Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1792 ATGGCATCTCCAAAGGATGAAGAACAAAGGACAGAGTGTCAAGGAAGAACTGACGATTCAAGGGACGTTAGGCCAAACGCAAAGCAGAGGAGGTTAGGGCAAAGCCACCTCTCGTACTTCGACGGAGCGCATGTGAGCTGTCGTCAGACCATGACCGGCGATACCTCGTATTCTCCGGACGACAAGACCTTGTCGCCGAGTCACAACCTCGATATCACGATAGAGGAAGGATCTCCAAACACTGAGCAATTACTTGAGGTTGATGTGGGAAATGACTTTAAAAATGACTGTGGACAGCTATTTGAGATTGATGGAAATGAACAAGAAAATGGGAGAGATGAAACAACGGTAGTTGATTGTCACAGTGGAGAATCTCACTTAAAAGACTATCCTCCGCCAGTTGTAGGGATGGAGTTTGATACATATGATGATGCCTACAACTACTACAATAGCTATGCCAAGGAACTTGGGTTTGCTATTAGGGTTAAATCGTCGTGGACCAAACGTAACAGCAAAGAGAAACGTGGTGCCGTGCTCTGCTGCAACTGTGAGGGTTTCAAAACAGTTAAAGAAGCAAATAGTCGTAGGAAAGAAACAAGGACAGGCTGTCTTGCAATGATTAGGTTGAGATTGGTGGAATCTAACAGGTGGAGGGTGGATGAGGTTAAGCTTGAACATAACCATTCATTTGATCCTGAAAGAGTACAAAACTCTAAATCACATAAGAGGATGGACATTGGGGCTAAAAGAAAGGTTGAGCCAACTCTAGATGTTGAAGTACAAACAATCAAGCTGTATCGAACACCTGTTGTAGATGCATTGGGTTATGGAAGCTCAAATGCTAATGAAGAGGGAACTAACAACCATGTTAATTTTTCCAGGCATTTGAAACTTCAAAAAGGAGATGCAGAAGTTATTTCAAACTACTTCTGCCACAGTCAACTATTGAATCCTCATTTTTTTTATGTGATGGATCTGACCGATGATGGACACATAAGGAACATCTTTTGGATTGATTCTAGATCAAGGGCTGCATATGGTTACTTTGGAGATGTGGTTGCATTTGATTCAACATGTTTGTCAAACAACTATGAGATACCACTGGTTGCGTTTGTTGGTGTTAATCACCATGGGCAATCGATTTTGTTAGGATGTGGTCTGCTTGCTGATGAGACATATGAAACATACATTTGGTTATTTAGGGCATGGCTTACTTGTATGTCTGGTCGCCCTCCGCAAACTATCATTACGAACCAGTGTAAAGCTATGCAAAGTGCAATAGCAGAGGTTTTCCCTAGAGCTCACTATAAAATTTGTCTTTCACAAGTCATGCAGAGCATTCTTGGTGACTTGGCACTGTTGCAGGAATATGAGGCATTTGAGATGGCATTGACTAAAGTGATATATGAGTCTAAAACAGTTGATGAGTTTGAGAGGGCTTGGGATGATTTGACCCACCATTTTGGAATAAGCAATCATGAGAAGCTCCAGACCTTGCATGAAGAACGGGAGCGTTGGGCCCCAGTTTATTCCAAGGACACATTTTTTGCTGGAATTTCTGATGATGAAAAGGGTGAGGCCTTGAGTCCCTTTTTCCATGATTATGTGCATCATCAGACTTCTTTGAAAGAATTTTTTGACATTTTTGAATTAGTGCTAGAAAAGATGTATCAGAAAGAAGCTCTTGCTGATTTAGAGTCAAGAGATTCAAGCCCCTTACTGAAAACAAGATGCTACTATGAGTTGCAGCTCTCAAAATTGTACACAAATGCAATATTCAGTAAGTTCCAAGATGAGGTGGTGATGATGTCTTCTTGTTTCAGCATCACTCAAATTCAAACAAATGGGTCTATAGTGACGTACATAGTTAAAGAACGTGGAGCGGAAGAGTCAATGAGGGATGTCAGGCATTTTGATGTCATGTATGATAAGGCAGGACCAGAAGTTCGCTGCAACTGTAGCTGCTTTAACTTCAAAGGCTATCTATGCAGGCATGCCTTGTGTATCCTTAATTATAATGGTGTGGAGGAAATTCCATGTCAGTATATTTTGTCAAGATGGAGGAAGGATTATAAGAGATTGTATGTACCACATCTCAGCTCCAACAATGTTGATATCACCAACCCCGTTCAGTGTTATGATCATTTGTACAGACGGGCTATGCAGGTTGTTGAAGAAGGGATGGTATCCCAAGATCATTATATGGTTGCCTGGCAGGCATTTAAAGAGTCCTTGAATAAGGTCCGCCTTGTAGCAGACAAGATTGAATAA 2271 0.4148 MASPKDEEQRTECQGRTDDSRDVRPNAKQRRLGQSHLSYFDGAHVSCRQTMTGDTSYSPDDKTLSPSHNLDITIEEGSPNTEQLLEVDVGNDFKNDCGQLFEIDGNEQENGRDETTVVDCHSGESHLKDYPPPVVGMEFDTYDDAYNYYNSYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTVKEANSRRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHSFDPERVQNSKSHKRMDIGAKRKVEPTLDVEVQTIKLYRTPVVDALGYGSSNANEEGTNNHVNFSRHLKLQKGDAEVISNYFCHSQLLNPHFFYVMDLTDDGHIRNIFWIDSRSRAAYGYFGDVVAFDSTCLSNNYEIPLVAFVGVNHHGQSILLGCGLLADETYETYIWLFRAWLTCMSGRPPQTIITNQCKAMQSAIAEVFPRAHYKICLSQVMQSILGDLALLQEYEAFEMALTKVIYESKTVDEFERAWDDLTHHFGISNHEKLQTLHEERERWAPVYSKDTFFAGISDDEKGEALSPFFHDYVHHQTSLKEFFDIFELVLEKMYQKEALADLESRDSSPLLKTRCYYELQLSKLYTNAIFSKFQDEVVMMSSCFSITQIQTNGSIVTYIVKERGAEESMRDVRHFDVMYDKAGPEVRCNCSCFNFKGYLCRHALCILNYNGVEEIPCQYILSRWRKDYKRLYVPHLSSNNVDITNPVQCYDHLYRRAMQVVEEGMVSQDHYMVAWQAFKESLNKVRLVADKIE 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1792 756 Pfam MULE transposase domain 352 445 IPR018289 -
Dere11g1792 756 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 124 749 IPR031052 GO:0006355
Dere11g1792 756 SMART 26again6 649 676 IPR006564 GO:0008270
Dere11g1792 756 MobiDBLite consensus disorder prediction 1 29 - -
Dere11g1792 756 Pfam SWIM zinc finger 649 667 IPR007527 GO:0008270
Dere11g1792 756 ProSiteProfiles Zinc finger SWIM-type profile. 638 674 IPR007527 GO:0008270
Dere11g1792 756 Pfam FAR1 DNA-binding domain 147 231 IPR004330 -
Dere11g1792 756 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1792 Dere-ChrDere11 31792624 31796494 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dere11g1792 MULE 9.3e-27 CL0219