Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1806 ATGAGTCTAATCAGACAGCATTCTTGGTCATTTAATTTAAATTTGATGGATACCAATAATTGGAAACCTACTCAAGGCACTGAACCAACTATGGATACAAGTGATTGGAGAGCTCAACTGCAACCTGATTCACGCCAAAGAATTGTCAACAAAATAATGGAAACACTGAAAAGACATCTTCCATGTTCTGGTCAAGAGGGATTGCATGAGCTTCGGAAGATTGCTCAAAGGTTTGAAGAGAAAATTTATACTGCTGCAACAAGCCAGCCTGATTATCTGCGGAAAATATCTCTAAAGATGCTTACAATGGAGACTAAATCCCAGAGCGCGATTGGCAACCCTATGCCATCAAATCCAGGTGGCCCTAGCAATAAACCTCCTGATCCAGGATTAATGCAGTCTCAAGTTCAAAATCCAGGGCAGTCACATCCTATTCCTTTGCCTAATCAGACCCAATCACGTCAACAGATTCTATCTCAAAACATTCAAAATAACATTGCACCTCAACCTAACCTGTCATCTGCAGCAAATATAGGCCAGACTCAGATGCAGAACATTGGCCAAAATTCCAATATGCAGAACATGCCTGGACAGAACTTAGTGGGGAGCACTATTGGCCAGAATTCTAGCATGCAGAATATGTTTCCTGGTTCTCAGAGACAAATGCCAGGAAGGCAGCAGGTTGTTGGCCAACAGCAACAGCAGCAACCACAGAATCCACAGTATATTTACCAACAGCAACAGCTTCATCAGCAGCTTTACAAGCATAAGCTCCAGCATCCTCACTCACTCATGCAAATCCAACAGCAGCAGCAGCAGCAGCCACCGCAACAGCAGCAACCACAGCAGCAGCAGAACCTTCTGCAACCAAATCAGTTGCAGTCAAATCAGCAGTCTGTTATGCAAACATCGTCTGTCATGCAGCCTTCCATGATGCAAACTCCTTCTCTATCTAGCCTTCAGCAGAATCAACAGTCTAATAATGTTCAATCATCAACTCAATCCATGCTTCAACAACATCCCCAGTCAGTTATGAGGCAGCAGCAACAGCAACAGCAACAGAATTCTATTCATCAGCAACAAACACCAATGACCCAACAGCCAATATTGCCTCCACAGCAGCAGCAGCAGCAGCAGCTTATGGGGCAACAGTCAAATGCAACAAATTTGCAACATACTCAGCTACTTGGGCAACAGAGTAGTGTTGGTGATATGCAACAACAACAGAGGTTGATTGGACAGCAAAATAATCTTACAAACCTGCAGCAGCACCAGCAACAGCAACAGTTAATAAATCAGCAAAGCAATCTCTCAAATATGCATCAACAACAGTTGGGAAATAATGTCCCTGGGCTACAGCAGCAGCAGCAGTTGCTTGGACCTCATTCTGGCAACTCTTCCATGCAAAGTACCCAGCACTCTGCACAAATGCTACAACAATCAAAGGTTCCAATGCAGCAACAATCACAACAAAATGCTTCAAATTTGTTACCATCTCAAGTGCAGCAACAACAGCCACAGGTTTCACAGCAGCAACTGATGTCCCAGATTCAATCTCAGCCTGTACAGCAACAGCAATTGGGTTTGCAGCAGCAGCCAAATCCACTGCAACGAGATATGCAGCAAAGGCTTCAAGCATCAGGTTCCTTACTTCAACAGCAAAATGTACTTGATCAACAAAAACAGTTGTATCAACCACAAAGAGCCCTTCCAGAAACATCATCAACTTCTCTAGATTCAACAGCACAGACTGGACAATCAAGTGGGGGTGATTGGCAAGAAGAAGTGTACCAAAAGATCAAAGGCATGAAGGAAACATACTTGCCAGAATTGAATGAAATGTACCAGAAAATTGCTGCTAAACTTCAGCAGCATGATTCCCTTCCACAACAACCAAAGTCAGAACAGCTTTCCAAGCTGAAGATATTTAAAACGATGTTGGAGCGTATTATAGCATTCTTACAGGTTTCCAAGAGCAACATTGTACCTAGTTTCAAGGAAAGATTGGGTTCATATGAGAAGCAGATTATAAATTTCATAAGTACAAATAGGCCCAGAAAAGGCATGTCTTCGCTGCAGCTTCCCCCCTCTTCTATGCATCCCATGCCACAGCCACAATCCCAGCTTATTCCAGTGCAGTCTCATGAAAATCAAATAAACTCTCAGTTGCAACCAACAAATATACAAGGTTCTTTAACAATGTCTCAGAACAATATGTCAAGTTTGCAGCACAATTCAATGTCTGGTGTATCTACAGCACCGCAGAGTATGATGAATTCCATGCAACCAGGTGCTAATTTAGATTCAGGACAAGGAAATGCTATGAACTCCCTGCAGCAGGTTCCAGTGAGCTCCCTTCAACAAAACACAGTCAGTGCTCCCCAACAGACTAACATGAACCCCTTATCGTCGCAAGGTGGGGTAAATGTAATCCAATCAAATCTAAACCTGCATCAGTCAAGTTCCAGTATGCTTCAACACCAGCAACTGAAACAGCAGCAGGAACAGCAGATGTTTCATAATCAGCATCTCAAACAACTTCAGCAGCGGCAGATGATGCAGAGGCAGCAGATGCTTCAACAGCAGCAACAATTACACCAGCCAACAAAGCAACAGCTGCCCGCACAATTGCAGACACATCAAATGCCGCAGCTTCACCAAGTGAATGATGTAAATGATATGAAGATGAGACAAGGAATGGGCGTTAAGCCAGGGGTCTTTCAGCAACATCTTTCCTCAGGTCAACGCCAAGCTTATCCCCATCAGCAGTTGAAACAGGGGAGTCCATTTCCTGTTTCTTCGCCCCAACTCCTACAGACTGCATCTCCTCAGATTTCACAACATTCGTCTCCCCAGATTGATCAACAAAATCTTCTTCCATCTGTCCCAAAAGTTGGGACCCCGCTGCAATCTGCTAACTCACCATTTGTGGTTCCCACTCCTTCACCTCCCTTGGCTCCATCTCCTATGCCAGTAGATTCTGAGAAGCCAACTTCTGGTGTTTCATCAATAACAAATGCTACAACTATTGGGCATCAACAAACTGGGGTTGCAGCTGCACCAGCTCAGTCCCTTGCCATTGGGACTCCTGGGATATCAGCCTCTCCTTTGCTGGCTGAGTTCAGTGGTCCAGATGGTGCTCATGGCAATGCTTTAGCAGCCACTTCTGGAAAGTCAACTGTTACAGAGCAGCCTCTTGAACGCTTAATTAAAGCGGTGAAATCAATGTCACCTAAAGCATTAGGTGCCACTGTAGGTGATATTGGCTCAGTTGTCAGCATGATTGATAGGATAGCAGGATCAGCTCCGGGCAATGGATCCAGAGCTGCAGTTGGTGAGGATTTGGTTGCAATGACTAAGTGTCGTCTTCAGGCCAGGAATGTAGTTAACCAGGATGGAACCAATGGAACCAAAAGGATGAGACGCTACACCAGTGCCTTGCCTTTGAATGTTGTATCATCTGCTGGTAGCATGAATGATAGCATCAAGCACTTAACTGCTTCAGAGGCTTCTGATCTGGAGTCAACTGCAACATCAAGTATCAAGAAGCCAAGGATTGAGGCTAATCATGCCCTTTTGGAAGAGATAAGGGAGATTAATCAACGACTCATAGATACGGTAGTAAATATAAGTGATGAGGATGTTGATCCAACTGCTGCTATTGCTGTTGCTGAAGGGGCAGAAGGGACCATTGTCAAGTGTTCTTTCTGTGCCGTAGCTCTCAGTCCACGCTTGAAATCACAATATGCTTCAGTACAGATGTCACCAATTCAACCCCTTTGGTTGCTTGTTCCTGCAAATTATCCCAATTGTTCCCCAATACTCCTAGACAAGTTTCCAATTGAACCCAGTAAGGAGAATGAAGATCTGTCAGTGAAGGCAAAGTCAAGGTTTAGCATATCCCTGCGAAGCTTATCGCAACCTATGTCACTCGGTGAGATAGCAAGGACTTGGGATGTTTGTACTCGTGCGGTTATTTCTGAACACGCACAGCAGAGTGGCGGAGGGAGCTTCAGCTCTAAGTATGGGACTTGGGAGAATTGCTTGAGCACTGCATAG 4059 0.4457 MSLIRQHSWSFNLNLMDTNNWKPTQGTEPTMDTSDWRAQLQPDSRQRIVNKIMETLKRHLPCSGQEGLHELRKIAQRFEEKIYTAATSQPDYLRKISLKMLTMETKSQSAIGNPMPSNPGGPSNKPPDPGLMQSQVQNPGQSHPIPLPNQTQSRQQILSQNIQNNIAPQPNLSSAANIGQTQMQNIGQNSNMQNMPGQNLVGSTIGQNSSMQNMFPGSQRQMPGRQQVVGQQQQQQPQNPQYIYQQQQLHQQLYKHKLQHPHSLMQIQQQQQQQPPQQQQPQQQQNLLQPNQLQSNQQSVMQTSSVMQPSMMQTPSLSSLQQNQQSNNVQSSTQSMLQQHPQSVMRQQQQQQQQNSIHQQQTPMTQQPILPPQQQQQQQLMGQQSNATNLQHTQLLGQQSSVGDMQQQQRLIGQQNNLTNLQQHQQQQQLINQQSNLSNMHQQQLGNNVPGLQQQQQLLGPHSGNSSMQSTQHSAQMLQQSKVPMQQQSQQNASNLLPSQVQQQQPQVSQQQLMSQIQSQPVQQQQLGLQQQPNPLQRDMQQRLQASGSLLQQQNVLDQQKQLYQPQRALPETSSTSLDSTAQTGQSSGGDWQEEVYQKIKGMKETYLPELNEMYQKIAAKLQQHDSLPQQPKSEQLSKLKIFKTMLERIIAFLQVSKSNIVPSFKERLGSYEKQIINFISTNRPRKGMSSLQLPPSSMHPMPQPQSQLIPVQSHENQINSQLQPTNIQGSLTMSQNNMSSLQHNSMSGVSTAPQSMMNSMQPGANLDSGQGNAMNSLQQVPVSSLQQNTVSAPQQTNMNPLSSQGGVNVIQSNLNLHQSSSSMLQHQQLKQQQEQQMFHNQHLKQLQQRQMMQRQQMLQQQQQLHQPTKQQLPAQLQTHQMPQLHQVNDVNDMKMRQGMGVKPGVFQQHLSSGQRQAYPHQQLKQGSPFPVSSPQLLQTASPQISQHSSPQIDQQNLLPSVPKVGTPLQSANSPFVVPTPSPPLAPSPMPVDSEKPTSGVSSITNATTIGHQQTGVAAAPAQSLAIGTPGISASPLLAEFSGPDGAHGNALAATSGKSTVTEQPLERLIKAVKSMSPKALGATVGDIGSVVSMIDRIAGSAPGNGSRAAVGEDLVAMTKCRLQARNVVNQDGTNGTKRMRRYTSALPLNVVSSAGSMNDSIKHLTASEASDLESTATSSIKKPRIEANHALLEEIREINQRLIDTVVNISDEDVDPTAAIAVAEGAEGTIVKCSFCAVALSPRLKSQYASVQMSPIQPLWLLVPANYPNCSPILLDKFPIEPSKENEDLSVKAKSRFSISLRSLSQPMSLGEIARTWDVCTRAVISEHAQQSGGGSFSSKYGTWENCLSTA 1352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1806 1352 MobiDBLite consensus disorder prediction 187 241 - -
Dere11g1806 1352 MobiDBLite consensus disorder prediction 852 877 - -
Dere11g1806 1352 MobiDBLite consensus disorder prediction 911 1002 - -
Dere11g1806 1352 MobiDBLite consensus disorder prediction 456 504 - -
Dere11g1806 1352 MobiDBLite consensus disorder prediction 977 991 - -
Dere11g1806 1352 FunFam Mediator of RNA polymerase II transcription subunit 15a 35 113 - -
Dere11g1806 1352 SUPERFAMILY Kix domain of CBP (creb binding protein) 33 106 IPR036529 GO:0003712|GO:0006355
Dere11g1806 1352 MobiDBLite consensus disorder prediction 686 707 - -
Dere11g1806 1352 MobiDBLite consensus disorder prediction 567 593 - -
Dere11g1806 1352 Gene3D Coactivator CBP, KIX domain 35 112 IPR036529 GO:0003712|GO:0006355
Dere11g1806 1352 MobiDBLite consensus disorder prediction 911 976 - -
Dere11g1806 1352 Pfam KIX domain 34 112 IPR036546 -
Dere11g1806 1352 MobiDBLite consensus disorder prediction 258 386 - -
Dere11g1806 1352 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 915 1341 IPR044661 GO:0003713|GO:0031490
Dere11g1806 1352 Coils Coil 830 864 - -
Dere11g1806 1352 MobiDBLite consensus disorder prediction 128 154 - -
Dere11g1806 1352 MobiDBLite consensus disorder prediction 105 154 - -
Dere11g1806 1352 MobiDBLite consensus disorder prediction 262 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1806 Dere-ChrDere11 31966835 31977247 Dispersed/Wgd