Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1824 ATGATGGATCAACTTCGTAGATATGGCAACGTGATAAACAACTGGGAGTTGCGAGAAAAGAGTGATGGAAATCAGAGAGAAAAAGGAACCACTCTCGCTGAATCTCTTCTAAACCCTAACCTTCCGAAGCCTCAATCGTCCGCCATGGCTCTCCTTCTCCAACTCAGAACGAGAACCAATAAGAGCACTCTCACAAACCCTTCTCTGTTCCACCTCTTCTCTACCTCGAATTCCAACGACGATGAACCCGACTCTACCACCACCACCACCTCCGATGATCGTGCTTCTGCAAACCCTAATACGCACTTCTCTTCCTATGTCAGCGATGTCAAGAAGGTGCTCAAACAACGCCAAACCCCCCCGCCCTCGTCGACTCTCAGAAACCCATTGAATTCATCTTCTACTGCGTCAGGTTCTGTGCCGCAGGCGCCATCTAAAGCTGCTTCTTTTGAGGAAATCCGAAAGAACCTGTCCGAGTTTCGGCGTCGTTACTCTGACCCAAATTCGACGACATCGTCTACACCTTCACCGAATCCAATCTCATTTCAGGAGATCTATAAGAGAAATCTGGTCGGAAAACCTGGTGAATCGACGCCGAATGCTGGTTTGGGACCTGGAAAACCCGGGGGCAAACTTTCTTTCGATGCGATTCGTGAAAGCGTGCGGAATAGAGTGCGAAATATTCAGCCTACTGGGATTGACAAAAAGGACGTGGATCCAATGTCGTTATCGGCATTTACCGAGAGTTTAAGAATGAAGCCTTCTGACTCCACTGGTTCTCGGACACCGTCAACGGTGATTGGGGGGACGGGTACATTGCCAGCGTCAGTTTTTGGCAAGGAGTTGAGGGAGAAGGAGGAGGGAGAAAGCTCGGAAGAAATGAAGATGGAGTTTTTGAAGATGTATGAGCATGAAGAGTTGGGAGACAGATTGAGAAAATTGAGGCCGGAAGCAAAAGGAGGGGACTGGTTTTCTCTGAGGGAGTTGAGCGAGAGGTTGATGAAATTGAGGGAAATGGAAGAGAAGGAGACTGAGGAGTCCTCTATTAAGGGGCTTACTGTCAAGGATTTGAGAGAGGTCTTGATTCGGGTGAAGATTTCTGAGGATAAGACTAAGAAAAGTTCGCTGCAGAGACTTGATATACTGGGTGAGCTGGGCAGGACTCCAAGCTTCATGCTGCAGCCTCCTAAAGAGCATCTTGTTGAAAAGTATTTCCATCCAGATAATATGTCTTCAGCAGAGAAGTTGAAAATCGAGCTTGCAAGAGTTAGGGATGAGTTTAAAATGTCAGAGTCAGATTGTGGATCTTTTCGTGTTCAGGTTGCACAACTCACAACTAAGATTCATCATCTATCAGCAGTTCTACACAAGAAGGATAAGCATTCTCGTAAAGGCCTGCTAGCAATGGTTCAGAAGAGGAAAAGGTTACTGAAATACCTCAGAAGAACTGACTGGGAGTCCTACTGTTTTGTGATTTCCAAGCTAGGTCTACGTGATAATCCAGATATTAAGTACTGA 1518 0.4651 MMDQLRRYGNVINNWELREKSDGNQREKGTTLAESLLNPNLPKPQSSAMALLLQLRTRTNKSTLTNPSLFHLFSTSNSNDDEPDSTTTTTSDDRASANPNTHFSSYVSDVKKVLKQRQTPPPSSTLRNPLNSSSTASGSVPQAPSKAASFEEIRKNLSEFRRRYSDPNSTTSSTPSPNPISFQEIYKRNLVGKPGESTPNAGLGPGKPGGKLSFDAIRESVRNRVRNIQPTGIDKKDVDPMSLSAFTESLRMKPSDSTGSRTPSTVIGGTGTLPASVFGKELREKEEGESSEEMKMEFLKMYEHEELGDRLRKLRPEAKGGDWFSLRELSERLMKLREMEEKETEESSIKGLTVKDLREVLIRVKISEDKTKKSSLQRLDILGELGRTPSFMLQPPKEHLVEKYFHPDNMSSAEKLKIELARVRDEFKMSESDCGSFRVQVAQLTTKIHHLSAVLHKKDKHSRKGLLAMVQKRKRLLKYLRRTDWESYCFVISKLGLRDNPDIKY 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1824 505 Gene3D - 465 500 - -
Dere11g1824 505 Coils Coil 326 346 - -
Dere11g1824 505 SUPERFAMILY S15/NS1 RNA-binding domain 420 499 IPR009068 -
Dere11g1824 505 SMART Ribosomal_S15_2 420 498 IPR000589 GO:0003735|GO:0005840|GO:0006412
Dere11g1824 505 Hamap 30S ribosomal protein S15 [rpsO]. 410 499 IPR005290 GO:0003735|GO:0005840|GO:0006412
Dere11g1824 505 MobiDBLite consensus disorder prediction 163 183 - -
Dere11g1824 505 NCBIfam 30S ribosomal protein S15 422 498 IPR005290 GO:0003735|GO:0005840|GO:0006412
Dere11g1824 505 PANTHER S15/NS1, RNA-BINDING PROTEIN 49 504 - -
Dere11g1824 505 MobiDBLite consensus disorder prediction 117 144 - -
Dere11g1824 505 Pfam Ribosomal protein S15 423 498 IPR000589 GO:0003735|GO:0005840|GO:0006412
Dere11g1824 505 MobiDBLite consensus disorder prediction 73 211 - -
Dere11g1824 505 Gene3D - 416 463 - -
Dere11g1824 505 MobiDBLite consensus disorder prediction 249 271 - -
Dere11g1824 505 CDD Ribosomal_S15p_S13e 422 496 IPR000589 GO:0003735|GO:0005840|GO:0006412
Dere11g1824 505 Coils Coil 413 433 - -
Dere11g1824 505 MobiDBLite consensus disorder prediction 73 107 - -
Dere11g1824 505 MobiDBLite consensus disorder prediction 249 274 - -