Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1933 ATGAAACTTGCCACCTATTTTGTTCCAAAAATTATTTCACGATTGACAGGCTCTCTGAAGTTAGCCTGCATTGATCCTACGAGCAGCACGATTAAACACCAATTGTACCACAACTCTGCACAGCATGAGAAGGCAGGAATGAGAAGCATGAGGAAGAAACTGATGGAATCGGGAGATAGCACAGTGCAGTTGCAGTCATTGCTTGCCGGAGAGTTATCGGACGGCGGCAGAGGCCAGGATTCAATGGAGCACGATGTTCCCAAAGGATTTATAGCTGTTCTTGTGGGGCCACACCTTCGGAGGTTTGTTATTCCAATAAGCTTCTTGACGATGCCTGAGTTGAGTGTTCTGATGGAGAGGGTGGCTGAGGAGTTCGGGTGTAACTATGATGGTGCTATTGAAATTCCTTGCGAAGAAGACCATTTTGAGCAAATCTTGTTCACGTGTCTCGTAAGATACCAGATGATGATTTCCTCTAAGAACCGTAAGAAACTTCTTAAGATGCCACTAAACAAATAA 519 0.447 MKLATYFVPKIISRLTGSLKLACIDPTSSTIKHQLYHNSAQHEKAGMRSMRKKLMESGDSTVQLQSLLAGELSDGGRGQDSMEHDVPKGFIAVLVGPHLRRFVIPISFLTMPELSVLMERVAEEFGCNYDGAIEIPCEEDHFEQILFTCLVRYQMMISSKNRKKLLKMPLNK 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1933 172 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 60 146 IPR003676 GO:0009733
Dere11g1933 172 Pfam Auxin responsive protein 66 146 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1933 Dere-ChrDere11 33132230 33132748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1933 84 146 Calmodulin-binding Proteins AT5G20810 53.968 3.34e-18 76.3