Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1947 ATGAAACTACAAGCGCACATTCCAGGACAGATGTCAGGGCAGGTACCTAATCAAGCAGGGTCCCAGTTACCTGGACTTACCCAGCCCAATCGAAATGCCCTCCCTCTTCAGATGCCAAATTTAGGTGGTGTTCCACGTTCAACCATCAATATGGACCCAGACATACTTAGAGCACGTTCTATTATGCAAGAGAAGATTTATGATATATTATTGCAACGGCAACAGCAGCCAGTAATAGAAGTAAATAGAAGAAGGTTGAAGGATCTTGCTAAACGCCTGGAGGAAGGCATGTTAAAAGCTGCATTCTCTAAGGAGGAGTACATGAACTTGGATACACTAGAGAGCCGTTTGTTTAATTTCATTAGACGATCATCTATTAATAGTCATAACCAACAATATCCACAGCATGTTAGCTCTTCTCCAATTGGTACAATGATACCAACACCTGGTATATCACATGTTGTTAATTCAAGCATGGTGGTTGCATCTTCTATGGAGGCCTCAATGATTGCTGCCACTGGATGTAATAGCATGACATCTACATCTGTCAATAGTGGAAGCATGTTTCCAACTGGTGGGTTTCATGGCAATTCCTTAAGTAGATCTGATGGTTTGTCAAATGGCTATCAGCAGTCTTCTACCAGCTTTTCCATTGGTTCTGGGGGAAGTATGTCATCAATGGGTGTACAGAGAATTGCAAGTCAGATGATTCCCACTCCTGGGTTTACCAGCAGCAATCACTCATATTTGAATGTAGAATCTTCTGATAATAGCAGTGTCTTTTCCAGTGTTGAATCTACAATGGTGTCACAGCCGCAGCAGCAGAAGCAGCATATTGGTGGCCAAAACAGTAATGTATTGCAGAACTTTGGCAGTCAAATGGGTAGTGGAATGAGATCTGGCTTACAGCAAAAATCTTTTTCATACTCAAATGGAGCTATGAGTAGTGGGTTAGGCTTGATTGGAAACAATATGCAAATTGCCAATGAATCTGGCACTTCTGATGGCTATGCCACTACTTATGCTAATTCCCCTAAACACTTACAGCAGCACTTTGATCAAAATCAGCAACAACCTGTGCAGGGTGATGGATTTGGATTGAGTAATGTTGACTCGGTTGCTTCTGGGAACTTTTATTCATCTGCAACTTCTTCTGGAACTGTGATGAACAGTCAGAATTTATGTCCAGTAAAATATCCTGCAATGTCCAAAACGAACTCTCTGATAAGTAGTCAGCCGAATTTGCACAGTATGCAGCAGGCTGCTCATCTGAAGTCACAAGCAATTAACCAGTTGGAGAAGTTAAATTTTCAGTCTTCTTTGACTTCAAGAGATGGCCTTCTGCATCCTCAACAGCAACAATTTCAGCAACGGCCCCAACATTTTCAACAGCCAGAGCAATATGCTCAACAGCAATTTCAACAGCCGGAGCAGTATGCTCGGCAGCAATTTCAACATAAGCTGCAAAGTCAGCAGCCTCAGCATTTGGTCAACAGTGATGCTTTCAGTCAGTCTCATATCTCTTCCAATTTAGAAGGCCAAGTGAAGTCTGAGCCTGGAGTTGAACACCATAATGAAGTGCTCAGTTCACAGGTTTCTGACCAGTTTCATATTTCTCAGATGCAAAACAAGTTCCGGCAGAACCCTACTGATGATTCTTCTGGGGCTGCCCAACAACATCCTTCTTTCCTGACTGGTCTGAATGATTTATCCTCAACAGCACCTCAGAACTCGCAACAAATGTTGCACCCACTTCAGTTGGTTTCAGAGCCTGAAAACAATTTTAGTTGTCTTCCAGTTGGGGCACAATCTAAATCAGCACTTCTAAATCAATGGAATTCTCAGTCACAAGATGGTAACCACATACCCGGGAATATGTCGCATGAGCAGCATCTCCACATGGATTTCCATCAGAGAATATCTAGGCAAGATGAAGCTCAATGCAATAATTCATCATCAGATGGATCTATTGTTGGTCAAGCTGTTGCTTCTAGAGGCTTAGCTGATGCACTAGACTCAAGTGGTGCTATCAAGAAAGCATATAGGAACCAACAGAGGTGGCTTTTATTTCTGCTTCATGCTCGACGTTGTCCTGCCCCAGAAGGACGATGCCAAGAGCGATACTGTTATAGTGCTCAGAAGTTATGTAGACACATAGATGGATGCAACCTGCCTCATTGTTCTTATCCCCGCTGTCATCATACCAGGCTATTGCTAATTCATTTCAGAAACTGCAAGGATCCATGTTGCCCTGTTTGTGTTTTTGTTCGAAATTATCGACGCTCCTTTCAACTTAAGCCTCAGACTCGGCCAGATTCAGATTCAGGAGTGCCTGTTGCAGTAAATGTATCTTGTAAAACCTACAATTCTGTAGTTTCATCACCTAGATTAATCCCAAAACCTGTGATTGAAACTTCAGCTGACCTGCAGCCATCTCTAAAACGTATGAAGATTGAGCAGTGTACCCAGTTCTTTAATCCAGAGAATGACGACTCTGCTATATCAGTTTCGGCAAACTGTGAATCTCATGTTTCCAAGGATGTCCAGTGCCAAGACTATCTCCATGGTGAGACATCTATGTCAATTAAATCTGAGCATACAGAAGTGAAGGCAGAAGTTCCAGTGCATTCCATACCCAACAATCTTAGTGAAGTGAAAATAAATAATGCTCATGACAGATGGCATGATGTTGAACCTGCTGCATATGATGAACCTGCTACTTTAGCTAGGCCAGAAAATATTAAAACTGAGAAAGAATCTGGGCCACATCAGCCAGAAAACTTTATCCAGCCATCTGAAAATGTGGCAGGAACAAAGTCTGGTAAGCCCAAAATAAAGGGAGTCTCATTGACTGAACTATTCACTCCAGAGCAAGTCAGGGAACACATCACTGGCCTAAGACAATGGGTTGGCCAAAGCAAAGCAAAAGCAGAAAAGAATCAAGCAATGGAGCATTTGATGAGTGAGAACTCCTGTCAGTTGTGTGCTGTAGAGAAGCTTACTTTTGAACCGCCACCTATTTATTGCTCAACTTGTGGAGCTCGCATTAAACGAAATGCTATGTATTATACCATGGGTGCTGGTGATACACGGCATTACTTTTGTATTCCATGCTATAATGAGGCTCGTGGAGACTCCATTGTTGTTGATGGAACCACCATTCCCAAGGCGAGGCTGGAGAAAAAGAAAAATGATGAAGAAACCGAGGAATGGTGGGTTCAATGTGATAAATGCGAAGCTTGGCAACATCAAATCTGTGCCTTATTTAATGGTCGAAGAAATGATGGGGGACAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCAAACCCTTACCCCAAAGTGCTGTTCTTGGGGCCAAGGACTTGCCTAGAACTATTCTCAGTGACCACATAGAGCAACGGTTGTTTAGGCGACTAAAGCAAGAAAGACAAGAGAGGGCAAGGCTTCAGGGGAAAAGTTATGATGAGGTGCTTGGGGCTGAAGCGCTTGTTGTAAGAGTGGTGTCATCTGTGGACAAGAAGTTAGAAGTGAAACAACGATTTTTGGAAATTTTTCAGGAAGAAAATTACCCAACAGAATTCCCCTATAAATCAAAGGTAATTTTACTGTTTCAGAAGATTGAAGGTGTGGAAGTATGCCTGTTTGGCATGTATGTTCAAGAATTTGGATCTGAATGTCAATTCCCTAATCAGCGTCGAGTGTATCTTTCATATCTCGACTCTGTGAAGTATTTTAGGCCTGAAGTTAAAGCAGTGACTGGAGAGGCTCTTAGGACATTTGTTTATCATGAAATTCTGATCGGATATCTTGAATATTGTAAGATACGTGGTTTTACAAGCTGCTATATTTGGGCCTGCCCTCCATTGAAGGGTGAAGATTATATTTTATATTGTCATCCGGAAATTCAGAAAACTCCAAAATCTGATAAGCTTCGGGAGTGGTACCTATCAATGTTAAGAAAAGCTACCAAGGAGAATATTGTGGTCGATCTCACCAACTTATACGACCATTTCTTTGTATCTACGGGTGAATGTAGAGCTAAGGTTACCGCTGCAAGACTTCCTTATTTTGATGGTGACTACTGGCCAGGGGCTGCAGAGGATTTGATTTATCAGCTCCGCCAAGAAGAAGATGGCAGAAAACAGAATAAGAAAGGAACAATTAAAAAAACTATAACAAAAAGAGCTTTAAAGGCATCTGGACAGTCAGATCTTTCTGGAAATGCCTCAAAAGATCTACTCCTAATGCATAAACTTGGTGAAACCATTAGCCCAATGAAGGAAGATTTTATCATGGTTCATTTGCAGCATGTATGCAGTCACTGTTGTATCTTAATGGTGTCAGGCAACCGTTGGGTTTGCAACCAGTGCAAGAATTTTCAGATTTGTGATAAGTGTTATGAAGCAGAACAAAAGCGTGAAGAAAGAGAAAGGCATCCTGTTAATCAGAGGGAGAAGCATACCCTTTATCCAATTGAAATTTCTGATGTACCAGCTGATACAAAGGACAAAGACGAGATTCTTGAGAGTGAATTTTTTGACACTAGGCAGGCATTTTTGAGTCTCTGTCAGGGAAATCATTATCAGTATGATACTCTTAGGCGGGCCAAGCATTCCTCTATGATGGTCCTTTATCATCTTCATAATCCAACTGCTCCTGCCTTTGTGACAACTTGTAATATATGTCATCTTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCTGAATATGATGTATGCAATGCGTGTTATCAAAAGGATGGAGGCATTGATCATCCTCATAAGTTGACAAATCATCCGTCAATTGCTGATCGCGATGCTCAGAACAAAGAAGCGAGGCAACTTAGAGTGTTGCAGTTACGGAAAATGCTTGATCTTCTTGTGCATGCATCCCAATGTCGTTCTGCACATTGCCAGTATCCAAACTGTCGCAAAGTGAAGGGGCTTTTTCGCCATGGGATGCAATGCAAAACACGTGCTTCTGGAGGCTGTGTTCTTTGCAAGAAAATGTGGTATTTGCTGCAACTTCATGCCCGTGCTTGCAAAGAATCTGAATGCCATGTACCACGTTGCAGAGATTTAAAAGAACATTTGAGGAGGTTGCAACAACAGTCTGACTCTCGGCGAAGAGCGGCTGTGATGGAGATGATGAGACAGAGAGCTGCTGAAGTTGCTAACAATGCAGGATAA 