LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere11g1903	ATGAATGCAATTAAAGGCCTACCTAGCAATAATAGCGGTTGTGGAAACATTGAGATTGCCATTTTGTTTTTGCCTGTGGCTGATATGGAAAGCACGGACAATCTTGAAGCCACCAGGCAGTACTTGAAATCTAGCCTAGAAAAATCAGGTGCTATTGCTTCTGCATTAGATGATTCAGGTTCAAGATTGGAGCTCCTAAACCACAAATGCCAATCCTTGGAAGCAGAACTTACGGCCATCTCTACACAAAAGTGCTCATTTCTTGACATAGGAGACCGTATTGATGGTGTCCTTTGTTCTGCTGCTGCAGTCCTCAAGGTGTTCGACGCCATTCATCCGCTGGAAAATTCTCTCCTGACTGACCCCAGTTCTGATCTTTGCACTTACATCTCAGACACGAAGAAGCTCGAGGAAGCCCTGAAGCTTCTCACAGATAACTGCCAGCTAGCAGTAGGGTGGCTGCAGGGCATTTTTGAGTTGTTGCAAGACAAAGCTATTCTCTCTGAGCTTTACCTGTTGAACGTGAAGGAATCTCTAAGAATATTACAAGACTTGCACGCTATGGAAGAAGGTGCTCGCCTTGACGGAGGCCTTCTCTGTGCAGCTTTTGACAAACTAGAGACTGAGTTCAAGCGGCTTCTGAAAGCAAACTCACTGCCTCTTGCTTTGTCTTCATTGGCATCACCCATAAGCCAGCAAGCCACCATACGAGCTTTGCCAGCTTCTGTCACAGGGAAATTACAGGCCATTATAGAGAGATTAAATGCTAATGGCAGGCTAGATAAGTGTAAATCCATATATGTTGAAGTTCGAGGAATGAACGCTCGAAGAAGCTTACAGGCTTTAGATTTGAGCTACCTCGAGATTCGAACGGCTATATTTGAGGATGTACATAGCATAGATAGTTACATAGAACAATGGGGTAGGCATTTGAAGGTGGTAGTAAAGGACCTGCTTGAGATGGAGTACAAATTCTCCTGTAAAATCTTTGAAAAAATTGGCGCAGAAGCCTGGATGGGATGTTTTGCCAAGATTGCCATTGAGTCAGGAATTCTTTCTTTTCTTATATTTGGAAGAAATGTTACTGAGAGTAAAAACGACCCCATCAAGTTGTTGAAGTTGCTGGACATATTCAGAGTCCTGAACGATCTAAGACTAAAGTTCAACCAGCTTTTCAGTGGGAAAGCTTGTGAGGAGATTAGAACTGTGACAAAGGATCTTATCAGTAGAGTCATCAATGGAGCATCTGAGATATTCTGGCAGCTTCCAGCCCAAGTGAAGTTGCAGAGGCCAAGTTCTCCTCCCCCAGATGGCGGTGTTCCTCGGCTCGTAAGCTTTGTCACTGATTACTGCAACCAGCTGCTTGGTGATACTTATAAGCCACTTCTGACGCAGGTTCTGGAAATTCATCATAGTTGGAGAAATGAAGTATATGAAGAAGGCATTATCTTCACCCAAGTTTTTACCGTAGTGAAGGAAATTGCTGTTAATTTGGATGCTTGGTCAAAGACCTATGAAGATATCACTTTGTCCTACCTTTTCATGATGAATAATCATTGCCATTTCTACAACTTGAGGGGCACTATGCTTGGGAACATGATGGGAGATTCTTGGTTAAGAGCACACGAGCAATATAGAGACTATTATGCTGCTCTTTATCTGAAAGATAGCTGGGGAAAGCTTCTACCAATTCTGAACAAAAAGGACGTACTTTCAGTTTCATCCTCTGGCCAAGATATGGCTAAGAGAATGAACGCTTTCAACGTGGCTTTCGATGAAAGGTATCAAAAGCAATCAAATTGGGTGATATCAGATGAGATGTTGAGAGAGAAAGTCAGGAAGCATATAGTGGAAGGGATAGTGCCAAACTATAGAAGCTACGTGAAGAACTACAGTTTAACAATGGAGAACGATGAAAAGGCTGCCAAGTATATCAAATACACAGAGCAGAGTTTGGAGAAGATGCTTTGGTCTCTGTTTCAGCCCAAGCTCAGCAAGTATGAGAGCATCAAACAAGCACACGTTATTAGTAAAATAAAACAACTGAGCAATCAGTTTCGCTTCACATTAGCAACTATGTAA	2082	0.4256	MNAIKGLPSNNSGCGNIEIAILFLPVADMESTDNLEATRQYLKSSLEKSGAIASALDDSGSRLELLNHKCQSLEAELTAISTQKCSFLDIGDRIDGVLCSAAAVLKVFDAIHPLENSLLTDPSSDLCTYISDTKKLEEALKLLTDNCQLAVGWLQGIFELLQDKAILSELYLLNVKESLRILQDLHAMEEGARLDGGLLCAAFDKLETEFKRLLKANSLPLALSSLASPISQQATIRALPASVTGKLQAIIERLNANGRLDKCKSIYVEVRGMNARRSLQALDLSYLEIRTAIFEDVHSIDSYIEQWGRHLKVVVKDLLEMEYKFSCKIFEKIGAEAWMGCFAKIAIESGILSFLIFGRNVTESKNDPIKLLKLLDIFRVLNDLRLKFNQLFSGKACEEIRTVTKDLISRVINGASEIFWQLPAQVKLQRPSSPPPDGGVPRLVSFVTDYCNQLLGDTYKPLLTQVLEIHHSWRNEVYEEGIIFTQVFTVVKEIAVNLDAWSKTYEDITLSYLFMMNNHCHFYNLRGTMLGNMMGDSWLRAHEQYRDYYAALYLKDSWGKLLPILNKKDVLSVSSSGQDMAKRMNAFNVAFDERYQKQSNWVISDEMLREKVRKHIVEGIVPNYRSYVKNYSLTMENDEKAAKYIKYTEQSLEKMLWSLFQPKLSKYESIKQAHVISKIKQLSNQFRFTLATM	693

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere11g1903	693	SUPERFAMILY	Cullin repeat-like	104	660	IPR016159	-
	Dere11g1903	693	Coils	Coil	56	83	-	-
	Dere11g1903	693	Pfam	Exo70 exocyst complex subunit	306	656	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Dere11g1903	693	Gene3D	Exocyst complex component Exo70	162	667	-	-
	Dere11g1903	693	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	101	660	IPR004140	GO:0000145\|GO:0006887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere11g1903	Dere-ChrDere11	32906028	32908109	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere11g1903	34	693	EXO70 exocyst subunit family	AT4G31540	51.111	0.0	671