Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1881 ATGTCCAGACTTTTAAACTTGGGATTGTACCAATCACTTTTGGGCCAACACTATGTCCCTTGGCATCCTGGGGTTGAATGTGAAGAATTCCAGAGACAGCATGAGAATGAGAGAGAAAGGGAAGATCTGCTTGTGAGAGAGCTTGCTAATGAGAAGAAATGGAGAAGGTGTCCCCAGTGTCAGTTTTATGTGGAGAAGATAGATGGGTGCTTACATATCACTTGCAGGATTCAGGGATTAATGGGGTTTGGGGTTGCAGGTGCCAATATGAATTTTGCTATGAGTGTGGAGAGCAATGGAGTTCTACTCATGGTGGCTGGCAAAGAAACTAGATGA 336 0.4435 MSRLLNLGLYQSLLGQHYVPWHPGVECEEFQRQHENEREREDLLVRELANEKKWRRCPQCQFYVEKIDGCLHITCRIQGLMGFGVAGANMNFAMSVESNGVLLMVAGKETR 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1881 111 Coils Coil 27 51 - -
Dere11g1881 111 SUPERFAMILY RING/U-box 38 75 - -
Dere11g1881 111 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 19 77 IPR031127 GO:0004842|GO:0016567
Dere11g1881 111 Gene3D - 24 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1881 Dere-ChrDere11 32713261 32713819 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1881 18 76 C3H Transcription Factor Family AT2G19610 32.203 3.14e-08 48.1