Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0032 ATGACGAACATCAACTGGTGTCTTCCATTCTTTCTTTTCTTAGTTATTCAAGTTGTTCAAGCTGCGGATTATGTGCCCTCCGATAAACTCTTCCTGAGCTGTGGGGGTCCTCCAGATTCAACCGACACCGATGGCCGAAAATGGACCTCTGATATTGGGTCCAAGTTCACATCCTCTGCGGGTAACTCTACTACATCTTCTGCTGCAACCCAAAACCCCGCGGTGCCGGAAGTTCCATACATGACCGCGCGTGTCTTCCTCTCGAAGTTCACCTACACTTTCCCGGTGGCCCCTGGTCGGAAATTTATCCGTCTCTACTTCTACCCAGCTTCTTACGCCGGCCTTAATGCCTCCGACGCTCTCTTCTCTGTTACTGCTCAATCCTACACTCTTCTTAAGAACTTCAGTGTTGCTCAAACCACGTTGGCTTTAAACTACGATTCTATTGTAAAAGAATACCTGATCAACGTTGAAGGAGAATCGCTGAAGGTAACTTTTACTCCATCTCCCAATGCTTCCAATGCCTATGCCTTCATTAATGGGATTGAAATTGTGTCCATGCCTCCTGATGTTTATGGTTCTACCGATGGAACTACCGTGATTGTGGGTACAGAAACTTCATCCACGATTGATAATAGTACTGCTCTTGAGAACATTTATAGGTTGAATGTTGGTGGGAATGATATCTCGCCCTCCCATGATACCGGTCTGTTCAGGTCATGGTCTGATGACACGAGGTATGTCTTTGGGGCTGCTTCTGGGGTTACAGAGCCTGCTGATCCAGAGGTTAAGATCAATTATCCTCCTGGCACACCCACTTATGTTGCTCCGGTTAATGTCTACTCTACAGCTAGATCCATGGGACCGAATGCTAATATCAACCAGAATTATAATTTGACTTGGATTTTCTCGATTGATTCGGGGTTTTCTTATCTTGTGAGACTCCACTTTTGCGAGGGAACTACCAATGTGACCAAGATTAATCAAAGAGTGTTCGATATATTCCTCAACAATCAAACTGCTCAAGAGGGGGCAGATGTTATCGCCTGGGCCGACACTTACGATCTTCCACAGTCTAATGGGGTTCCAGTGCATAAGGATTTTGTTGTGCTTGTTCCTGAGGGGCAGCCGCAGCAGGATCTGTGGCTTGCACTGCATCCAGATACTACTTCAAAGCCTCAGTATTATGATGCAATATTGAATGGAGTGGAGATATTCAAAATTAATGACACTACTGGTAACCTTGCTGGGGCCAATCCCATTCCTGCTCCTCAGCTAGATCTCACTGACCCGTCATTGGCTAGACACTCTATTAAAGGCAAATCAAAGAATCAGAAAGCACTAATAGCTGGAGGTGTTAGCGGGGGAGTTGTTCTTGCACTTGTTATCGGACTCTTTGCTTTTGCTGCATCGCGTCGTAGGAGGCATGGCAAGGATTCTAGTGCAAGCGATGGGCCATCTGGCTGGCTCCCTCTTTCTCTCTATGGTAATTCGCACTCTGCTGGTTCTGCCAAGACCAACACAACAGGAAGTTATGCATCCTCTCTCCCATCAAACCTTTGTCGCCATTTCTCGTTTGCTGAAATTAAGTCTGCAACAAACAACTTCGATGAGGCTTTGGTCCTTGGCGTGGGAGGATTTGGTAAGGTATACAAGGGAGAAATTGACGGTGGAACGACAAAAGTAGCGATTAAACGTGGGAACCCACTGTCTGAGCAAGGGGTACATGAGTTCCAAACTGAGATTGAAATGCTCTCAAAACTTCGCCACCGTCATCTTGTTTCACTGATTGGCTACTGTGAAGAGAACTGCGAAATGATCCTTGTCTATGACTACATGGCTCATGGAACTCTCCGGGAGCATCTATACAAGACCCAGAAACCTCCACTGCCATGGAAGCAAAGACTTGAGATATGCATTGGAGCAGCTCGAGGTTTGCACTATCTACATACTGGTGCCAAGCACACTATCATCCACCGAGATGTGAAGACTACTAACATTTTATTGGATGAGAAGTGGGTGGCAAAGGTTTCTGATTTCGGATTGTCAAAAACAGGTCCAACATTGGATAACACACATGTGAGCACTGTAGTTAAGGGTAGTTTTGGGTACTTGGATCCAGAATACTTCAGGAGACAACAACTGACTGACAAATCTGATGTCTACTCCTTTGGGGTGGTTCTTTTTGAGATATTGTGTGCTCGTCCGGCTCTGAATCCGACCCTTCCAAAGGAGCAAGTAAGCTTGGCGGAGTGGGCTGCTCATTGCCACAACAAGGGCGTTCTTGACCAACTGGTTGATCCTTATCTCAAGGGTAAGATAGCACCGGAATGCTTCAGGAAGTTTGCAGAGACTGCAATGAAGTGCGTGGCCGATCAGGGCATTGAGAGGCCATCAATGGGGGATGTCCTGTGGAACCTTGAGTTTGCTTTGCAGCTGCAAGAGAGTGCAGAGGAGAGTGGGAAGGGCATTGGTGGAATGCATCACATTGATGAGGAAGAGCCATTGTATGTAAATTCTAAAGGGAAGAAGGACCCTAATGATGCATTACAAGGTTTTGATGGTAACGTAAGTGATTCCAGGAGCACTGGAATGAGCATGAGCATCGGTGGTCGGAGCTTGGCCAGCGAAGACTCCGACGGATTAACGCCTAGCGCTGTATTTTCACAAATCATGAATCCAAAAGGGCGTTAA 