Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1913 ATGAAAATGAAAGCAAGGATTTGTGAGCTGTGTAACCAGGAAGCCTCCCTGTATTGTGCCTCCGATTCTGCGTTTCTCTGCTGCAATTGCGATGCCAGGGTTCACCAGGCCAACTTTCTAGTAGCTCGCCATATCCGAGAGGTCCTCTGCCGCAATTGCAAGTGTTTCGCCGGTAGCCAGGTCTCCGGCAGCATAGCTCCACCCGCAACGTCGGCCTGTCGTTCCTGCTCTCTGGAGAATCCTTCCAGCGATGACGATTCCTTATCATCGTCTTCCATGTCGGCTTGCGTTTCCAGCACCGAGTCTTGCGCTACTGCTCCGAAGAAGACGAGGACGGCGAATGATCGGCGCCGGTCCGAGACGGTCGTTGCAGTTTCTACCAGTTCCGTCACGGACGAGAACCACGATCCTCCGGCGAGAATGACGACGAAAGGGAAGAAGAATGCGAGATCGTGCGCGGCAGAGGAGGTTTTGGTGAATTGGAGCAGAAGGTTTGGGGTGAATGGAAACTACGCAGCTTCGTTGGCGTCGCCGGCGTTGGGAAAGTTGATGACGGTTGTTCCGTTCAGAGTGGCGGTGGCGACGTCGTTTTGGTTCGGGTTGAGATTTTGCGGAGACGGGTCGTTGCGTACGGTTCAGAATCTGAGGAGGTTAGAGGAATTGTCGAAGGTGCCAGGTAAGGTGATCGTGGCGGCTGAGGAGAAGCTGACACGTGTATTGAGACCCAGAAGAGCAAGGCGCGAATTGGAAGAAGGGTGGGCCGAATGCTAG 771 0.5538 MKMKARICELCNQEASLYCASDSAFLCCNCDARVHQANFLVARHIREVLCRNCKCFAGSQVSGSIAPPATSACRSCSLENPSSDDDSLSSSSMSACVSSTESCATAPKKTRTANDRRRSETVVAVSTSSVTDENHDPPARMTTKGKKNARSCAAEEVLVNWSRRFGVNGNYAASLASPALGKLMTVVPFRVAVATSFWFGLRFCGDGSLRTVQNLRRLEELSKVPGKVIVAAEEKLTRVLRPRRARRELEEGWAEC 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1913 256 CDD Bbox1_BBX-like 7 46 - -
Dere11g1913 256 MobiDBLite consensus disorder prediction 107 147 - -
Dere11g1913 256 ProSiteProfiles Zinc finger B-box type profile. 3 49 IPR000315 GO:0008270
Dere11g1913 256 MobiDBLite consensus disorder prediction 119 136 - -
Dere11g1913 256 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 102 - -
Dere11g1913 256 SMART bboxneu5 3 49 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1913 Dere-ChrDere11 32991262 32992032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1913 7 255 C2C2-CO-like Transcription Factor Family AT3G21150 36.187 4.53e-32 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere11g1913 zf-B_box 1.6e-05 No_clan