Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1887 ATGGGGTGGTATATGAAGATGGGTTCTGTAGAGGATAACATAGACCTTGAGTCTGAAGAGGAGATTCCTTTAAGACTGTCACCTTCGGCGAAGAAAGTCCATAATTTTGATTTTGAGACAACGCGTGTACTTTCTCCTGTGAATTTTGCCAGCTTATCCATCTTTAAACAGTTACAGATACGACCATTCAGGAGCCTATATATTGTCTTAATTAAAGCGAAGATCAACTTGTTGCTACCATTTGGTCCTTTGGCCATATTGCTACATTATCTGACGGGAAAGCATGGATGGGTGTTCTTTTTCAGCTTGTTGGGTATTACTCCTTTGGCAGAACGTTTGGGTTATGCTACTGAGCAGCTTGCATTTTACACAGGACCAACAGTTGGGGGTCTGCTGAATGCCACATTTGGCAATGCTACTGAAATGATTATATCAATTTATGCTTTGAAAAATGGGATGATTAGAGTTGTTCAGCAATCTTTATTGGGCTCAATTTTGTCAAATATGCTTCTAGTTCTTGGATGTGCCTTCTTTACTGGTGGAATTGTCCACTACAAAAAGGTTCAGGTTTTCAACAAGGCATCTGTTGTTGTAAATTCTGGGTTGCTTTTGATGGCTGTTATGGGAATATTGTTTCCTGCTGTGCTTCACTTTACTCACTCAGAGGTTCATTCTGGGAAATCCGAGTTATCTCTATCCAGATTTAGCAGCTGTATAATGCTAGTGGCATATGCAAGCTACCTTTTCTTTCAATTAAGAAGTCAGCATAATCTTTATTGTCCTATTGAAGAGGAAGCTGATGGTGTTGAAAATTCTGATGAGGAAGAAATTGAATTAACTCGATGGGAAGCAATAGGCTGGCTTGCTATTTTGACAATATGGATATCTGTACTGTCTGGATACCTTGTGGATGCCATACAGGGGGCGTCTGAGTCATTGAATATGCCTGTGGCTTTTATTAGTGTCATATTGCTTCCAATTGTAGGCAATGCTGCTGAACATGCAAGTGCTATCATGTTTGCCATGAAGGATAAGCTTGATATCACACTCGGAGTTGCTATTGGATCTTCTACACAGATATCTATGTTTGTGATCCCTTTCTGTGTGGTTGTTGGGTGGTGCATGGGGAAAGAAATGGACCTGAATTTTCAACTCTTTGAGACTGCTACACTTTTTATCACTGTGCTAGTAGTAGCATTTATGTTGCAGGAAGGGACCTCAAATTATTTTAAAGGCTTGATGCTTATTCTTTGCTACCTCATCGTTGCAGCCAGCTTTTTCGTACATGTTGACCCTACAGATGGTGAGTTACAGAAGTATACTCATTATTGATCTGTTCAGGTGATGACTAAGTATACTGTGGCTATGGTAGCCATCCGTGTTGCCTTGCTTCTGCACTACCTAATGCTGGAAAAAGTGGAAAGCAGTGTGGTTGAAGTTGAAAGGTCCCTTTCAGAAAATTCTCATGTTGGCATTCAACATGGCATGGGATACCCCAATGGATCCTGA 1509 0.4062 MGWYMKMGSVEDNIDLESEEEIPLRLSPSAKKVHNFDFETTRVLSPVNFASLSIFKQLQIRPFRSLYIVLIKAKINLLLPFGPLAILLHYLTGKHGWVFFFSLLGITPLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHYKKVQVFNKASVVVNSGLLLMAVMGILFPAVLHFTHSEVHSGKSELSLSRFSSCIMLVAYASYLFFQLRSQHNLYCPIEEEADGVENSDEEEIELTRWEAIGWLAILTIWISVLSGYLVDAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPTDGELQKYTHYXSVQVMTKYTVAMVAIRVALLLHYLMLEKVESSVVEVERSLSENSHVGIQHGMGYPNGS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1887 502 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 60 432 IPR004713 GO:0006812|GO:0008324|GO:0016020
Dere11g1887 502 Pfam Sodium/calcium exchanger protein 285 424 IPR004837 GO:0016020|GO:0055085
Dere11g1887 502 Pfam Sodium/calcium exchanger protein 97 252 IPR004837 GO:0016020|GO:0055085
Dere11g1887 502 Gene3D - 126 428 IPR044880 -
Dere11g1887 502 FunFam Vacuolar cation/proton exchanger 272 428 - -
Dere11g1887 502 NCBIfam calcium/proton exchanger 78 427 IPR004798 GO:0006816|GO:0015369
Dere11g1887 502 FunFam Vacuolar cation/proton exchanger 126 265 - -
Dere11g1887 502 NCBIfam calcium/proton exchanger 69 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1887 Dere-ChrDere11 32740658 32747915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1887 64 435 Antiporters AT3G13320 76.267 0.0 587