Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1856 ATGCCTTCAAGACCCTTCCCTCCAACTCCAAGTCCCAATTTTTTCACCAAAAACAGGGTCCTCTTCCTGGCTCTCACTATCTCAGCGTCTCTTGTCATTTTCTGCTCTATACTTTACTTCCTTTACCGTCTCTGGAACTCTATTGTACACAAAGCTAAAACCATCCCATTTGATGCAAGTGCTCCCTTGAAGCTTCAAAGATTCTCATATAAAGAGCTAAAGCAAGCCACCAATGGCTTTCACGCGGAAAATGTCATTGGTAAAGGTGGGTCTAGCACCGTTTTCAAAGGAATGCTTAAAGATGGGAAATTTATTGCTATTAAGCGTCTAGATGCTTTGTGCTTACAAACAGAGCAAGAGTTTCATAATGAGCTTCAGATTCTTGGCGGGTTAAGATCTCCCTTTCTTGTGACCCTTTTGGGATATTGTGTGGAAAAGAACAAGAGAGCTTTGGTTTTTGAATATATGCCTAAGAGAAGCTTGCAAGAGTTTCTTTTTCGAGATGATGGATGTTTGAGGTTGAGCTGGGAGAGGAGGTTTCTTATAATAATGGATGTTGCTAGAGCTCTGGAATTCTTACACCTTGGATGTGACCCACCAGTGATTCATGGGGATATCAAGCCAAGCAATGTTCTGCTTGATGAAGAGTACCGTGGGAAGATTTCAGATTTTGGATTGTCAAGGATTAAAGTGGAGGAAGGTGACTTTGGTGGGGACTTGTTTAGCCAGGACTTGGGTGATAAGAGTCAGGAGCTATGGAAGAGCCAAGAGTTTTCAGGTAATTTAACTGCAGAAAGTCCAGCCACTGATACTCCTGTTGAAGGTGTTAATGAAGTAGATTTTGCTCTAGCTTTGCAGGCATCTTCTTCATCCGAAAATAGCAGGGCATGTTTTAATGTTAGAGCTTTGAACTTGAGTTCTTTGAATTATAATGCCTGTATTGCAGGTGAAGATGAAATAAGGAGTAGTGTCAAGGGGAAGGAAATCTCAACTATAGATATTGGTGGCAAAGATTGGAAGAACAAATTTGTTCCGTATGATGATGATTCCAGCATTGATCATAGTAAAGAATTAAATGTTAATGCTTCCTCAGTAGATGAAGGAAAAGCAAATGGAAAACAATGGGGAAAAGACTGGTGGTGGAGACAGGATGAAAGTGGAGAATTATGCAGTAAAGATTATGTCATGGAGTGGATAGGGAGTCAGATTTGTCCATCAAACCCTGTTTGGGATCACGAAAAGAAGAACATTCATGAGAGAACAGAACTACATAATTCAGGTCCAGCAGATAAACCAGATGATGCAAATGGACTCCAATTTAAAACAAAGGGGATAAGAGATACTGATAAAGGGGCTGAGAACAAAAAATCAGCGGGGGAAAAAATTCATAACAAGAAGCCCAGGAAGATGCAAGAGTGGTGGAAGGAAGAGCGCCTAACTGAATTAACCAATAAGAGCCGCAAGCTGAAAAAATTCCAAACTAAGTGGAAGAAAGGGTTCAAAGTACCACATTTTGATTTGGGTAGGAGGTTTTATCTTTGCAGGTGTAAGAACTTTGCAAGGGAAGGTCAGAATGAGCGTGATCTAATTGGGGAGTTTAGTTTCAGAAGAGGTTGGAGGAAGAAAGAAAGTAGTCCGTCCATTGGCAGTGAGATGTGGAGCGGAGATCTTTTCAGCAGCACGACCAGCATGAGAGGGACACTGAGTTATGTCGCTCCAGAATATGGTGGATGTAGGTTCTCAATGGAGAAGGCTGACATTTACAGTTTAGGAGTATTGGTCCTTGTGATTGTTTCAGGAAGAAGACCCTTACATGTTCTACCATCCCCCATGAAGCTGGAGAAAGCTAATTTAGTAAGCTGGTGTAGGCACTTGGCACAAACTGGTAACGTTTTAGAACTTGTAGATGAGAGGTTGAAAGGGAATTACAACAAGGAGCAAGCAAGCTTGTGCATCAATATGGCACTTTCTTGCTCACAGAAAATTCCTGAGTTAAGGCCAGATATTGGGGATATTGTTAAGATTTTGAAGGGGGATATGGATCTCCCACCACTTCAATTTGAGTTCTCTCCTTCTCCACCTTCCAAATTGTACAGCAAACTAAGAAGAAAACAGAAGGGTGCTGCAGAATAG 