5223 0.4214 MKLQAHIPGQMSGQVPNQAGSQLPGLTQPNRNALPLQMPNLGGVPRSTINMDPDILRARSIMQEKIYDILLQRQQQPVIEVNRRRLKDLAKRLEEGMLKAAFSKEEYMNLDTLESRLFNFIRRSSINSHNQQYPQHVSSSPIGTMIPTPGISHVVNSSMVVASSMEASMIAATGCNSMTSTSVNSGSMFPTGGFHGNSLSRSDGLSNGYQQSSTSFSIGSGGSMSSMGVQRIASQMIPTPGFTSSNHSYLNVESSDNSSVFSSVESTMVSQPQQQKQHIGGQNSNVLQNFGSQMGSGMRSGLQQKSFSYSNGAMSSGLGLIGNNMQIANESGTSDGYATTYANSPKHLQQHFDQNQQQPVQGDGFGLSNVDSVASGNFYSSATSSGTVMNSQNLCPVKYPAMSKTNSLISSQPNLHSMQQAAHLKSQAINQLEKLNFQSSLTSRDGLLHPQQQQFQQRPQHFQQPEQYAQQQFQQPEQYARQQFQHKLQSQQPQHLVNSDAFSQSHISSNLEGQVKSEPGVEHHNEVLSSQVSDQFHISQMQNKFRQNPTDDSSGAAQQHPSFLTGLNDLSSTAPQNSQQMLHPLQLVSEPENNFSCLPVGAQSKSALLNQWNSQSQDGNHIPGNMSHEQHLHMDFHQRISRQDEAQCNNSSSDGSIVGQAVASRGLADALDSSGAIKKAYRNQQRWLLFLLHARRCPAPEGRCQERYCYSAQKLCRHIDGCNLPHCSYPRCHHTRLLLIHFRNCKDPCCPVCVFVRNYRRSFQLKPQTRPDSDSGVPVAVNVSCKTYNSVVSSPRLIPKPVIETSADLQPSLKRMKIEQCTQFFNPENDDSAISVSANCESHVSKDVQCQDYLHGETSMSIKSEHTEVKAEVPVHSIPNNLSEVKINNAHDRWHDVEPAAYDEPATLARPENIKTEKESGPHQPENFIQPSENVAGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKAKAEKNQAMEHLMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYYTMGAGDTRHYFCIPCYNEARGDSIVVDGTTIPKARLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKQERQERARLQGKSYDEVLGAEALVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKIRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKATKENIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTIKKTITKRALKASGQSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHVCSHCCILMVSGNRWVCNQCKNFQICDKCYEAEQKREERERHPVNQREKHTLYPIEISDVPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICHLDIETGQGWRCEVCPEYDVCNACYQKDGGIDHPHKLTNHPSIADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMQCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1947 1740 Gene3D - 1438 1496 IPR043145 -
Dere11g1947 1740 FunFam Histone acetyltransferase of the CBP family 12 1438 1497 - -
Dere11g1947 1740 SUPERFAMILY FYVE/PHD zinc finger 1068 1108 IPR011011 -
Dere11g1947 1740 SUPERFAMILY TAZ domain 1624 1707 IPR035898 -
Dere11g1947 1740 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1124 1560 IPR031162 GO:0004402
Dere11g1947 1740 Pfam Zinc finger, ZZ type 1564 1603 IPR000433 GO:0008270
