Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1884 ATGGAGTTAACCACTGTGGTCGTGCTGGTGTTTCTTTCAGTTTCAGCACTGTGTTTCCATGGCCAAGGAGTCGTCGTTGTGTCGAAGGAAGGAGACGGAGATTACGCGAGTGTGGGCGAAGCCATAGCCAAAGCTCCCAAAATGAGCACAGAACCATACACCATCTACGTCCGAGCTGGGACTTATCATGAGTACGTCGTCGTTCCACCTGAGAAAACCAACATCAAGCTCGTCGGCGAGGGTCCTCATCAAACCCGAATAGTTGGCAACCAAAATGGCATCACACTAGATATCTATGGAGAAGGGTTCATGGCCCAAAACATGGCGTTGGTGAACTCAGCAAGGCTGAAAGCAAGCGCAGCAGTGGCTGTTCGCAACGAAGCAAACAACACCATCTTCTTCCAGTGCTCCATCGAAGGCTTCCAAGACACTCTCTGGGCTGTCTCCGGCCGCCAGTTTTACAAAAACTGCCAAATCTCCGGCACCGTCGACTTCATCTACGGCGCCGCGGCCGCCCTCTTCCAAGACTGCACCCTCCTCGCCCGCTTCCGCCCCTACGTCACCTTCACCGCCCAGTCACGTGACGACCCTAACCAACACTCCGCCTTCACCTTCCAACGCTGCTACTTCACCATGGCTCCCGAGGACTATGACCGAAAGTCGGAGGTACGTGCCACCTTGGGTAGGCCATGGAGGCCCTATTCCACCGTCGCCGTCGTCGAGTCTTATATAGACTCCATGGTGGACCCCGCCGGTTGGGAAGAGATGCCAGGTCAGCCTACCGATAAGGTGACGTATGTGGAGTTCAATAATTATGGGCCTGGATCCGGGACTGATAGGAGAGTGGACTGGCCCGGTGTTAGAGTCCTCGACGACCCAAATGAAGCCCAGCCTTTTACTGCTTCGGTTTTGTTGGACGCTGATTCCTGGATCCCCCTCAAGGGTGTTCCCTATGACAACGGATTTTAG 969 0.5459 MELTTVVVLVFLSVSALCFHGQGVVVVSKEGDGDYASVGEAIAKAPKMSTEPYTIYVRAGTYHEYVVVPPEKTNIKLVGEGPHQTRIVGNQNGITLDIYGEGFMAQNMALVNSARLKASAAVAVRNEANNTIFFQCSIEGFQDTLWAVSGRQFYKNCQISGTVDFIYGAAAALFQDCTLLARFRPYVTFTAQSRDDPNQHSAFTFQRCYFTMAPEDYDRKSEVRATLGRPWRPYSTVAVVESYIDSMVDPAGWEEMPGQPTDKVTYVEFNNYGPGSGTDRRVDWPGVRVLDDPNEAQPFTASVLLDADSWIPLKGVPYDNGF 322
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1884 322 Gene3D - 23 322 IPR012334 -
Dere11g1884 322 SUPERFAMILY Pectin lyase-like 23 319 IPR011050 -
Dere11g1884 322 Pfam Pectinesterase 25 307 IPR000070 GO:0030599|GO:0042545
Dere11g1884 322 PANTHER PECTINESTERASE 25 312 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere11g1884 Dere-ChrDere11 32718685 32721888 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1884 25 322 Carbohydrate Esterase AT1G11590 41.346 8.25e-76 240