Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1897 ATGGACATCAGCAAGAATAACATCAGCGGAGCAATTCCATCAAGTTTGGGAAACTGCATAAGTCTCTTCGGTTTAATTTTGTCCATGAACATCTTTATGGGGCTTATACCCTCTGAGCTAGGAAACCTTGTGAACCTTCAGGGTTTAAATCTTTCTCACAACAACTTGGAAGGTCCTTTGCCACATCAACTATCTTATTGTACCAAAATGGTAATATTTGATGTGGGATTCAATTTTCTAAATGGTTCACTCTCGTCAAGTTTGAGGAGCTGGACAGGTGAAGTTCCTGTAACTATCAATATTTTCTCGATGCTGCATAGTCTAGATATATCCCTGAACAATTTCACAGGAAGCATAGATTTTCTTGAAAGACTTCTTTCATTAAAAGAAGTCAATGTTTCATACAATTCCTTTGCCGGTCTTGTACCAGAATATATGAATTTTCCTCCATCGTCATTCTTGGGCAATCCTGGCCTATATGTCCATTTTCCTTCTTCAGACGGATCAAATTGCACTAAAACTAGCCTCTTGAAGCCATGTGACTCTGAATCAACTGACCACAAAGACAATAAACTTTTAATTTTATTTATAGCACTTGAATTCTTAGTGTTGGACCTTCACCAGCTGGGAATACGTCAACTTTACATCCGCCTTTATGGCCGAAGATCTGAGGAGGAGGTCATTACTGATAATGAAGAGCGAGAGCCTTGGCCTTTAAATGATGGAAACCTTAGAATTATTGACCTAGTGAAGGCTACAGAGAATCTAAATGATGGATATATAATTGGCAGAGGAGGGCAAGGAAATGTTTATAAAGCCGATCTAGACTTTGGAGCTTTTACTGTTAAGAAGGTTGAATTTGCAAGGAGCAATAGGAAGAGATTAAGCATGCTCAGAGAAATTGAAATCATTAAGAAGATTAGGCACCCAAATGTGGCAAAATTCCTAGGCTCTTGGATAGGAGAGGACTACGGTCTAATCATCAACAGAGACATCAAACCAAAAAATATACTCTTCGATTCTGATATGCAGCCTTACATTACTGATTTTGGCATTTCCATGGCTTTGAATCAATCCTCCACTATGATTCATATGAGGTCAACATATCATCTGGGCACACGTGGCTTTATGGCCCCAGAGATTGCATATATAACAATGCCGAGCTGTGAGATTGATGTATATAGTTATGGGGTAATTTTGCTTGACCTAATGACCAGAAAGAAAGTATTAGATTCCTCGTTTGAGGAGCAGGAAACCACTCTAGTCGGGTGGTTTAAATCTGTATGGAGGAAAACTAGAGAAGTTGAAGAGATTGTTGATCCAAGCCTTGCAAGGGAGCTTTCAGATTTAAATGTAGTGGTGCAAGTTACCAAAATGCTTTTGGTGGCTTTGATATGTACTGAGGCAGATCCTGGAAAGAGACTGAAAATGAGAGATATTATTGAATTCTTTGAAACACCCACAGACCCAGGTAAGAGTTGTGTCCGATTGACAATTACAAATGTTACTAACATCCATGTAGTTGAATGTTTTTTTCAACATGACAGAGCTTCATTTCATTTGGGGAGTTTCCTTGCAACTGCTGCAGCCTCTATATTTTTGCAGTTTTCTAGGAAGGAAGTCGTGATCCCTGCCAATAGAGTTTACTTCTCAATCATTCACAAGGTGATTAACGCTACTGCAAACCTACAGAATGCTTATATTATCAGCAGAGGAACTCATGGTGTTGTTTATAAAGCTCAAATATATGGCCGACATTATGCTGTGAAGAAGGTTACTTCTGCTGGGAATAAAGGCAAGACCTTAAGCATGGTTAAAGAAATTCAAATCCTTGAGAAGATTGGCCACCGAAATCTAGTCAGATTGCTAGACTTCTTGTTTAAAAAGGACCATGTTCTAATCTTGTACAGTTACATGCCAAATGGAAACCTTCATGATTGTTTGCTTGAAAAGAATCCACCGCCATATCCAGAGTGGAAAGTCAGGTATAAGATAGCTGCTGGAATTGCTCGCGGATTGGCTTATCTCCATTATGATTGTAATCCTGCCATAGTGCACTGTGCCATCAAACCAAAAAATATTCTTTTAGATTCTGATATGGAGCCTCAAATTGCTGATTTTGGTATTGCCAAGCTTTTGGATCAAGCTGCTTCTTCTTCAACAGCATCTTCATCTGTTCCAGGCACAGTAGGGTATATTACACCAGAGGATGCATATACAACAACAAATACTATGGAGTCTGATGTCTACAGTTATGGGGTAGTTTTGCTTCAGTTGATAACCAGAAAGAAGGCCTTCAATCCATCATTTGTGGAGGAAATTGATCTAATGGGTTGGGTCAGAACTCTATGGCGGGAAACGGGAGATTTTGATAAAATTGTTGATTCAAGCCTTGCAGGGGAGGTTTTGAATTCAAATGTACATGAGCAAGTTACCAAAGTGCTTTAG 2448 0.3917 