Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1865 ATGGGGATATACCTCAGCACCCCGAAAACAGAGAAGGCTTCTGAAGATGGTGAGAATGGCACGCTTCGCTACGGTTTGTCTTCCATGCAGGGATGGCGCGCTGCAATGGAAGATGCTCATGCGGCCCATCTAGATTTGGACGAGTCAACATCTTTCTTTGGTGTTTATGATGGCCATGGAGGTAAAGCTGTTGCTAAATTCTGTGCCAAATATCTACACCAACAGGTGCTTAAGCATGAAGCGTATGTTGCTGGAGATTTAGGCACATCTTTACAGAAAACTTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGGTGGAGAGAATTAGCAGTCCTGGGAGATAATATGGAAAAGTTATCTGGTATGCTGGAGGGCTTTATATGGTCGCCCAGGACTGAAGCCAATAACCATTCTGATGATTGGATTCTTGAGGAGGGGCCGCATTCTGATTTTACTGGACCAAACTCTGGATGCACAGCTTGTGTGGCAGTCATTCGAGGCAAACAACTAGTGGTTGCAAATGCTGGTGATTCTCGCTGTGTAATATCAAGGAAGGGCCAGGCACATAATTTGTCTAAAGACCACAAGCCAGACCTTGAAGTCGAAAGAGACAGGATTTTAAAAGCTGGTGGTTTCATTCAAGTTGGGCGGGTTAATGGAAGTCTAAATTTGGCTAGAGCAATTGGAGACATGGAATTCAAGCAAAACAAGTTTTTGCCTGCTGAAAAGCAGATTGTGACTGCTGATCCAGACATAACTTCTGTTGAGCTTTGCGATGATGATGAGTTTCTTGTAATAGCTTGTGATGGTATATGGGATTGCATGTCAAGCCAACAGCTTGTGGACTTTATACATGGACAGATAAAGACGGAGAATAAACTTTCTGTGGTTTGCGAGAAAGTATTTGATAGGTGCTTGGCACCAACAGCCGGTGGCGAGGGATGTGACAACATGACCATGATCCTGATTCAGTTCAAATGGCCTTTAAGTCCAGATGCTGCTATTATGGACAAGCCTCTGTCATGTGCTCAACCATCGAAGGTTGATAAAAGTTTAGCTGAATCATCCAAGGCTGATAATAGTGTAGATCAACGATCCAATGCTGATAAAAGTATAGATCAACCATCCAAAGCTGATATAAATGTATCTCAACCAACCGTGGCTGATGAAAGTTTAGATCAACCATCCAACGCTGATAAAAGTTCAGACCAACCAGTCTAG 1227 0.4385 MGIYLSTPKTEKASEDGENGTLRYGLSSMQGWRAAMEDAHAAHLDLDESTSFFGVYDGHGGKAVAKFCAKYLHQQVLKHEAYVAGDLGTSLQKTFLRMDEMMRGQRGWRELAVLGDNMEKLSGMLEGFIWSPRTEANNHSDDWILEEGPHSDFTGPNSGCTACVAVIRGKQLVVANAGDSRCVISRKGQAHNLSKDHKPDLEVERDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTADPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHGQIKTENKLSVVCEKVFDRCLAPTAGGEGCDNMTMILIQFKWPLSPDAAIMDKPLSCAQPSKVDKSLAESSKADNSVDQRSNADKSIDQPSKADINVSQPTVADESLDQPSNADKSSDQPV 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1865 408 CDD PP2Cc 23 327 IPR001932 -
Dere11g1865 408 Gene3D - 1 328 IPR036457 -
Dere11g1865 408 MobiDBLite consensus disorder prediction 351 408 - -
Dere11g1865 408 SMART PP2C_4 13 325 IPR001932 -
Dere11g1865 408 MobiDBLite consensus disorder prediction 375 408 - -
Dere11g1865 408 SUPERFAMILY PP2C-like 3 329 IPR036457 -
Dere11g1865 408 PANTHER PROTEIN PHOSPHATASE 2C 18 326 IPR015655 GO:0004722|GO:0006470
Dere11g1865 408 ProSiteProfiles PPM-type phosphatase domain profile. 23 327 IPR001932 -
Dere11g1865 408 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Dere11g1865 408 Pfam Protein phosphatase 2C 139 312 IPR001932 -
Dere11g1865 408 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Dere11g1865 408 FunFam probable protein phosphatase 2C 60 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1865 Dere-ChrDere11 32580311 32586996 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1865 1 330 PP2C-type Phosphatase Gene Family AT2G25070 78.614 0.0 562