Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1909 ATGACCTCCGCATCTCGAGGTTGCAACGGCTCCGCCTCCAATGGTCTTGTCACCGTCGCCATCGAAGTGCATCCTGACGATCCTCCCCATCCCCTTCCCTCCGGCAACCACGACATCGATATGGAAGACGACGACGACGACGACTTGGTGGTGAATCCGGATGATCCTTTCGATATTGGTCACACCAAGAATGCGCCCCCCGAGACCCTCCGCCGATGGAGACAAGCAGCACTTGTGCTCAATGCTTCCCGGCGTTTTCGTTACACTCTGGACTTGAACAAGGAAGAAGAGAAACAACAAAAGAAAAACTTGATTAGAGCCCATGCACAAGTCATAAGAGCAGCATTGCTATTCAAATTGGCGGGTGAACGTGAACTAGTGATTACACCAGCGGCATCCCCAGCTCGGGTCAGTGTCGGTGATTATGTAATTGGACTCGAAGAACTTGTCTCAATGTCTAAGGATCATAAAGTTTCTGCTTTAGAGCATTACGGAGGGGTTAAAGGCTTGTCAAATTTACTAAAATCAAGTCCCGAGAAAGGGATTAATGGGTGTGATGATGATTTATTAAGAAGGAGAACTGCATTTGGAACAAATACATATCCTCGGAAAAAAGGGAGAAGTTTCTTTAGGTTTCTATGGGAAGCTTGGCAAGATCTGACCCTAATCATATTGATTATAGCAGCTGCAGTGTCATTAGCACTTGGAATAAAAACAGAGGGTGTAAAAGAAGGGTGGTATGATGGAGGAAGCATTGCTTTCGCAGTTTTTCTTGTCATTGTAGTTACAGCTGTCAGTGATTATCGGCAATCTCTGCAGTTTCAGAATTTGAATGCAGAGAAACAAAATATACAATTAGAGGTCGTTAGAGGTGGTAGAATAGTAAAGATATCCATATTTGACATTGTTGTTGGTGACGTTGTGCCTCTTAAAATAGGAGATCAGGTCCCTGCTGACGGAGTTTTAATCACTGGCCACTCACTTGCTGTTGATGAATCCAGTATGACTGGTGAAAGCAAGATTGTTCACAAGGATCACAAAGCACCCTTTTTAATGTCTGGCTGCAAGGTAGCCGATGGAGTTGGTACTATGCTGGTAACCAGTGTTGGTATCAATACTGAGTGGGGACTGTTGATGGCAAGTATCTCAGAGGACACAGGGGAAGAGACTCCGTTACAGGTACGTTTGAATGGAGTCGCGACTTTTATTGGCATAGTTGGCCTTTCGGTAGCTGTATCTGTGCTGGTGGTCCTCGTAGGGAGATACTTTTCTGGCAACACGAGGGATCTAGATGGAAATGTCCAATTTGTTAGTGGAAAGACTAGTGTTAGTAATGCAGTAGACGGGGTCATCAAAATTTTTACCATAGCAGTCACAATTGTGGTTGTTGCAGTGCCTGAAGGCCTTCCGTTAGCTGTTACCTTAACCCTGGCTTACTCAATGCGAAAGATGATGGCAGACAAAGCCTTGGTTCGAAGGCTCTCAGCCTGCGAAACTATGGGCTCTGCAACAACAATTTGCAGTGATAAGACGGGAACATTGACATTGAATCAGATGACTGTGGTTGAGGCATATGTTGGGGGGAAGAAAAGAAATCTACCAGATGACATATCAAACTTGCACCCAGAAGTTTTATCTCTAATAAATGAGGGCATTGCACAGAATACTAGTGGAAATGTTTTTGAGCCTAAGGGCGATGGAGAAGTAGAGATTTCGGGATCTCCTACGGAGAAGGCAATCCTTTCTTGGGCGGTCAAGTTGGGAATGAAATTCAGTCTTATCAAATCAAATTCAACAATTCTACATGTCTACCCCTTCAATTCTGAGAAAAAACGAGGTGGTGTTGTGCTGAAGCTGGCGGACTCTAGTGTACATATACATTGGAAAGGAGCTGCGGAGATAGTTCTAAGCTCATGTACTCAATATCTTGACTCAAATGGTCAATTGCAATCTATTGATAAAGAGGATTTCAAGGAGGCTATTGATGACATGGCTGCTCGCAGCTTGCGGTGTGTTGCCATCGCATACAGATCATATGAAATGGACAAAGTTCCCTCCAATGAGGAGGATTTGGCCCAGTGGTCCTTACCGGAGCATGAGCTTGTTTTGCTTGCTATTGTTGGTATAAAGGATCCCTGTCGCTCTGGAGTCAAAGATGCTGTCAAATTATGCACCGAAGCTGGTGTTAAGGTACGCATGGTTACGGGAGATAATATTCAGACGGCAAAGGCAATAGCTTTGGAGTGTGGAATACTTTCTTCAAATGAAGATGTTGTTGAGCCAAATGTAATTGAAGGACAGGCATTCCGTGCATTATCTGAGAAAGATAGGGAAAAAGTTGCTAAAAATATAACAGTGATGGGGAGGTCTTCTCCTAATGACAAGCTTCTACTTGTGCAAGCACTACGTAAGGGTGGGGAAGTTGTTGCTGTCACAGGAGATGGCACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTTCAATGGGCATTCAGGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATTCTGGATGATAACTTTGCGTCAGTAGTGAAGGTTGTCCGATGGGGCCGTTCCGTGTATGCAAATATTCAGAAATTTATCCAGTTCCAGCTTACGGTTAATGTAGCAGCTCTTGTAATTAATGTTGTGGCTGCAGTTTCCTCTGGTGATGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGGGCTCTTGCATTGGCCACTGAACCGCCAACAGACCATCTTATGCACAGATCACCAGTTGGCCGAAGGGAGTCTCTTATAACGAATATCATGTGGAGGAACTTGCTCGTACAGGCTCTATATCAAATTACTGTTTTGCTTGTTTTAAACTTCCGCGGCAACCAAATTCTACAAATTCATGACTCTAGAGCTTATTCACATCAAGTGAAAAACACATTAATATTCAATGCGTTTGTCCTCTGCCAAATATTCAATGAGTTCAATGCCCGGAAACCAGATGAGATGAATGTCTTCCAGGGAGTGACTAAGAACCACCTCTTCATAGGAATTGTTGCAATCACCTTTATACTACAGATACTCATCATCGAGTTCCTTGGAAAGTTCACAAAAACTGTGAAGCTTGATTGGAAGCTGTGGCTTGTTTCTCTTGGTATAGGGGTGGTCAGCTGGCCTCTAGCTATAGCAGGAAAATTTATTCCTGTTTCGAAAACACCGTGGTCCCGGTACTTGTTGAAGCTTTGGAGGCGATGCTGGAGGCCTCGGACTACACAATAA 3297 0.4407 MTSASRGCNGSASNGLVTVAIEVHPDDPPHPLPSGNHDIDMEDDDDDDLVVNPDDPFDIGHTKNAPPETLRRWRQAALVLNASRRFRYTLDLNKEEEKQQKKNLIRAHAQVIRAALLFKLAGERELVITPAASPARVSVGDYVIGLEELVSMSKDHKVSALEHYGGVKGLSNLLKSSPEKGINGCDDDLLRRRTAFGTNTYPRKKGRSFFRFLWEAWQDLTLIILIIAAAVSLALGIKTEGVKEGWYDGGSIAFAVFLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEVVRGGRIVKISIFDIVVGDVVPLKIGDQVPADGVLITGHSLAVDESSMTGESKIVHKDHKAPFLMSGCKVADGVGTMLVTSVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVSVLVVLVGRYFSGNTRDLDGNVQFVSGKTSVSNAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGGKKRNLPDDISNLHPEVLSLINEGIAQNTSGNVFEPKGDGEVEISGSPTEKAILSWAVKLGMKFSLIKSNSTILHVYPFNSEKKRGGVVLKLADSSVHIHWKGAAEIVLSSCTQYLDSNGQLQSIDKEDFKEAIDDMAARSLRCVAIAYRSYEMDKVPSNEEDLAQWSLPEHELVLLAIVGIKDPCRSGVKDAVKLCTEAGVKVRMVTGDNIQTAKAIALECGILSSNEDVVEPNVIEGQAFRALSEKDREKVAKNITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRRESLITNIMWRNLLVQALYQITVLLVLNFRGNQILQIHDSRAYSHQVKNTLIFNAFVLCQIFNEFNARKPDEMNVFQGVTKNHLFIGIVAITFILQILIIEFLGKFTKTVKLDWKLWLVSLGIGVVSWPLAIAGKFIPVSKTPWSRYLLKLWRRCWRPRTTQ 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1909 1098 PRINTS P-type cation-transporting ATPase superfamily signature 836 848 - -
Dere11g1909 1098 PRINTS P-type cation-transporting ATPase superfamily signature 812 831 - -
Dere11g1909 1098 PRINTS P-type cation-transporting ATPase superfamily signature 705 716 - -
Dere11g1909 1098 PRINTS P-type cation-transporting ATPase superfamily signature 507 521 - -
Dere11g1909 1098 PRINTS P-type cation-transporting ATPase superfamily signature 727 737 - -
Dere11g1909 1098 PRINTS P-type cation-transporting ATPase superfamily signature 331 345 - -
Dere11g1909 1098 FunFam Calcium-transporting ATPase 262 383 - -
Dere11g1909 1098 Pfam E1-E2 ATPase 284 485 - -
