Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1946 ATGAACCTGCAGGCGCACATTCCAGGGAGGTTGTCAAGTCAGATACCTAATCAAGCGGGGGCCCAATTGCCTGGATTGACTCAGCCAAATGGAACTGCCCTCCCTCCTCAGATGCCAAATTTAGGTGGTGTTCCACGTTCAACCATAAATATGGACCCCGAATTTCTGAGAGTACGCTCGTTTATGCAAGAGAAGATCTATGAGATATTATTGCAGCGACAGCAGCAGCCAGTTCCAGAACTTAATAGAAGAAGGTTTAAGGATCTTGCTAAACGCCTGGAGGAAGCGATGTTAAAAGCTGCATTCTCTAAGGAGGAGTACATGAACTTGGAAACATTAGAGAGCCGTTTGTTTAATTGCATCAGACGATCATCTATGAATAATCATAACCAACAATATCCACAGCATGTCAGCTCTTCTCCAGTTGGTACAATGATACCAACACCTGGCATGTCACATGTTGTCAATTCAAGCATAGTGGTTACATCTTCTGTAGAGGCCTCAATGATTTCTGCCAGTGGATGTAATAGCATAGCATCTACATCAGTCAATAGCGGAAACATGTTTCTAAGTGGCAGCTTGCCTGGCAATTCCTTAAGTAGATCTGATGGTTTGTCTAATGGCTATCAGCAGTCTTCTACCAGCTTTTCCATTGGTTCTGGGGGAAATATGTCATCAATGGGTGTGCAGAGAATCGCAAGCCAGATGATTCCCACTCCTGGATTTACAGGCAGCAATCATTCATACATGAATGCAGATTCTTCTAATTATAGCGGTGGCTTTTCCAGTGTTGAATCTACTATGGTATCACAGGCGCAGCAGCAGAAGCAGCATATTGGTGGCCAAAACAATAACGTATTGCAGAACCTTGGCGGCCAAATTGGTAGTGGAATGAGGTCTGGTTTACAGCAAAAATCTTTTGCATACTCAAATGGAGCTATAAGCAGTGGGTTAGGCTTGACTGGAAACAATTTGCAACTTGCAAATGAATCTGGCACTTCTGATGGCTATGCCACAACTTTTGCCAGCTCACCTAAACAATTACAGCAGCACTTTGATCAAAATCAGCAACCACCTGTGCAGGGTGATGGATATGGATTGAATAATGTTGACTCATTTGCTTCTGGAAACTTTTATTCATCTGCAACATCTTCTGGATCTATGATGAGCAGTCAGAACTTGAATTCAGTAAAATTGCCTGCAATATCCAAATCCAGCTCGTTGATAAGTAGTCATTCAAATTTGCATGGTATGCAGCAGGCTGCTCATTTAAAGTCTCAAGCAATTAATCAGTTAGAAAAGTTGAATTTTCAATCTTCTTTGACTTCAAGAGATGGCCTTCTGCATCCTCAACAGCAATATCAGCAACGGCCCCAACATGTTCAACAGCCGGAGCAATATGCTCAACAGCAATTTCAACTTAAGCTGCAAAATCAACAGCCTCAGCATTTGGAGAACAGTGATGCTTTCGGTCAGTCTCAGCTTGCTTCTGATTTAGAAGGCCAAGTGAAGTCTGAGCCTGGAGTTCAACATCATAAAGAAGTGCTTAATTCCCAGGTTTCTGAACAGTGTCATATTTCTGGGATGCAAAATCAGTTCCAGCAGAACTCTACTGAAGACTGCCCTAGGAGTGCACAATATCTTTCTTTTCCAACTGCTCAGAATGATTTGTCCTCTACTGCTCCTCAGAATCCGCAACAGATGTTACACCCACATCATTTGACTTCAGAGTCTGGAAATAATTTTAGCTCTCTTTCAGTTGGGACACAGTGTAAATCAGCACCATTAAATCAATGGGATTCTCACTCACAGGATGTTAATCACATACCTGGGAATATGTCACATGAGCAGCATCTCCACTCTGATTTTCATCAGAGAATATCAAGTCAAGGTGAAGCTCAATGCAATAATTTATCATCAGATGGATCTATTGTTGGTCAAGCTGTTGCTTCTAGAGGCTTGGCTGAGCAACTAGACTCAGGCGGTGCTATCAAGAAAGCGCACAGAAACCAACAGAGGTGGCTTTTATTTCTGCTTCATGCTCGACGGTGTCCTGCTCCTGAAGGACAATGCCAAGAGCGATATTGTGATAGTGCCCAGAAGTTATGTAGACACATAGAAGGATGTGACCTGACTCACTGTCCATATCCCCGCTGTCATCATACCAGGCTCTTGCTTCGTCATTTTAGAAATTGCAAGGATCCATGTTGCCCTGTTTGTGTTTTTGTTCGCAATTATCGACGATCGTGTAAACTTAAACCTCAGATTTGGCCAGTTCCTAATTCAGGTATGCCAATTGCTGTAAATGGATCCTGCAAATCATATAATACTGAAGTTCCGTCACCTCGGTTGATCCCAAAGCCTCCACTACCGGTGATTGAAAATTCAGAAGAGCTGCAGCCATCTCTAAAACGTATGAAGATTGAGCAGTGTACCCAGTCCTTGGATCCTGAGAACAACAACTCTACTATTTCAATTTCTGCAAACTGTCATTCTCATGTTTCCAATGGTGCCCAGTGCCTAGACTGTCCCCATGGTGAGACATCTATGTCAATTAAATCTGAGATTACAGAAGTTAAGGAAGAAGCTGTGGTGCATTTGGCACGCGAGAATGTTACTGAAGTGAATATAAGTAGGGTGGATGGCAGAGGGCCTTCTAGTGAGCCTGTCAAATATGATAAGCCTGCTATTGTAGCTAAGCAAGAAAATATTAAAACAGAGAAAGAAACTGGACATGATAAGCCAGTAAGTGCGACCCAATCATCCGAAAATGCAGTGGGAACCAAATCAGGTAAGCCCAAAATTAAAGGGGTCTCAATGACTGAACTATTCACTCCAGAGCAAGTCAGGGAACATATCACTGGCCTCAGGCAGTGGGTTGGCCAAAGCAAAGCAAAAGCAGAAAAGAATCAGGCCATGGAGCATTCGATGAGTGAGAACTCCTGTCAGTTGTGTGCTGTAGAGAAGCTTACTTTTGAGCCGCCACCTATTTATTGCTCAACTTGTGGAGCTCGCATTAAACGAAATGCTATGTATTATACCATGGGTGCTGGTGATACACGACATTATTTTTGTATTCCATGCTATAATGAGGCTCGTGGAGACACCATTGTTGTTGATGGAACTACCATTCCCAAGGCGAGGCTGGAGAAAAAGAAAAACGATGAAGAAACCGAGGAATGGTGGGTTCAATGTGATAAATGCGAAGCTTGGCAACATCAAATCTGTGCCTTATTTAATGGTCGAAGAAATGATGGGGGACAAGCTGAATACACTTGCCCTAACTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCAAACCCTTACCCCAAAGTGCTGTTCTTGGGGCCAAGGACTTGCCTAGAACTATTCTCAGTGACCACATAGAGCAACGGTTGTTTAGGCGACTAAAGCAAGAAAGACAAGAGAGGGCAAGGCTTCACGTGAAAAGTTATGATGAGGTGCCTGGTGCTGAATCACTTGTAGTTAGAGTTGTGTCATCTGTAGACAAGAAGTTAGAAGTGAAACAGCGTTTTCTGGAAATATTTCAGGAAGAAAATTACCCAACAGAATTCCCCTATAAATCAAAGGTAATTTTGTTGTTTCAGAAGATTGAAGGTGTGGAAGTATGCCTGTTTGGCATGTATGTTCAAGAATTTGGATCTGAATGTCAATTCCCTAATCAGCGTCGGGTGTATCTTTCATATCTCGACTCTGTGAAGTATTTTAGGCCTGAAGTTAAAGCAGTGACTGGAGAGGCTCTTAGGACATTTGTTTATCATGAAATACTGATCGGATATCTCGAATATTGTAAGATACGTGGTTTTACAAGCTGCTATATTTGGGCCTGTCCTCCATTGAAGGGTGAAGATTATATTTTATATTGTCATCCGGAAATTCAGAAAACTCCCAAATCTGATAAGCTTCGGGAGTGGTACCTATCAATGTTAAGAAAAGCTGCCAAGGAGAATATTGTGGTTGATCTCACCAACTTATACGACCATTTCTTTGTATCTACTGGTGAATGTAGAGCTAAGGTTACTGCTGCAAGACTTCCTTATTTTGATGGTGACTACTGGCCAGGGGCTGCAGAAGATTTGATTTATCAGCTCCGCCAAGAAGAAGATGGCAGAAAACAGAATAAGAAAGGAACAACTAAAAAAACTATAACAAAAAGAGCTTTAAAGGCATCTGGACAGTCGGATCTATCTGGAAATGCCTCAAAAGATCTACTCCTAATGCATAAACTCGGTGAAACCATTAGCCCGATGAAGGAAGATTTTATCATGGTTCATCTGCAGCATGCATGCAGTCACTGTTGTATTTTAATGGTGTCAGGCAGCCGTTGGGTTTGCAACCAGTGCAAGAATTTTCAGATTTGTGATAAGTGTAACGAAGCTGAACAAAAACGTGAAGAAAGAGAAAGGCATCCTGTTAATCAGAGGGAGAAGCATACCCTTTACCCTATTGAAATTACTGATGTACCTGCTGATACAAAGGACAAAGATGAGATTCTTGAGAGTGAATTTTTTGACACAAGACAGGCATTTCTGAGTCTCTGTCAGGGAAACCATTATCAGTATGATACTCTGAGGCGGGCCAAGCATTCATCAATGATGGTCCTCTATCATCTTCATAATCCAACTGCTCCTGCCTTTGTGACAACTTGCAATATATGTTATCTTGACATAGAAACTGGTCAAGGTTGGCGTTGCGAAATTTGCCCTGATTATGATGTATGCAATGCTTGTTATCAAAAGGATGGTGGCATTGATCATCCTCATAAGTTGACAAATCATCCATCAATGGCTGATCGCGATGCCCAAAACAAAGAAGCTAGGCAGCTTCGAGTGTTGCAGCTACGGAAAATGCTTGATCTTCTTGTTCATGCATCACAATGTCGTTCTGCGCATTGCCAGTACCCCAATTGTCGCAAAGTGAAGGGGCTTTTTCGCCATGGGATACAATGCAAAACACGTGCCTCTGGGGGCTGTGTTCTGTGCAAGAAAATGTGGTATTTGCTTCAACTTCATGCTCGAGCTTGCAAAGAATCTGACTGTCATGTACCACGTTGCAGAGATTTAAAAGAACATTTAAGGAGGTTGCAGCAGCAGTCTGACTCTCGGCGAAGAGCAGCTGTGATGGAGATGATGAGACAGAGAGCGGCAGAAGTTGCCAACAATGCAGGATGA 