Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1866 ATGAGGGCCAGCGTCGCGACTGCCTATGGGGAAGTCAGTGGTTTTGTGGCACATCTAATTCTGCAGAGTAGCATCCATGGTAGCCAGTCACTTTCGTTCACCAAATCTCGTTTGTCTCCACTGCATGATCCTCCCTCAATCTCCAGAATTGTTGACCCACTTAGGGTCAAGGGCTCTTCTGACGTGGCGCCCCATTACTGGTGCGAGTGGGACCCACATCCGGCGCGAGGGATGATTATAAACGTGAAGGTGTCGACGCTGGTGCGGCCGGCCGAGGAAACGCCGCGGAGGGCGCTGTGGAATTCTAACGTGGACTTGGTGGTGCCGAATTTCCACACGCCTAGCGTGTACTTCTACAGGCCGACGGGCGCGTCGAATTTCTTCGACGCCGAGGTTCTAAAGGAGGCTCTGAGCAAGGCTCTGGTGCCATTCTACCCAATGGCGGGGCGGCTTCGCCGGGACGACGACGGCCGTGTCGAGATCGACTGCAACGGCGAAGGCGTGCTCTTCGTCGAGGCCGACACCGGCGGAGTCATTGATGATTTCGGCGACTTCGCGCCCACGCTTGAGCTCCGGCAGCTCATCCCAGCCGTTGATTATTCTCGTGGAATCGAAACGTATCCCCTGTTAGTGTTGCAGGTAACATATTTCAAATGTGGAGGAGTATCCCTAGGGGTTGGTATGCAACACCATGTAGCAGATGGATATTCTGGTCTTCACTTCATCAATGTATGGTCAGATATGGCTCGTGGCCTTGATCTTACCATCCCACCCTTCATCGACCGGACCCCTCTTCGAGCTCGGGATCCTCCTCAACCTGTGTTTGATCACATTGAATACAAGCCCCCTCCAGCCATGACCACTCCTTTGTTGCAACCTGCAAAGCCAGGTACAGCCACGGCAGCAGAAGCTGCAGTATCAATTTTCAAATTGACTCGTGCCCAGTTAAGCCTACTGAAATCTAAGTCCAGAGAAAATGGCAACACAATCAACTATAGCTCCTATGAGATGTTGGCTGGTCATGTATGGAAAAATGTGTGCAAGGCACGAGCCCTACCTGATGATCAAGAGACCAAACTGTACATTGCAACCGATGGAAGGTCTAGATTGCAGCCACCTCTCCCACCAGGTTACTTTGGCAATGTGATCTTCACGACCACACCAATGGCTAAGGCTGGTGATCTCATGTCAAAACCAACATGGTATGCTGCAAGCAGGATTCACAATGGACTGGCACGAATGGACAACGAGTATTTGAGGTCGGCATTGGACTACCTAGAACTTCAATCTGATCTAAAAGCACTTGTTCGTGGAGCGCACACTTTCAGGTGTCCAAATCTGGGTATCACAAGCTGGGTTAGGCTGCCTATACATGATGCTGATTTTGGGTGGGGGAGACCTATTTTCATGGGACCTGGTGGGATCGCATATGAAGGACTGTCTTTTATAATACCAAGCTCAACAAATGATGGTAGCTTGTCTGTGGCAATTGGTCTGCAGCCTGACCATATGAAAGTGTTTCAGGAATTGCTGTATGACATTTAA 1545 0.5139 MRASVATAYGEVSGFVAHLILQSSIHGSQSLSFTKSRLSPLHDPPSISRIVDPLRVKGSSDVAPHYWCEWDPHPARGMIINVKVSTLVRPAEETPRRALWNSNVDLVVPNFHTPSVYFYRPTGASNFFDAEVLKEALSKALVPFYPMAGRLRRDDDGRVEIDCNGEGVLFVEADTGGVIDDFGDFAPTLELRQLIPAVDYSRGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGYSGLHFINVWSDMARGLDLTIPPFIDRTPLRARDPPQPVFDHIEYKPPPAMTTPLLQPAKPGTATAAEAAVSIFKLTRAQLSLLKSKSRENGNTINYSSYEMLAGHVWKNVCKARALPDDQETKLYIATDGRSRLQPPLPPGYFGNVIFTTTPMAKAGDLMSKPTWYAASRIHNGLARMDNEYLRSALDYLELQSDLKALVRGAHTFRCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSTNDGSLSVAIGLQPDHMKVFQELLYDI 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1866 514 Gene3D - 294 514 IPR023213 -
Dere11g1866 514 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 86 511 - -
Dere11g1866 514 FunFam Spermidine hydroxycinnamoyl transferase 78 280 - -
Dere11g1866 514 Pfam Transferase family 80 510 - -
Dere11g1866 514 Gene3D - 75 282 IPR023213 -
Dere11g1866 514 FunFam Tryptamine hydroxycinnamoyl transferase 292 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1866 Dere-ChrDere11 32593521 32602454 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1866 78 514 Monolignol Biosynthesis Gene Families AT5G48930 77.574 0.0 712