTGCTAAGAGAAGCAAACTGGAAGGTTACATGAATAGAGAAACCCTTTGGTTGTCAATTTTTCTCTTTACCATGTGTTTGGTTGTGGCCCTGGGGATGGGTCTTTGGCTGGTGCGTCACAAGGACCAGCTTGATACCTTGCCTTACTACAGAAAACGATTCTTCACAGAGGGGCCGGATAATAGAAAAAGATACAGATATTATGGGATACCAATGGAAATCTTTTTCTCTTTTTTGAGCTCTATCATAGTGTTTCAGATAATGATACCCATATCTCTTTACATAACCATGGAGTTGGTTCGTTTGGGCCAGTCATATTTCATGATTGAGGACACAGATATGTATGATGCCAACTCTGGATCAAGGTTTCAGTGTAGGTCGTTAAATATTAATGAAGATTTGGGTCAAATACGCTATGTATTTTCAGACAAGACAGGAACACTAACAGAAAACAAGATGGAATTCCGAAGAGCTAGTATACATGGAAAGAATTATGGGAGTTCCTTACTTATGGCTGACAATACAATAGCAGCAGCAGTTAGTGGAAGAGCAAGATTGAAGCTCAAATCTGAAATTGCTGTTGATTCTGAACTCTTAACACTGTTGCACTCAGACTCAAATAGAGATGAAAGGATTGCTGCACATGAATTTTTCCTTACATTGGCTGCTTGTAATACTGTGATCCCTATGCTTAGTTGTGAAAAAAGCGAATCAAATGAGGATACATCCTGTATTGATTATCAGGGAGAATCTCCTGATGAACAAGCTTTAGTTGCTGCAGCCTCTGCATATGGATATACTCTTTTTGAGCGGACATCTGGACATATTGTTATTGATGTCAATGGTGAGAAACTCAGGTTGGACGTATTGGGTTTGCATGAGTTTGATAGTGTTCGAAAAAGGATGTCTGTTGTCATTCGGTTTCCTGACAATGTTGTAAAGGTGTTAGTTAAAGGTGCCGATACTTCAATGTTTAGTATCTTAGCAGATGCCAGTGAGAGCAACAATAGTATACGGCATGCAACTCAGGGTCATTTGAATGAATATTCTTTGCAAGGTTTACGCACACTTGTAGTTGCTTCCAGGAAGCTTTCAGATGCAGAACTTGAGCAATGGCAGAGCATGTATGAAGAAGCGAGCACTTCATTAACTGAGAGAGGTGCAAAACTACGTCAAACAGCAACTCTTATAGAATGCAACTTAAAGCTACTTGGAGCAACTGGGATTGAGGACAAGCTGCAAGAGGGTGTACCAGAAGCCATTGAGTCTTTACGGCAAGCTGGAATCAAGGTTTGGGTTCTTACTGGTGATAAGCAAGAGACAGCAATTTCAATTGGTCTCTCCTGCAAACTATTAACTGCAGATATGCAGCAGATTATTATAAATGGCACGTCAGAGACTGAATGCAGAAATCTTTTGGCTGATGCTAAAGCTAAATATGGTTTGAGAACTTTAGGTAGAAGAAATCAGAACATGAGGCATAAAACCAATGATGGACATGGTGATCTTGAGATTTCCAATACTACAAAGTCATTCAGTATGCATAAACGGGGTTCAGTAAAGGAAGAAGGAACTACTGCTCCATTGGCACTCGTAATTGACGGAAATAGTTTGGTTTATATATTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCTTGTAGGGTTGTGCTATGCTGTCGCGTTGCACCCCTGCAGAAAGCAGGAATTGTTGATTTGATAAAGAGCCGCACTGATGATATGACACTGGCTATAGGTGATGGGGCCAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTTGGAATATGTGGACAGGAAGGGCGCCAAGCAGTGATGGCATCTGATTTTGCTATGGGACAATTTCAGTTCTTGAAAAGATTGCTTCTGGTGCATGGACACTGGAATTATCAGCGTGTTGGCTATTTAGTTCTCTACAATTTCTACCGCAATGCTGTCTTTGTATTGATGCTATTCTGGTATATATTATGCACTGCTTTTTCTACAACTTCTGCATTGACGGATTGGAGTAGTGTATTCTATTCTGTCATTTACACATCAGTTCCTACTATTGTTGTTGGTGTTCTGGACAAAGACCTGAGTCATAAGACGCTCTTGCAGTATCCAAAACTGTATGGTGCTGGTCACCGGCATGAGGCTTATAATATGCATTTATTTTGGATCACAATGATTGACACTCTGTGGCAGAGTCTTGTTCTTTTCTACATACCCTTGTTCACCTATAAGGATAGCACAATTGATATATGGAGCATGGGCAGTTTGTGGACAATTGCAGTTGTTGTCCTTGTAAATGTACATTTGGCTATGGACATTAAGCATTGGGTATTAATTACGCATGTTGCTGTATGGGGATCAATAGTCATTACATTTGGTTGCATGGTGGTATTGGATTCTGTACCTGTCCTTCCCAATTACTGGACTTTTTATCATGTGGCTAAGTCCCCTACATATTGGATCACAATCTTGCTTATAATTATTGTGGCAATGCTCCCTCGCTTTATTTGTAAAGTTGTTTATCAAGCATTTTGGCCTTCTGATATCCAGATAGCAAGAGAAGCTGAGATAATGAAAAAACAACATAATCATCTGGGGCCAAGGCAGGAATTTGGGAGAAATTTGAAGCTGCCTAGGCTTAGAATGGATGAGTTGCAGGAGCAGATTGCAGTGATGTGTGACAAATGCCTAGGCATCCAAACATGAGGCCTGTACGAGTACGAACAGAGGGAGAGAAAGCAAGCCAATCAATCCGAACAAAAGAAAACACCCGACAAAGAATGCAAAACCAGAGGAAAACAAGCGGTTAAAGTAGTACTGGTGCTCCAGTCTCCACCTACACCAGCACTTGAGGCTCATATCACAGCAAGTGCCGTTACCACCACCGCCAATCTGGCCGGAACCTTTGTCGCAGTCACCGTCGCGGGATGA 4164 0.4191 