Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0034 ATGACAGTCATGGCTTCCTTGCTTCGTCCAACTGCAACTTCTTTTCAACATAATCGAATGACAATATCCATCTCTCCTCTGAAACCCACTACCCCAAATAATCTTTCTTTCTGGACACACCGTTTCAAGAGTAACCGTGCAAAGTGTAAAGCCTTTCTAGAGAACATTCCCAGAGATTTTTTGGAGAGCACTGTATACTTGAACCAATTCCCTGTTTTTCGATCAGGATTAATCCAATTTCAGAGAGTAACTGAAGAATTATCCGATTTCCAGAAGTGGGGTTTTCTTGCTTTTGCTGGACTGACATGGGTTTATTTGACTGCAAGGCCAGGTGTTCTAATAGGCGCCATTGACGCTTACCTTCTGGCTCCTCTGCAACTGGCTTTGGACAATTTAACAGGAAGAAGGAATCTGAAGAGGACTGATTTTATGATTGGAGATAAGCTAGGAGAAGGGTCATTTGGTGTTGTTTATTCGGGTGTTGTGGTTCCAAAGAATGTGGACGTAGAAGAGAAGAGGGGAAGAGGCAAGGCAAAAACAAATTTGGATGTGAAATCTAAGGATAAAGTAATTCTTAAAAAGGTGAAGGTTGGAATCCAAGGGGCTGAGGAATTCGGTGACTTTGAGGAGTGGTTCAATTACAGGCTTTCCAGGGCAGCTCCTGAAACATGTGCTGAGTTCCTTGGAAGTTTTGTAGCTGATAAAACAAATTCACAGTTCATTAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGATCGCACTCTTGCTGACTACATGAAAGATCGTAAATTTCCTTCAAACTTAGAGTCTGTCATGTTTGGAAGTGTCTTGCAAGGTGTAGACTCTTCTATACGAAATGCATTGATCATTAAGCAAATCATGCGCCAGATCATTACATCTCTTAAGAAAATTCACGACACAGGCATTGTTCACAGAGATGTAAAGCCAGCCAACTTAGTAGTCACGAAACGGGGTCAGATTAAACTCATAGATTTTGGTGCAGCAACAGACCTTCGGATTGGAAAGAACTATGTGCCCGACAGTACCTTACTGGATCCTGACTACTGTCCCCCAGAACTATATGTACTTCCAGAAGAAACACCAAATCCTCCTCCAGAGCCAATTGCAGCTTTCCTTTCACCAATCCTGTGGCAGTTGAACAGTCCTGATCTGTTTGATACGTATTCTGCTGGAATTGTACTCCTGCAAATGGCAATACCAACCTTAAGGTCTCCAGCTGCTTTAAAGAACTTCAATTTGGAATTGAAAACATGTAGATATGATTTGAACAAATGGCGAGATTATACTCGCCTCAGGCCTGACTTCCAAATTCTTGACTCTGACTCGGGTCGAGGGTGGGACTTAGCAACAAAGCTTATCTGTGAGAGAGGTTCCTTAAGAAGAGGACGTTTATCTGCTGCTGATGCTTTGAGACATCCATATTTTCTTCTGGGTGGTGATCAAGCAGCTGCAGTCCTTTCAAAATTGAGCTTAAGCAAGAAGTGA 1512 0.422 MTVMASLLRPTATSFQHNRMTISISPLKPTTPNNLSFWTHRFKSNRAKCKAFLENIPRDFLESTVYLNQFPVFRSGLIQFQRVTEELSDFQKWGFLAFAGLTWVYLTARPGVLIGAIDAYLLAPLQLALDNLTGRRNLKRTDFMIGDKLGEGSFGVVYSGVVVPKNVDVEEKRGRGKAKTNLDVKSKDKVILKKVKVGIQGAEEFGDFEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFIKGGKWLVWKFEGDRTLADYMKDRKFPSNLESVMFGSVLQGVDSSIRNALIIKQIMRQIITSLKKIHDTGIVHRDVKPANLVVTKRGQIKLIDFGAATDLRIGKNYVPDSTLLDPDYCPPELYVLPEETPNPPPEPIAAFLSPILWQLNSPDLFDTYSAGIVLLQMAIPTLRSPAALKNFNLELKTCRYDLNKWRDYTRLRPDFQILDSDSGRGWDLATKLICERGSLRRGRLSAADALRHPYFLLGGDQAAAVLSKLSLSKK 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0034 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Dere12g0034 503 Gene3D Transferase(Phosphotransferase) domain 1 284 486 - -
Dere12g0034 503 ProSiteProfiles Protein kinase domain profile. 143 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0034 503 Pfam Protein kinase domain 291 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0034 503 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 56 503 - -
Dere12g0034 503 SUPERFAMILY Protein kinase-like (PK-like) 141 485 IPR011009 -
Dere12g0034 503 Gene3D Phosphorylase Kinase; domain 1 130 251 - -
Dere12g0034 503 SMART serkin_6 143 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0034 Dere-ChrDere12 351605 354752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0034 143 340 MAP Kinase Kinase Kinase AT3G13530 26.368 1.15e-12 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Dere12g0034 Pkinase 1.7e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0034 12 351605 354752 Dere12g0034 12 351605 354752 ECH