Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1895 ATGAGGCATCTCTTTGTGCTTCTTCTTCTATGCTTTTCTTCCTTCCTATGTTCAGTCTCTGGGTTGAGCTCTGATGGGGTGACCCTAATGTCACTCTTGAGGCGTTGGACTTTTGTGCCTCATCCCGTAAACTCCAGCTGGAATCCCTCTGATTCCACTCCTTGCTCATGGGTAGGAATCCAATGCGACCATGCCCACAATGTAATCTCCCTTAACCTCACTGACTGTGGGATTGTTGGTCATTTAGGACCTGAGATTGGACTTTTGAGTCACTTGCAGACCTTTGTATTGTTGACTAACAGGTTCTCTGGAAAAATGCCTCATGAGTTGGGAAATTGTAGTCTGCTAGAGTACCTAGACCTTTCTGAAAACAACTTTAGTGGACAAATACCTGAGAGCTTCAACAACTTGAAAAATCTGAAGTATATCAGCCTTTCTACTAATCTACTCACTGGTCAAATCCCAGAATTCTTCACTCAAATTCCTCACTTGCAATTTGTTGACATGTCTTATAACACTCTCAGTGGTCCCATCCCTTCAAGTATAGGAAACATGAGTGAGCTTTTGGTGCTGTATCTACAAAGTAATCAGTTGTCTGGGGAAATTCCTTCTTCAATTGGGAATTGCAGTAAGCTGCAGGAATTGTTTTTGGATAGGAATCCGTTTCAGGGATCCCTTCCTGAGACTCTTAACAATCTCCATGATATTACATATCTGGACTTTGCTGATAATGGTCTTAGGGGTACCATTCCATTGGGTTCTGGTAGTTGTGAAAATTTATTTTTCTTGGATCTCTCACACAACGTATTTAGTGGAGGCATTCCTTCAGGCTTGGGGAATTGTAGTGATTTAACGCAATTTGCTGCTGTTAACAGTAGCTTAACTGGCAGTATCCCATCCTCCATTGGTCTACTTCGCAAGCTTTCTCATTTACGCCTTCCTGTGAACAATTTGTCTGGAAAAATACCTCCAGAAATTGGCAATTGTAAGTCTTTGAAAGAGTTACATTTGTATTCCAATCAACTTGAGGGAGAAATCCCCAGTGAGCTGGGAGAGTTGAGTGAATTACTGGATCTTGAATTGTTTTCCAACCGTTTGACTGGTGAAATTCCTCTCAGTGTCTGGAAGATTCAAAGTCTTGAGCATATCCTTGTGTACAATAATAACCTATCTGGAGAACTGCCTCTGGAAATGACAGAGCTCAAGCAACTGAAGAATATCTCATTGTTTGACAACCACTTCTCTGGAGTAATACCTCAAACTTTGGGAATTAATAGCAGTTTAGTACAGTTAGACTTTACAAATAATAAGTTCACTGGTAACATCCCACCAAATCTTTGTTCTGGAAAGCAATTAAATGTGCTGAATTTGGGCCTAAATCAGCTTCAAGGTAGCATACCTCCTGATGTAGGAAGGTGTACGACTCTTAGAAGGTTGATTCTCGCAAAAAATAATTTTACAGGGCCATTTCCTGATTTTGACAGTAATCCCAATCTCACGTTCATGAACATCAGCAGAAACAATATTAATGGCACTATCTCACCAAGTTTGGGAAACTGCTCAAGTCTCACTGTTTTAATTTTATCATACAACAACTTTATGGGGCATATACCGTCAGAGCTAGGAAACCTTGTGAACCTGAAGACTTTGACTCTTGCTCACAACAACTTAGATGGTCCTTTGCCACCTCAGTTGTCAAAATGTACTAAAATGGACAGTTTTGATGTGGGATTCAATTTCCTGAATGGTTCGTTTCCATCAAGTTTGAGGAACTGGACTAGAATAACCACATTAATTCTAAGAGAGAATCATTTCACGGGGGGCATTCCAACTCTCTTGTCAGAATTTTCCAAGCTTCTTGAGCTACAACTTGGTGGAAATTTGTTTGGAGGTGAGATTCCTAGATCACTTGGAGCATTGCAGAATCTCTTCTATGGGTTAAATCTTAGTGCTAATGGGCTGATTGGTGAAATTCCTCTAGAGATTGGGAAATTGAAAAATCTGCAAAGTCTGGATCTTTCTCGAAACAATTTGACTGGAAGCATAGGAGTTCTTGCTGAACTTCCTTTATTAGTTGAAATCAATGTTTCATACAATTCCTTTGATGGTCCTGTACCGAAGACGCTGATGAAGTTTCTTAATTCTTCTTCATCGCCGTTTTTGGGAAATCCTGGCCTATGTGTTAGTTGTTCATCATCAAATGGCTTGATTTGCAATGAAAGCAGCCATCTAAAGCCATGTGATGATAAATTGACAAATCAGAAAGGCCTCAGTAGAGTAAAAATTGCAATGATAGCACTTGGATCCTCAATATTTCTTGTTTGTCTGCTGCTGGGAGTAGTCTATATGTGTGTCCGTGGCAGAAAATCTGAGCAGGAAGTCCAGATCTCTGCCAAAGAAGGTTCTTCCTCACTTTTTAACAAAGTGATGGAGGCTACAGAAAACCTAAGTGACCGGTATATTATTGGTAGAGGAGCTCATGGAGTTGTTTATAAAGCCTCAGTAGATCCAGCCCAAGTGTATGCTGTAAAGAAGCTTGCATTTGCTGGGAACAAAGGCAAGAGCTTAAGCATGGTTAGAGAAATTCAAACCCTTGGAAAGATTAGGCACAGAAATCTAGTCAAATTGGAAGACTTTTGGTTGAGAAAAGACTTTGGTCTGATCTTGTATACGTACATGCCAAATGGAAGCCTCCATGACGTCTTGCATGAAAAGAATCCACCGCCATCCTTAGAGTGGAATGTCCGGTATAAGATAGCTATTGGAATTGCTCATGGATTGGCATATCTCCATTATGACTGTGATCCTCCCATAGTGCACCGCGACATCAAACCAAAAAATATACTCCTAGATTCTGATATGGAGCCTCACATTGCTGATTTTGGTATTGCCAAGCTTTTGGATCAGTCGTCTGCTCCAACACCATCTATATCTGTTCCTGGCACAGCAGGGTATATTGCACCAGAGAATGCATATACAACAGCAAATAATAGGGAATCTGATGTATACAGTTATGGGGTAGTTTTGCTTGAGTTGATGAGCAGAAAGATGGCAGTAGATCCATCATTTATGGAGGGGATTGATATAGTGGGTTGGGTCAGACCTCTGTGGGGGGACACACGAGATATTGATAAAATTGTTGATTCAAGCCTTGCAGATGAATTTCTGGATTCAAATGTACTAGAACAAGTTACCAAAGTGCTTTTCGTGGCTCTGAGATGCACTGAGAAGGAGCCACGCCTGAGACCCACTATGAGAGCTGTTGTCAAGCAATTAGAAGATGCTAATCCCAGGACAAGAAGTAAAAAGCTTCCAAGTTCCAACTCCTTATTGCATAGTCGAGCCACACATTGTAAGATACAGAATTACATTGTTTCTTCTCTCATGCAATGA 3393 0.4079 MRHLFVLLLLCFSSFLCSVSGLSSDGVTLMSLLRRWTFVPHPVNSSWNPSDSTPCSWVGIQCDHAHNVISLNLTDCGIVGHLGPEIGLLSHLQTFVLLTNRFSGKMPHELGNCSLLEYLDLSENNFSGQIPESFNNLKNLKYISLSTNLLTGQIPEFFTQIPHLQFVDMSYNTLSGPIPSSIGNMSELLVLYLQSNQLSGEIPSSIGNCSKLQELFLDRNPFQGSLPETLNNLHDITYLDFADNGLRGTIPLGSGSCENLFFLDLSHNVFSGGIPSGLGNCSDLTQFAAVNSSLTGSIPSSIGLLRKLSHLRLPVNNLSGKIPPEIGNCKSLKELHLYSNQLEGEIPSELGELSELLDLELFSNRLTGEIPLSVWKIQSLEHILVYNNNLSGELPLEMTELKQLKNISLFDNHFSGVIPQTLGINSSLVQLDFTNNKFTGNIPPNLCSGKQLNVLNLGLNQLQGSIPPDVGRCTTLRRLILAKNNFTGPFPDFDSNPNLTFMNISRNNINGTISPSLGNCSSLTVLILSYNNFMGHIPSELGNLVNLKTLTLAHNNLDGPLPPQLSKCTKMDSFDVGFNFLNGSFPSSLRNWTRITTLILRENHFTGGIPTLLSEFSKLLELQLGGNLFGGEIPRSLGALQNLFYGLNLSANGLIGEIPLEIGKLKNLQSLDLSRNNLTGSIGVLAELPLLVEINVSYNSFDGPVPKTLMKFLNSSSSPFLGNPGLCVSCSSSNGLICNESSHLKPCDDKLTNQKGLSRVKIAMIALGSSIFLVCLLLGVVYMCVRGRKSEQEVQISAKEGSSSLFNKVMEATENLSDRYIIGRGAHGVVYKASVDPAQVYAVKKLAFAGNKGKSLSMVREIQTLGKIRHRNLVKLEDFWLRKDFGLILYTYMPNGSLHDVLHEKNPPPSLEWNVRYKIAIGIAHGLAYLHYDCDPPIVHRDIKPKNILLDSDMEPHIADFGIAKLLDQSSAPTPSISVPGTAGYIAPENAYTTANNRESDVYSYGVVLLELMSRKMAVDPSFMEGIDIVGWVRPLWGDTRDIDKIVDSSLADEFLDSNVLEQVTKVLFVALRCTEKEPRLRPTMRAVVKQLEDANPRTRSKKLPSSNSLLHSRATHCKIQNYIVSSLMQ 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1895 1130 ProSiteProfiles Protein kinase domain profile. 816 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1895 1130 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 460 1086 - -
Dere11g1895 1130 Gene3D Ribonuclease Inhibitor 428 734 IPR032675 -
Dere11g1895 1130 SMART LRR_typ_2 305 329 IPR003591 -