MSTDQPLLSESDSSLGIHRRSRKPGSFSRFVSFPSTIFDDAQIGNFDVKDIDIISVGDSSFRTALEHCTSATEKDLQPAESQFCQQLHLECPTRERRRLVSWGAMEHRDMNSNSVPFEISSAPSRVQEKLNKSQRIRPKSVQFDDNLLHDENSRSVYINDPKKTNDKYEFTGNEIRTSKYTIITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRPKKWKNIEVGEVVKIFADETIPVDMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQEMASAVSPECCAVSGVIRCEQPNRNIYEFTANMEFNGHRFPLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPAKRSKLEGYMNRETLWLSIFLFTMCLVVALGMGLWLVRHKDQLDTLPYYRKRFFTEGPDNRKRYRYYGIPMEIFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDTDMYDANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASIHGKNYGSSLLMADNTIAAAVSGRARLKLKSEIAVDSELLTLLHSDSNRDERIAAHEFFLTLAACNTVIPMLSCEKSESNEDTSCIDYQGESPDEQALVAAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNVVKVLVKGADTSMFSILADASESNNSIRHATQGHLNEYSLQGLRTLVVASRKLSDAELEQWQSMYEEASTSLTERGAKLRQTATLIECNLKLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTADMQQIIINGTSETECRNLLADAKAKYGLRTLGRRNQNMRHKTNDGHGDLEISNTTKSFSMHKRGSVKEEGTTAPLALVIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSVPTIVVGVLDKDLSHKTLLQYPKLYGAGHRHEAYNMHLFWITMIDTLWQSLVLFYIPLFTYKDSTIDIWSMGSLWTIAVVVLVNVHLAMDIKHWVLITHVAVWGSIVITFGCMVVLDSVPVLPNYWTFYHVAKSPTYWITILLIIIVAMLPRFICKVVYQAFWPSDIQIAREAEIMKKQHNHLGPRQEFGRNLKLPRLRMDELQEQIAVMCDKCLGIQTXGLYEYEQRERKQANQSEQKKTPDKECKTRGKQAVKVVLVLQSPPTPALEAHITASAVTTTANLAGTFVAVTVAG 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0038 1387 SUPERFAMILY Calcium ATPase, transmembrane domain M 170 1257 IPR023298 -
Dere12g0038 1387 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 549 819 IPR023299 GO:0000166
Dere12g0038 1387 MobiDBLite consensus disorder prediction 1 20 - -
Dere12g0038 1387 Pfam haloacid dehalogenase-like hydrolase 768 850 - -
Dere12g0038 1387 Gene3D - 803 1030 IPR023214 -
Dere12g0038 1387 SFLD Haloacid Dehalogenase 527 1041 - -
Dere12g0038 1387 Pfam E1-E2 ATPase 254 501 - -
Dere12g0038 1387 SUPERFAMILY HAD-like 538 1036 IPR036412 -
Dere12g0038 1387 Gene3D - 643 785 IPR023299 GO:0000166
Dere12g0038 1387 CDD P-type_ATPase_APLT_Dnf-like 172 1150 - -
Dere12g0038 1387 Pfam Phospholipid-translocating ATPase N-terminal 156 221 IPR032631 -
Dere12g0038 1387 Gene3D - 232 398 - -
Dere12g0038 1387 NCBIfam HAD-IC family P-type ATPase 960 1076 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere12g0038 1387 NCBIfam HAD-IC family P-type ATPase 475 567 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere12g0038 1387 NCBIfam HAD-IC family P-type ATPase 799 854 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere12g0038 1387 ProSitePatterns E1-E2 ATPases phosphorylation site. 545 551 IPR018303 -
Dere12g0038 1387 Pfam Cation transport ATPase (P-type) 639 727 - -
Dere12g0038 1387 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 142 1323 - -
Dere12g0038 1387 Pfam Phospholipid-translocating P-type ATPase C-terminal 1018 1258 IPR032630 -
Dere12g0038 1387 SUPERFAMILY Calcium ATPase, transduction domain A 253 395 IPR008250 -
Dere12g0038 1387 PRINTS P-type cation-transporting ATPase superfamily signature 990 1009 - -
Dere12g0038 1387 PRINTS P-type cation-transporting ATPase superfamily signature 543 557 - -
Dere12g0038 1387 SFLD p-type atpase 527 1041 IPR044492 -
Dere12g0038 1387 FunFam Phospholipid-transporting ATPase 648 783 - -
Dere12g0038 1387 NCBIfam phospholipid-translocating P-type ATPase 170 1265 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0038 Dere-ChrDere12 384361 395301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0038 133 1267 Primary Pumps ATPases AT5G04930 57.504 0.0 1337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0038 12 384361 395301 Dere12g0038 12 384361 395301 ECH