MDISKNNISGAIPSSLGNCISLFGLILSMNIFMGLIPSELGNLVNLQGLNLSHNNLEGPLPHQLSYCTKMVIFDVGFNFLNGSLSSSLRSWTGEVPVTINIFSMLHSLDISLNNFTGSIDFLERLLSLKEVNVSYNSFAGLVPEYMNFPPSSFLGNPGLYVHFPSSDGSNCTKTSLLKPCDSESTDHKDNKLLILFIALEFLVLDLHQLGIRQLYIRLYGRRSEEEVITDNEEREPWPLNDGNLRIIDLVKATENLNDGYIIGRGGQGNVYKADLDFGAFTVKKVEFARSNRKRLSMLREIEIIKKIRHPNVAKFLGSWIGEDYGLIINRDIKPKNILFDSDMQPYITDFGISMALNQSSTMIHMRSTYHLGTRGFMAPEIAYITMPSCEIDVYSYGVILLDLMTRKKVLDSSFEEQETTLVGWFKSVWRKTREVEEIVDPSLARELSDLNVVVQVTKMLLVALICTEADPGKRLKMRDIIEFFETPTDPGKSCVRLTITNVTNIHVVECFFQHDRASFHLGSFLATAAASIFLQFSRKEVVIPANRVYFSIIHKVINATANLQNAYIISRGTHGVVYKAQIYGRHYAVKKVTSAGNKGKTLSMVKEIQILEKIGHRNLVRLLDFLFKKDHVLILYSYMPNGNLHDCLLEKNPPPYPEWKVRYKIAAGIARGLAYLHYDCNPAIVHCAIKPKNILLDSDMEPQIADFGIAKLLDQAASSSTASSSVPGTVGYITPEDAYTTTNTMESDVYSYGVVLLQLITRKKAFNPSFVEEIDLMGWVRTLWRETGDFDKIVDSSLAGEVLNSNVHEQVTKVL 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1897 815 SMART serkin_6 256 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1897 815 SMART serkin_6 563 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1897 815 SUPERFAMILY Protein kinase-like (PK-like) 548 777 IPR011009 -
Dere11g1897 815 Gene3D Ribonuclease Inhibitor 1 187 IPR032675 -
Dere11g1897 815 ProSiteProfiles Protein kinase domain profile. 563 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1897 815 Gene3D Transferase(Phosphotransferase) domain 1 326 489 - -
Dere11g1897 815 Gene3D Transferase(Phosphotransferase) domain 1 639 815 - -
Dere11g1897 815 SUPERFAMILY Protein kinase-like (PK-like) 244 483 IPR011009 -
Dere11g1897 815 ProSiteProfiles Protein kinase domain profile. 148 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1897 815 SUPERFAMILY L domain-like 2 146 - -
Dere11g1897 815 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 286 489 - -
Dere11g1897 815 Pfam Protein kinase domain 569 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1897 815 Pfam Protein kinase domain 327 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1897 815 Gene3D Phosphorylase Kinase; domain 1 222 325 - -
Dere11g1897 815 Gene3D Phosphorylase Kinase; domain 1 538 638 - -
Dere11g1897 815 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 554 815 - -
Dere11g1897 815 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 639 815 - -
Dere11g1897 815 FunFam Leucine-rich repeat receptor protein kinase EMS1 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1897 Dere-ChrDere11 32863305 32867424 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1897 552 814 Receptor kinase-like Gene Family AT1G73080 47.778 3.12e-72 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere11g1897 Pkinase 5.3e-40 CL0016