Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1849 ATGGACAATGAGGAAATTCCATCAATGCCTTCAACACCTGCAACACCAGGGACTCCTGGGGCACCTCTTTTTGGTGGATTTAAGTCGGAGAGAAAAAATGGGAATGGTTATGGTGCGAAATCGCTTCTCAAGAATTGCCAGTGTTTCAGGGTTGAAGAATGGACCGTAGAAGAAGGAGCTTTACCCAAAGTCACTTGCTCATTGCCACCCCCTCCTATCCCTCTTGCAAAGAAGGTAGGAGCTGAGTTTATAGGCACTCTCATTCTCATGTTTGCCGGGACAGCCGCTGCTATTGTGAACCAGAAGACACAAGGCTCCGAGACTCTAATTGGATGCGCTGCCTCCACAGGCCTCGCCGTCATGATCGTCATCCTCTCCACCGGCCACATCTCCGGCGCTCATCTCAACCCCGCCGTCACCATTTCCTTTGCTGCATTAAAGCACTTCCCATGGAAACAAGTGCCTGTGTACATTGGTGCCCAAGTTATGGCGTCAATATGTGCAGCATTTGCACTGAAGGGGATATTTCATCCCTTCATGAATGGGGGAGTCACAGTTCCTTCAGGAGCGTACGGCCAAGCATTTGCTTTGGAGTTCATCATCAGCTTTAACCTCATGTTCGTTGTCACTGCAGTGGCCACCGACACGAGAGCAGTGGGAGAGCTTGCGGGAATCGCGGTGGGAGCGACAGTCATGCTCAACATACTTATAGCTGGGCCTGCATCAGGAGCCTCAATGAACCCAGTAAGAACACTAGGTCCAGCAATTGCAGCGAACAACTACAAGGCCATATGGGTGTATCTCATAGCTCCGATAATTGGAGCTCTAAGTGGGGCAGGTATCTACACTTTAGTCAAGCTCAGTGATGAACAGGAAGAAGAAGCCAAGGGAAGGACTTCAACCCCCGGGAGCTTCAGAATGTGA 924 0.5043 MDNEEIPSMPSTPATPGTPGAPLFGGFKSERKNGNGYGAKSLLKNCQCFRVEEWTVEEGALPKVTCSLPPPPIPLAKKVGAEFIGTLILMFAGTAAAIVNQKTQGSETLIGCAASTGLAVMIVILSTGHISGAHLNPAVTISFAALKHFPWKQVPVYIGAQVMASICAAFALKGIFHPFMNGGVTVPSGAYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPASGASMNPVRTLGPAIAANNYKAIWVYLIAPIIGALSGAGIYTLVKLSDEQEEEAKGRTSTPGSFRM 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1849 307 Gene3D Glycerol uptake facilitator protein. 72 299 IPR023271 -
Dere11g1849 307 MobiDBLite consensus disorder prediction 1 26 - -
Dere11g1849 307 CDD MIP 77 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere11g1849 307 FunFam Aquaporin NIP2-1 65 297 - -
Dere11g1849 307 ProSitePatterns MIP family signature. 134 142 IPR022357 -
Dere11g1849 307 PANTHER AQUAPORIN NIP2-1 44 291 IPR034294 -
Dere11g1849 307 Pfam Major intrinsic protein 76 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere11g1849 307 PRINTS Major intrinsic protein family signature 77 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere11g1849 307 PRINTS Major intrinsic protein family signature 116 140 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere11g1849 307 PRINTS Major intrinsic protein family signature 153 172 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere11g1849 307 PRINTS Major intrinsic protein family signature 197 215 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere11g1849 307 PRINTS Major intrinsic protein family signature 228 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere11g1849 307 PRINTS Major intrinsic protein family signature 265 285 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dere11g1849 307 SUPERFAMILY Aquaporin-like 74 290 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1849 Dere-ChrDere11 32401023 32403419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1849 1 306 Major Intrinsic Protein MIP AT1G80760 77.670 1.37e-168 468