Dere11g1909 1098 ProSitePatterns E1-E2 ATPases phosphorylation site. 509 515 IPR018303 -
Dere11g1909 1098 Gene3D - 504 857 IPR023214 -
Dere11g1909 1098 FunFam Calcium-transporting ATPase 215 272 - -
Dere11g1909 1098 PRINTS Sodium/potassium-transporting ATPase signature 626 644 - -
Dere11g1909 1098 PRINTS Sodium/potassium-transporting ATPase signature 500 521 - -
Dere11g1909 1098 PRINTS Sodium/potassium-transporting ATPase signature 250 270 - -
Dere11g1909 1098 CDD P-type_ATPase_Ca_PMCA-like 189 945 - -
Dere11g1909 1098 Gene3D - 517 712 IPR023299 GO:0000166
Dere11g1909 1098 FunFam Calcium-transporting ATPase 9 plasma membrane-type 361 531 - -
Dere11g1909 1098 SMART Cation_ATPase_N_a_2 161 237 IPR004014 -
Dere11g1909 1098 SUPERFAMILY Calcium ATPase, transmembrane domain M 162 1078 IPR023298 -
Dere11g1909 1098 PANTHER CATION TRANSPORTING ATPASE 124 1075 - -
Dere11g1909 1098 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 514 709 IPR023299 GO:0000166
Dere11g1909 1098 FunFam Calcium-transporting ATPase 65 121 - -
Dere11g1909 1098 FunFam Calcium-transporting ATPase 517 712 - -
Dere11g1909 1098 SUPERFAMILY Calcium ATPase, transduction domain A 285 380 IPR008250 -
Dere11g1909 1098 SFLD p-type atpase 489 864 IPR044492 -
Dere11g1909 1098 Pfam haloacid dehalogenase-like hydrolase 504 826 - -
Dere11g1909 1098 NCBIfam calcium-translocating P-type ATPase, PMCA-type 154 1075 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Dere11g1909 1098 MobiDBLite consensus disorder prediction 22 44 - -
Dere11g1909 1098 Pfam Cation transporter/ATPase, N-terminus 162 232 IPR004014 -
Dere11g1909 1098 FunFam Calcium-transporting ATPase 829 1077 - -
Dere11g1909 1098 SFLD C1.7: P-type atpase like 489 864 - -
Dere11g1909 1098 Gene3D - 188 383 - -
Dere11g1909 1098 Gene3D - 215 1063 - -
Dere11g1909 1098 Gene3D - 67 120 - -
Dere11g1909 1098 FunFam Calcium-transporting ATPase 705 857 - -
Dere11g1909 1098 Pfam Ca2+-ATPase N terminal autoinhibitory domain 54 97 IPR024750 GO:0005516
Dere11g1909 1098 SUPERFAMILY HAD-like 505 917 IPR036412 -
Dere11g1909 1098 NCBIfam HAD-IC family P-type ATPase 442 536 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g1909 1098 NCBIfam HAD-IC family P-type ATPase 778 892 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Dere11g1909 1098 Pfam Cation transporting ATPase, C-terminus 897 1072 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1909 Dere-ChrDere11 32930423 32944306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1909 11 1090 Primary Pumps ATPases AT3G21180 74.770 0.0 1618