Dere11g1895 1130 SMART LRR_typ_2 544 568 IPR003591 -
Dere11g1895 1130 SMART LRR_typ_2 330 353 IPR003591 -
Dere11g1895 1130 SMART LRR_typ_2 185 209 IPR003591 -
Dere11g1895 1130 SMART LRR_typ_2 616 640 IPR003591 -
Dere11g1895 1130 SMART LRR_typ_2 137 160 IPR003591 -
Dere11g1895 1130 SMART LRR_typ_2 665 687 IPR003591 -
Dere11g1895 1130 Gene3D Phosphorylase Kinase; domain 1 787 892 - -
Dere11g1895 1130 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 21 179 - -
Dere11g1895 1130 Gene3D Ribonuclease Inhibitor 24 178 IPR032675 -
Dere11g1895 1130 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 782 892 - -
Dere11g1895 1130 Gene3D Ribonuclease Inhibitor 354 427 IPR032675 -
Dere11g1895 1130 Pfam Protein kinase domain 821 1089 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1895 1130 SUPERFAMILY RNI-like 417 715 - -
Dere11g1895 1130 ProSitePatterns Serine/Threonine protein kinases active-site signature. 938 950 IPR008271 GO:0004672|GO:0006468
Dere11g1895 1130 SUPERFAMILY Protein kinase-like (PK-like) 800 1092 IPR011009 -
Dere11g1895 1130 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 180 274 - -
Dere11g1895 1130 Gene3D Ribonuclease Inhibitor 286 353 IPR032675 -
Dere11g1895 1130 FunFam Serine/threonine-protein kinase-like protein CCR4 893 1110 - -
Dere11g1895 1130 Gene3D Transferase(Phosphotransferase) domain 1 893 1115 - -
Dere11g1895 1130 FunFam Predicted protein 297 396 - -
Dere11g1895 1130 Pfam Leucine rich repeat 116 174 IPR001611 GO:0005515
Dere11g1895 1130 ProSitePatterns Protein kinases ATP-binding region signature. 822 845 IPR017441 GO:0005524
Dere11g1895 1130 SMART serkin_6 816 1099 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1895 1130 PRINTS Leucine-rich repeat signature 116 129 - -
Dere11g1895 1130 PRINTS Leucine-rich repeat signature 665 678 - -
Dere11g1895 1130 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Dere11g1895 1130 ProSiteProfiles Leucine-rich repeat profile. 667 689 IPR001611 GO:0005515
Dere11g1895 1130 Gene3D Ribonuclease Inhibitor 179 285 IPR032675 -
Dere11g1895 1130 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 409 737 - -
Dere11g1895 1130 SUPERFAMILY RNI-like 70 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1895 Dere-ChrDere11 32855461 32858939 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1895 13 1101 Receptor kinase-like Gene Family AT1G73080 53.309 0.0 1093
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere11g1895 Pkinase 1.9e-42 CL0016