5193 0.426 MNLQAHIPGRLSSQIPNQAGAQLPGLTQPNGTALPPQMPNLGGVPRSTINMDPEFLRVRSFMQEKIYEILLQRQQQPVPELNRRRFKDLAKRLEEAMLKAAFSKEEYMNLETLESRLFNCIRRSSMNNHNQQYPQHVSSSPVGTMIPTPGMSHVVNSSIVVTSSVEASMISASGCNSIASTSVNSGNMFLSGSLPGNSLSRSDGLSNGYQQSSTSFSIGSGGNMSSMGVQRIASQMIPTPGFTGSNHSYMNADSSNYSGGFSSVESTMVSQAQQQKQHIGGQNNNVLQNLGGQIGSGMRSGLQQKSFAYSNGAISSGLGLTGNNLQLANESGTSDGYATTFASSPKQLQQHFDQNQQPPVQGDGYGLNNVDSFASGNFYSSATSSGSMMSSQNLNSVKLPAISKSSSLISSHSNLHGMQQAAHLKSQAINQLEKLNFQSSLTSRDGLLHPQQQYQQRPQHVQQPEQYAQQQFQLKLQNQQPQHLENSDAFGQSQLASDLEGQVKSEPGVQHHKEVLNSQVSEQCHISGMQNQFQQNSTEDCPRSAQYLSFPTAQNDLSSTAPQNPQQMLHPHHLTSESGNNFSSLSVGTQCKSAPLNQWDSHSQDVNHIPGNMSHEQHLHSDFHQRISSQGEAQCNNLSSDGSIVGQAVASRGLAEQLDSGGAIKKAHRNQQRWLLFLLHARRCPAPEGQCQERYCDSAQKLCRHIEGCDLTHCPYPRCHHTRLLLRHFRNCKDPCCPVCVFVRNYRRSCKLKPQIWPVPNSGMPIAVNGSCKSYNTEVPSPRLIPKPPLPVIENSEELQPSLKRMKIEQCTQSLDPENNNSTISISANCHSHVSNGAQCLDCPHGETSMSIKSEITEVKEEAVVHLARENVTEVNISRVDGRGPSSEPVKYDKPAIVAKQENIKTEKETGHDKPVSATQSSENAVGTKSGKPKIKGVSMTELFTPEQVREHITGLRQWVGQSKAKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCSTCGARIKRNAMYYTMGAGDTRHYFCIPCYNEARGDTIVVDGTTIPKARLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFRRLKQERQERARLHVKSYDEVPGAESLVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKIRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLSMLRKAAKENIVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETISPMKEDFIMVHLQHACSHCCILMVSGSRWVCNQCKNFQICDKCNEAEQKREERERHPVNQREKHTLYPIEITDVPADTKDKDEILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEICPDYDVCNACYQKDGGIDHPHKLTNHPSMADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGIQCKTRASGGCVLCKKMWYLLQLHARACKESDCHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1946 1730 Gene3D - 1428 1486 IPR043145 -
Dere11g1946 1730 Pfam TAZ zinc finger 672 740 IPR000197 -
Dere11g1946 1730 Pfam TAZ zinc finger 1622 1692 IPR000197 -
Dere11g1946 1730 MobiDBLite consensus disorder prediction 902 933 - -
Dere11g1946 1730 ProSiteProfiles Zinc finger ZZ-type profile. 1432 1495 IPR000433 GO:0008270
Dere11g1946 1730 ProSiteProfiles Zinc finger TAZ-type profile. 662 743 IPR000197 -
Dere11g1946 1730 ProSiteProfiles Zinc finger TAZ-type profile. 1612 1695 IPR000197 -
Dere11g1946 1730 SUPERFAMILY TAZ domain 1614 1697 IPR035898 -