2133 0.4149 MPSRPFPPTPSPNFFTKNRVLFLALTISASLVIFCSILYFLYRLWNSIVHKAKTIPFDASAPLKLQRFSYKELKQATNGFHAENVIGKGGSSTVFKGMLKDGKFIAIKRLDALCLQTEQEFHNELQILGGLRSPFLVTLLGYCVEKNKRALVFEYMPKRSLQEFLFRDDGCLRLSWERRFLIIMDVARALEFLHLGCDPPVIHGDIKPSNVLLDEEYRGKISDFGLSRIKVEEGDFGGDLFSQDLGDKSQELWKSQEFSGNLTAESPATDTPVEGVNEVDFALALQASSSSENSRACFNVRALNLSSLNYNACIAGEDEIRSSVKGKEISTIDIGGKDWKNKFVPYDDDSSIDHSKELNVNASSVDEGKANGKQWGKDWWWRQDESGELCSKDYVMEWIGSQICPSNPVWDHEKKNIHERTELHNSGPADKPDDANGLQFKTKGIRDTDKGAENKKSAGEKIHNKKPRKMQEWWKEERLTELTNKSRKLKKFQTKWKKGFKVPHFDLGRRFYLCRCKNFAREGQNERDLIGEFSFRRGWRKKESSPSIGSEMWSGDLFSSTTSMRGTLSYVAPEYGGCRFSMEKADIYSLGVLVLVIVSGRRPLHVLPSPMKLEKANLVSWCRHLAQTGNVLELVDERLKGNYNKEQASLCINMALSCSQKIPELRPDIGDIVKILKGDMDLPPLQFEFSPSPPSKLYSKLRRKQKGAAE 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1856 710 FunFam Os07g0541700 protein 156 238 - -
Dere11g1856 710 MobiDBLite consensus disorder prediction 423 470 - -
Dere11g1856 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Dere11g1856 710 FunFam Receptor-like serine/threonine-protein kinase At4g25390 49 155 - -
Dere11g1856 710 Pfam Protein kinase domain 80 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1856 710 PANTHER OS07G0586332 PROTEIN 11 705 IPR044576 -
Dere11g1856 710 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Dere11g1856 710 MobiDBLite consensus disorder prediction 443 470 - -
Dere11g1856 710 SMART serkin_6 80 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1856 710 Gene3D Phosphorylase Kinase; domain 1 46 155 - -
Dere11g1856 710 Gene3D Transferase(Phosphotransferase) domain 1 156 261 - -
Dere11g1856 710 Gene3D Transferase(Phosphotransferase) domain 1 530 682 - -
Dere11g1856 710 SUPERFAMILY Protein kinase-like (PK-like) 60 695 IPR011009 -
Dere11g1856 710 MobiDBLite consensus disorder prediction 691 710 - -
Dere11g1856 710 ProSiteProfiles Protein kinase domain profile. 80 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1856 Dere-ChrDere11 32485021 32487153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1856 548 676 Receptor kinase-like Gene Family AT3G58690 31.538 1.05e-11 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Dere11g1856 Pkinase 1.7e-27 CL0016