Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1846 ATGGACGCTGAACAAGGTCAATCGAGGAACATCCTCCTCGACAAGTACGAGATGGGGAGACTCCTGGGCCAAGGGAACTTCGCCAAGGTCTACTATGGCAGAAACCTCGTCACCAACGAAAGCGTAGCCATCAAGGTAATCAAGAAGGAGAAGCTGGAAAATGGGAAGCTCGTGAAGCAGATCAAGCGTGAAGTCTCTGTAATGCGATTGGTCCAACACCCACACATCGTGGAGCTGAAAGAAGTCATGGCCACTAAAGGGAAGATCTTTCTGGTCATGGAGTACGTGAAAGGCGGCGAATTGTTTGCCAAAGTCGCGAAAGGAAAATTGAACGAAGATTTAGCGAGAAAGTATTTCCAGCAATTGATTTCCGCCGTCGATTTCTGTCACAGCCGCGGCGTCACGCACCGCGATCTGAAGCCCGAGAATCTGTTCCTCGACGAAAACGAGGATCTTAAAGTTGCCGACTTTGGCATGTCGGCCTTGCCGGAGCAACGCCGGTCGGACGGGATGCTCGTAACGCCGTGCGGGACGCCGGCATACGTGGCGCCGGAGGTTTTGAAGAAGAAAGGGTATGATGGGTCGAAAGCAGATATATGGTCATGTGGGGTAATTCTCTATGCTTTGCTTTCTGGGTATCTTCCATTCCAAGGCGAGAATGTCATGAGAATTTACAAGAAAGCATTCAAAGCAGCGTACATATTCCCAGACTGGATTTCACCAGGAGCCAGGAATATGATCTCTAAATTGCTCGTTGCCGACCCAGAAAAGAGGAATTCGATTGAAGATATCATGAATGATCCGTGGTTTCAATACGGGTTCATGAGACCAATTGCATTCTCAATAAAGGAGCCAACTGTGGAAGATTTCAACGACAACGACAACATCGAAGAAGTGGAAGAAATGGTAGGAAATGAAAAGGAAAAGCAAGCACGTCCATTTTACAACGCGTTCGAGATTATTTCATCGCTGTCACACGGGTTTGATCTGAGAAGCTTGTTTGAGACAAGGAAGAGATCGCCGTCGATGTTCATATCAAAGTTTTCGGCGGCGGCGGTGGTGGGGAAGCTGGAGGCGGTGGCGAACAAGCTGAATTTCAGGATAACGGGGAAGAAGGAGTACATGGTGAGGATGCAGGGGACGAAGGAGGGAAGAAAGGGGAAGCTGGGGATGACGGTGGAGGTTTTCGAGGTGGCGCCGGAGGTGGCGGTGGTGGAATTCTCCAAGTCCGCCGGCGACACCTTGGAGTACGTCAAGTTTTGTGAAGAGGAGGTGAGGCCAGCCCTCAAAGACATCGTCTGGAGTTGGCAGGGTGACACAAACCCTACTCCATGA 1335 0.5026 MDAEQGQSRNILLDKYEMGRLLGQGNFAKVYYGRNLVTNESVAIKVIKKEKLENGKLVKQIKREVSVMRLVQHPHIVELKEVMATKGKIFLVMEYVKGGELFAKVAKGKLNEDLARKYFQQLISAVDFCHSRGVTHRDLKPENLFLDENEDLKVADFGMSALPEQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFQGENVMRIYKKAFKAAYIFPDWISPGARNMISKLLVADPEKRNSIEDIMNDPWFQYGFMRPIAFSIKEPTVEDFNDNDNIEEVEEMVGNEKEKQARPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFISKFSAAAVVGKLEAVANKLNFRITGKKEYMVRMQGTKEGRKGKLGMTVEVFEVAPEVAVVEFSKSAGDTLEYVKFCEEEVRPALKDIVWSWQGDTNPTP 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1846 444 ProSitePatterns Protein kinases ATP-binding region signature. 22 49 IPR017441 GO:0005524
Dere11g1846 444 Pfam NAF domain 314 369 IPR004041 GO:0007165
Dere11g1846 444 ProSiteProfiles NAF domain profile. 310 335 IPR018451 GO:0007165
Dere11g1846 444 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 430 - -
Dere11g1846 444 Gene3D Transferase(Phosphotransferase) domain 1 96 274 - -
Dere11g1846 444 FunFam Non-specific serine/threonine protein kinase 310 434 - -
Dere11g1846 444 FunFam Non-specific serine/threonine protein kinase 7 95 - -
Dere11g1846 444 ProSiteProfiles Protein kinase domain profile. 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1846 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Dere11g1846 444 CDD CIPK_C 316 430 - -
Dere11g1846 444 SMART serkin_6 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1846 444 Gene3D Phosphorylase Kinase; domain 1 5 95 - -
Dere11g1846 444 SUPERFAMILY Protein kinase-like (PK-like) 12 291 IPR011009 -
Dere11g1846 444 Gene3D Kinase associated domain 1, KA1 310 435 - -
Dere11g1846 444 Pfam Protein kinase domain 16 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1846 444 FunFam Non-specific serine/threonine protein kinase 9 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1846 Dere-ChrDere11 32363101 32364435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1846 7 443 CBL-interacting serine-threonine protein kinases AT5G10930 62.100 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere11g1846 Pkinase 3.3e-74 CL0016