Dere11g1946 1730 SMART TAZ_2 1615 1693 IPR000197 -
Dere11g1946 1730 SMART TAZ_2 665 743 IPR000197 -
Dere11g1946 1730 Coils Coil 86 113 - -
Dere11g1946 1730 Gene3D TAZ domain 1609 1726 IPR035898 -
Dere11g1946 1730 SMART KAT11_2 1149 1444 IPR013178 GO:0004402|GO:0006355|GO:0016573
Dere11g1946 1730 MobiDBLite consensus disorder prediction 1378 1402 - -
Dere11g1946 1730 ProSitePatterns Zinc finger PHD-type signature. 1025 1096 IPR019786 -
Dere11g1946 1730 Gene3D - 1551 1603 IPR043145 -
Dere11g1946 1730 CDD PHD_HAC_like 1024 1096 - -
Dere11g1946 1730 Pfam Histone acetylation protein 1154 1375 IPR013178 GO:0004402|GO:0006355|GO:0016573
Dere11g1946 1730 SMART PHD_3 998 1097 IPR001965 -
Dere11g1946 1730 Gene3D - 992 1052 IPR038547 -
Dere11g1946 1730 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1053 1097 IPR013083 -
Dere11g1946 1730 MobiDBLite consensus disorder prediction 1 32 - -
Dere11g1946 1730 SMART zz_5 1431 1475 IPR000433 GO:0008270
Dere11g1946 1730 SMART zz_5 1551 1597 IPR000433 GO:0008270
Dere11g1946 1730 SUPERFAMILY RING/U-box 1412 1483 - -
Dere11g1946 1730 SUPERFAMILY FYVE/PHD zinc finger 1058 1098 IPR011011 -
Dere11g1946 1730 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1114 1550 IPR031162 GO:0004402
Dere11g1946 1730 Pfam Zinc finger, ZZ type 1554 1593 IPR000433 GO:0008270
Dere11g1946 1730 Pfam PHD-finger 1055 1097 IPR019787 -
Dere11g1946 1730 ProSitePatterns Zinc finger ZZ-type signature. 1557 1584 IPR000433 GO:0008270
Dere11g1946 1730 FunFam Histone acetyltransferase HAC1 1551 1602 - -
Dere11g1946 1730 MobiDBLite consensus disorder prediction 344 367 - -
Dere11g1946 1730 ProSiteProfiles Zinc finger ZZ-type profile. 1552 1605 IPR000433 GO:0008270
Dere11g1946 1730 FunFam Histone acetyltransferase HAC1-like protein 1609 1726 - -
Dere11g1946 1730 SUPERFAMILY TAZ domain 668 747 IPR035898 -
Dere11g1946 1730 Gene3D TAZ domain 661 748 IPR035898 -
Dere11g1946 1730 SUPERFAMILY RING/U-box 1533 1601 - -
Dere11g1946 1730 PANTHER CBP/P300-RELATED 86 466 IPR013178 GO:0004402|GO:0006355|GO:0016573
Dere11g1946 1730 MobiDBLite consensus disorder prediction 554 588 - -
Dere11g1946 1730 FunFam Histone acetyltransferase of the CBP family 12 1428 1487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1946 Dere-ChrDere11 33310351 33323570 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Dere11g1946 HAT_KAT11 4.9e-32 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1946 11 33310351 33323570 Dere11g1946 11 33310351 33323570 ECH