Dere11g1947 1740 ProSiteProfiles Zinc finger TAZ-type profile. 675 756 IPR000197 -
Dere11g1947 1740 FunFam Histone acetyltransferase HAC1 1561 1612 - -
Dere11g1947 1740 MobiDBLite consensus disorder prediction 544 578 - -
Dere11g1947 1740 ProSitePatterns Zinc finger ZZ-type signature. 1567 1594 IPR000433 GO:0008270
Dere11g1947 1740 CDD PHD_HAC_like 1034 1106 - -
Dere11g1947 1740 Gene3D TAZ domain 1619 1736 IPR035898 -
Dere11g1947 1740 Gene3D - 1002 1062 IPR038547 -
Dere11g1947 1740 SMART PHD_3 1008 1107 IPR001965 -
Dere11g1947 1740 MobiDBLite consensus disorder prediction 451 480 - -
Dere11g1947 1740 Pfam Histone acetylation protein 1168 1387 IPR013178 GO:0004402|GO:0006355|GO:0016573
Dere11g1947 1740 Pfam TAZ zinc finger 1632 1702 IPR000197 -
Dere11g1947 1740 Pfam TAZ zinc finger 685 753 IPR000197 -
Dere11g1947 1740 Coils Coil 1140 1160 - -
Dere11g1947 1740 ProSiteProfiles Zinc finger ZZ-type profile. 1562 1615 IPR000433 GO:0008270
Dere11g1947 1740 ProSiteProfiles Zinc finger TAZ-type profile. 1622 1705 IPR000197 -
Dere11g1947 1740 SUPERFAMILY TAZ domain 679 760 IPR035898 -
Dere11g1947 1740 Gene3D - 1561 1612 IPR043145 -
Dere11g1947 1740 MobiDBLite consensus disorder prediction 1 22 - -
Dere11g1947 1740 Gene3D TAZ domain 675 777 IPR035898 -
Dere11g1947 1740 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1063 1107 IPR013083 -
Dere11g1947 1740 ProSiteProfiles Zinc finger ZZ-type profile. 1442 1505 IPR000433 GO:0008270
Dere11g1947 1740 SMART zz_5 1441 1485 IPR000433 GO:0008270
Dere11g1947 1740 SMART zz_5 1561 1607 IPR000433 GO:0008270
Dere11g1947 1740 FunFam Histone acetyltransferase HAC1-like protein 1619 1736 - -
Dere11g1947 1740 SUPERFAMILY RING/U-box 1422 1495 - -
Dere11g1947 1740 ProSitePatterns Zinc finger PHD-type signature. 1035 1106 IPR019786 -
Dere11g1947 1740 Pfam PHD-finger 1065 1107 IPR019787 -
Dere11g1947 1740 SUPERFAMILY RING/U-box 1543 1610 - -
Dere11g1947 1740 MobiDBLite consensus disorder prediction 923 937 - -
Dere11g1947 1740 PANTHER CBP/P300-RELATED 85 479 IPR013178 GO:0004402|GO:0006355|GO:0016573
Dere11g1947 1740 MobiDBLite consensus disorder prediction 916 943 - -
Dere11g1947 1740 SMART KAT11_2 1157 1454 IPR013178 GO:0004402|GO:0006355|GO:0016573
Dere11g1947 1740 SMART TAZ_2 678 756 IPR000197 -
Dere11g1947 1740 SMART TAZ_2 1625 1703 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1947 Dere-ChrDere11 33352905 33383224 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Dere11g1947 HAT_KAT11 1.9e-31 CL0257