Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1857 ATGACTCTCATCCATTTTATATGTGCCGGTGGGGGTTCAAGCGGCAAAAGTAGTCAAAAGAGAGTAAGCAGTGGAGTGCAGCAAAGGCAGGAACAAGAGCAGGTCCCGAGTATGAAGGCGAGGATGATGTGGTTGGCTCTATTCGCCGCCTTTGCTTCCCTCTCTGCTGTCACCTCCACCGATCACATAGTGGGAGCCAACCGTGGCTGGAACCCTGGCATTAACTACACTCTCTGGGCCAACAACCAGACTTTCTATGTCGGCGACCTCATCTCATTCAGGTACCAGAAAAACCAGTATAATGTGTTTGAGGTGAACCAAACGGGTTATGACAACTGCACTACTGAAGGAGCTATTGGGAATTGGACCAAAGGCAAAGACTTCATAACCCTGAATGAGGCTAAGAGGTATTACTTTATTTGTGGCAATGGCCAATGCTTCAATGGGATGAAAGTCTCTGTTCTTGTCCATCCTCTTCCTCCTCCTCCTGCGTCTGCTGCAACTGCTGCTAACCATTCAACCCCAAACTCTGCTGCACCAATGGTTTTGGTGGGGGGATTTTGGTCTCTGGTCATGTCTTCTGCTTTGCTTTGGTTTGCATGTGGTTGGATGTAG 615 0.4878 MTLIHFICAGGGSSGKSSQKRVSSGVQQRQEQEQVPSMKARMMWLALFAAFASLSAVTSTDHIVGANRGWNPGINYTLWANNQTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTTEGAIGNWTKGKDFITLNEAKRYYFICGNGQCFNGMKVSVLVHPLPPPPASAATAANHSTPNSAAPMVLVGGFWSLVMSSALLWFACGWM 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1857 204 MobiDBLite consensus disorder prediction 12 34 - -
Dere11g1857 204 SUPERFAMILY Cupredoxins 59 157 IPR008972 -
Dere11g1857 204 PANTHER BLUE COPPER PROTEIN 59 169 IPR039391 GO:0009055
Dere11g1857 204 Gene3D - 60 164 IPR008972 -
Dere11g1857 204 FunFam Lamin-like protein 58 159 - -
Dere11g1857 204 Pfam Plastocyanin-like domain 70 150 IPR003245 GO:0009055
Dere11g1857 204 CDD Phytocyanin_like_1 60 156 - -
Dere11g1857 204 ProSiteProfiles Phytocyanin domain profile. 60 158 IPR003245 GO:0009055
Dere11g1857 204 MobiDBLite consensus disorder prediction 11 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1857 Dere-ChrDere11 32490773 32492852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1857 48 166 Phytocyanin Superfamily AT5G15350 47.934 6.74e-40 132