2694 0.4655 MTNINWCLPFFLFLVIQVVQAADYVPSDKLFLSCGGPPDSTDTDGRKWTSDIGSKFTSSAGNSTTSSAATQNPAVPEVPYMTARVFLSKFTYTFPVAPGRKFIRLYFYPASYAGLNASDALFSVTAQSYTLLKNFSVAQTTLALNYDSIVKEYLINVEGESLKVTFTPSPNASNAYAFINGIEIVSMPPDVYGSTDGTTVIVGTETSSTIDNSTALENIYRLNVGGNDISPSHDTGLFRSWSDDTRYVFGAASGVTEPADPEVKINYPPGTPTYVAPVNVYSTARSMGPNANINQNYNLTWIFSIDSGFSYLVRLHFCEGTTNVTKINQRVFDIFLNNQTAQEGADVIAWADTYDLPQSNGVPVHKDFVVLVPEGQPQQDLWLALHPDTTSKPQYYDAILNGVEIFKINDTTGNLAGANPIPAPQLDLTDPSLARHSIKGKSKNQKALIAGGVSGGVVLALVIGLFAFAASRRRRHGKDSSASDGPSGWLPLSLYGNSHSAGSAKTNTTGSYASSLPSNLCRHFSFAEIKSATNNFDEALVLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLPKEQVSLAEWAAHCHNKGVLDQLVDPYLKGKIAPECFRKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESAEESGKGIGGMHHIDEEEPLYVNSKGKKDPNDALQGFDGNVSDSRSTGMSMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0032 897 FunFam Receptor-like protein kinase FERONIA 508 612 - -
Dere12g0032 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Dere12g0032 897 FunFam FERONIA receptor-like kinase 29 188 - -
Dere12g0032 897 FunFam Receptor-like protein kinase FERONIA 613 823 - -
Dere12g0032 897 Gene3D - 215 409 - -
Dere12g0032 897 Gene3D - 30 187 - -
Dere12g0032 897 Pfam Protein tyrosine and serine/threonine kinase 541 804 IPR001245 GO:0004672|GO:0006468
Dere12g0032 897 Gene3D Phosphorylase Kinase; domain 1 521 612 - -
Dere12g0032 897 MobiDBLite consensus disorder prediction 853 890 - -
Dere12g0032 897 FunFam FERONIA receptor-like kinase 214 409 - -
Dere12g0032 897 ProSiteProfiles Protein kinase domain profile. 536 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere12g0032 897 SUPERFAMILY Protein kinase-like (PK-like) 511 809 IPR011009 -
Dere12g0032 897 MobiDBLite consensus disorder prediction 841 897 - -
Dere12g0032 897 CDD STKc_IRAK 542 808 - -
Dere12g0032 897 ProSitePatterns Protein kinases ATP-binding region signature. 542 565 IPR017441 GO:0005524
Dere12g0032 897 CDD TM_EGFR-like 449 476 - -
Dere12g0032 897 Gene3D Transferase(Phosphotransferase) domain 1 613 824 - -
Dere12g0032 897 Pfam Malectin-like domain 32 408 IPR024788 -
Dere12g0032 897 PANTHER OS03G0124300 PROTEIN-RELATED 10 479 IPR046957 GO:0004672
Dere12g0032 897 SMART serkin_6 536 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0032 Dere-ChrDere12 320238 322931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g0032 18 897 Receptor kinase-like Gene Family AT3G51550 75.397 0.0 1342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere12g0032 Malectin_like 5.8e-45 CL0202