Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1791 ATGTCTATAGCTGCTGGCCATGGTTGTTCATATAGATGTAAAATTCATCCAACCCTACGCGGAATAAAGGTCGATTCCTCAAATGTTGGATTTGGTTGGAGCAGGATTAGATTGGTTGGGATAGATTCTATGAAGGAACTTACTTTGCTGTCAAGTCTTATTATGCATTTAAGAGAAGCTCTGGACCCAATTCTTCCAAACCCTGAATGAGGAGAGAAAGTTGGTCTTGGGGACAAGGTAGCTATAATTGAAATGTATTGTTTGTTGATATTACTCTGGGAGTATGTCATTTCCTTGGAACACGGATTTTTCCTGAAATTGTGGTTGCCATATCGGATTGGAGCACAATTTCATGGGGCTTCAACTCTTGGGCATTTTGCTAGAATGGATGAAGTTTCTCTCAACAGTGAGCCAGTAGCAGATGATGATGCTGATGGATTTGAGATTGAAGGGGACTGTGGAATGGCAGATTTTGTCAGTCAAACTGGCATAATCCAAGGAGAGAACCCTCTTCCTCCTGCTGTTGGAATGGAATTTGAGACTTATGAGGATGTATATTATTTCTACAATTGTTATGCCAAGGATCAAGGATTTGGGGTTAGAGTAAGTAATACCTGGTATAGAAAGAGTAAGGAACGATACAGAGGAAAACTCAGCTGCAGTAGTGCTGGATTCAAGAAAAAAAGTGAAGCAAATCGCCCAAGACCTGAAACAAGAACTGGTTGCCCAGCAATGATAAAGTTCAGGTTGATGGATTCCAAAAGATGGAGAATTATAGAAGTTGAGCTTGAGCATAATCACTTGATTATCCCAACAAGTGGAAAGTTTTACAAATCCCATAAGCACCTTGGTTCGGGGAGCAAAAGAACATTGCAATTAGGTAGTACTGAAGAAGTTCAGAAAATTAGACTCTTTCGAACGGTAGTAATTGATGCTGAGGCCAATGGAAGTGTAGATATTGATGAAGAAGAACCCAAAAGCAAAGCTGTCTACTCCAATCAATTGAAGCTAAAGAAAGAAAAACTGGGGGGTTTGCTAGAATATGAAGCAGTGAAAGCAGCATTGAATAGAGCAGCTTTGCAAAGAAAATGGCAGCATGAGGCCTTGGCAGATTTGGACTCCAAAAATTCAAGCTTTATGCAGAAACCAAGGTGTTACTTTGAGTTGCAGGTTTCCAAATTATACACAAATGAACTATTGAGACTGTTTGAAAAGGAAGTGGAAGGAATGTACTCCGGTTTAAGCACCAGACAGATAAATGTGGATGGCCCAGTAATCTCATACATCATCAAGGAACAAGTTGAAGTTGAAGGAAATCAGAGAGTAACAAGAGATTACGAGGTGCATTACAATGGATCTGAAATGGAGGTCCTTTGCATTTGTGGTTTGTTCAACTTCAGAGGTTACTTGTGTAGGCATGCACTATCTATCTTACATCAAAATGGCATAGAAGAGATCACACCTCAATACATTCTTTCAAGATGGAGAAAAGATATGAAGCGCAGTTATGTTATTGATCACAAATGTAGTGGCATTGATATTAATAACCCAGTTCATAGGATGAAGTTCAAGGCTTTTCTCACGGAGAATGGAGTGAGTCTCTTGGAGAAGAGGTTCTTGCCAGCACTGGACAAGATGGGAAAGACATGCCACCTCTACCTCACAAGAGACCATGCCATGTTCCTGCACAACCTCCTCAATGGCGATGGTATTCAGTCCATTGCCCAATTTCGCAAAGAAGCCCTTTTTGATGACTACCGCATCTCCAGCCAGAACGAAGATCGCATTGCTTTTGCCATAGATATCACTCTTCTCCAACGTGCTGTTCGTAGCAGCGTGAGCATTTGTTCTGAACTTGGTGGTGGTGGGGCTACTACTAATCGTCTACAGATTAAGTTGGTGAAAAAGCTACCTCCAAATTGTACCCAACCTATGCCTTTTCTTACCTTTGAAACCAAGGGTTATAAATCTGCTGTTATTCAGGATATCCCAATTTCAAAGCCTATGTCAAGAGCTCAAGTTCTTGAACTTCAGAGTGCTTTGGATATGGCCCAAGACCTGCCTCAAACCCTAGTTCAGGTGCCAGATTTGAACCAATTACAGAACTTTGTGGATAGGATGAAGCAGGTGGGTGACGTGCTCAGTGTCTCCATAAGCAAGTATGGGGATTTACACATACAGCTTTCAACAACATTGATCACTCTTGGTGCTGAGTTTCGGAAATTGCTGGTTATTGGGGAGCAAGCGAATGCCCCTGCTGAAGATCAAAATCTGAGTGCTCAGACTCGGTCATCAAGGTCAATTTCGAGAGGAGACGCTCAATCTGTGCAAGTGAGTGTGAAGCACTTTGCCAAGAGCCTCCAGTGTCACTTGGCCAAACCAGATTGTGCTTTCTATGGAATTGCTCCACAGGGTGCTTGTTTGACAGTTATATTTCAGTTTTTCATCCCTGGTTCTCATCAGACTGATAAATCAATTAGCTTGCATTGCAGGCTTCCTGTACTTGACCCTGGTACTAGTTGA 2523 0.4185 MSIAAGHGCSYRCKIHPTLRGIKVDSSNVGFGWSRIRLVGIDSMKELTLLSSLIMHLREALDPILPNPEXGEKVGLGDKVAIIEMYCLLILLWEYVISLEHGFFLKLWLPYRIGAQFHGASTLGHFARMDEVSLNSEPVADDDADGFEIEGDCGMADFVSQTGIIQGENPLPPAVGMEFETYEDVYYFYNCYAKDQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKFRLMDSKRWRIIEVELEHNHLIIPTSGKFYKSHKHLGSGSKRTLQLGSTEEVQKIRLFRTVVIDAEANGSVDIDEEEPKSKAVYSNQLKLKKEKLGGLLEYEAVKAALNRAALQRKWQHEALADLDSKNSSFMQKPRCYFELQVSKLYTNELLRLFEKEVEGMYSGLSTRQINVDGPVISYIIKEQVEVEGNQRVTRDYEVHYNGSEMEVLCICGLFNFRGYLCRHALSILHQNGIEEITPQYILSRWRKDMKRSYVIDHKCSGIDINNPVHRMKFKAFLTENGVSLLEKRFLPALDKMGKTCHLYLTRDHAMFLHNLLNGDGIQSIAQFRKEALFDDYRISSQNEDRIAFAIDITLLQRAVRSSVSICSELGGGGATTNRLQIKLVKKLPPNCTQPMPFLTFETKGYKSAVIQDIPISKPMSRAQVLELQSALDMAQDLPQTLVQVPDLNQLQNFVDRMKQVGDVLSVSISKYGDLHIQLSTTLITLGAEFRKLLVIGEQANAPAEDQNLSAQTRSSRSISRGDAQSVQVSVKHFAKSLQCHLAKPDCAFYGIAPQGACLTVIFQFFIPGSHQTDKSISLHCRLPVLDPGTS 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1791 840 SMART 26again6 457 484 IPR006564 GO:0008270
Dere11g1791 840 PANTHER MITOTIC AND DNA DAMAGE CHECKPOINT PROTEIN HUS1 521 821 - -
Dere11g1791 840 Gene3D - 520 819 - -
Dere11g1791 840 FunFam Checkpoint protein 521 819 - -
Dere11g1791 840 ProSiteProfiles Zinc finger SWIM-type profile. 446 482 IPR007527 GO:0008270
Dere11g1791 840 Pfam FAR1 DNA-binding domain 188 270 IPR004330 -
Dere11g1791 840 Pfam Hus1-like protein 521 818 IPR007150 GO:0000077|GO:0030896
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1791 Dere-ChrDere11 31784205 31792542 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dere11g1791 Hus1 1.4e-73 CL0060