Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1786 ATGGCCATTACGTCTCTCGCTTTCCCTTCTCTGTTCCAACCCTCCACTTCTATTTCTTCTTCTTACTTCCTTGGTGGGGTCGATCTCCGTTCCCACAAAAGCTTCATCTCTATCCATTCGCCTTCTTCGACGTTAAGTACGAAGATCTCTTCTAGGCGCTTGCGAATAGTGGCTGTTGCTTCTGGCGACTATTATGCTACTCTTGGAGTCCCCAAATCCGCGACAAGCAAGGAAATTAAAGCGGCTTATCGAAGGTTAGCTCGCCAGTACCATCCTGATGTGAACAAGGAGCCTGGAGCAACTGAGAAATTCAAGGAGATAAGTGCTGCATATGAGGTGCTATCAGATGATAAAAAGAGGGCTTTATATGATCAATATGGAGAGGCTGGTGTTAAGAGCACAGTTGGAGGAGCATCAAATGCTTATACGACTAATCCATTTGATTTATTTGAGACATTTTTTGGGCCAAGTATGGGTGGCTTTCCTGGCATGGATCCAACCGGATTTGGAACACGTCGCCGCAGTACTGTTACCAAAGGTGAAGATATACGTTATGACATCTCCTTGGAATTTTCTGAGGTTATTTTTGGAGCGGAGAAAGAATTTGAGCTTTCCCATTTGGAAACATGTGAAGTCTGTATTGGTACTGGAGCAAAGATGGGTTCCAAGATGAGAATATGTTCAACTTGTGGTGGTAGGGGTCAGGTGATGAGGACTGAGCAAACACCTTTTGGAATGTTCTCACAGGTTTCAATATGTCCAAAATGTGGAGGGAATGGTGAAGTCATATCTGAATATTGCGGTAAATGCAGCGGGAAAGGACGTCTGCAAGTTAAGAAAAAAATTAAAGTTAAAATTCCTCCTGGGGTTAGCTCAGGCAGTATATTGAGAGTTGCTGGGGAGGGTGATGCTGGACCAAGAGGGGGCCCTCCAGGAGATCTTTATGTATATCTTGATGTGGAAGAAATACCTGGAATTGAAAGAGATGGCATTAATCTCTGCTCAACAATCTCAATCGGTTACCTAGATGCCATACTAGGGGCCACTGTAAAGGTAAAGACAGTTGAAGGCATATCTGAACTACAAATACCTCCCGGTACTCAGCCTGGAGATGTCCTTGTCCTTGCAAGGAAAGGTGCACCAAAATTAAATAAACCATCAATACGTGGTGATCATTTATTTACAGTTAAAGTTACAATACCTAAACGTATCAGTACAAAGGAACGTGAGCTGCTCGAAGAACTTGCTTTGCTAGGCCAAAACACCACAAGCAACCGGTCAAAACGCCGTCCTAGAACTCAATCTTCTACAGGAAGCACTGAAGGTCCAGCATCTGAAATTGCTGAAAGTCCAGCAGCAACGGTTGCAGAAAAAACAGAACAATTGGAAGATCAAAATGATATATGGAAGAAGTTAACAGACTTTGTTAGGCCTGTCGCAAATGGAGCTTTAAAGTGGATAAAAGATAATCTCTAG 1476 0.4329 MAITSLAFPSLFQPSTSISSSYFLGGVDLRSHKSFISIHSPSSTLSTKISSRRLRIVAVASGDYYATLGVPKSATSKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAGVKSTVGGASNAYTTNPFDLFETFFGPSMGGFPGMDPTGFGTRRRSTVTKGEDIRYDISLEFSEVIFGAEKEFELSHLETCEVCIGTGAKMGSKMRICSTCGGRGQVMRTEQTPFGMFSQVSICPKCGGNGEVISEYCGKCSGKGRLQVKKKIKVKIPPGVSSGSILRVAGEGDAGPRGGPPGDLYVYLDVEEIPGIERDGINLCSTISIGYLDAILGATVKVKTVEGISELQIPPGTQPGDVLVLARKGAPKLNKPSIRGDHLFTVKVTIPKRISTKERELLEELALLGQNTTSNRSKRRPRTQSSTGSTEGPASEIAESPAATVAEKTEQLEDQNDIWKKLTDFVRPVANGALKWIKDNL 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1786 491 SUPERFAMILY HSP40/DnaJ peptide-binding domain 178 321 IPR008971 GO:0006457|GO:0051082
Dere11g1786 491 Pfam DnaJ domain 63 124 IPR001623 -
Dere11g1786 491 CDD DnaJ_C 181 404 - -
Dere11g1786 491 Gene3D DnaJ domain 60 163 IPR036869 -
Dere11g1786 491 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 39 426 - -
Dere11g1786 491 FunFam Chaperone protein dnaJ A6 chloroplastic 210 274 - -
Dere11g1786 491 Pfam DnaJ C terminal domain 183 401 IPR002939 -
Dere11g1786 491 NCBIfam molecular chaperone DnaJ 63 416 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Dere11g1786 491 Gene3D - 210 274 - -
Dere11g1786 491 FunFam Putative Mitochondrial DnaJ chaperone 271 316 - -
Dere11g1786 491 MobiDBLite consensus disorder prediction 422 462 - -
Dere11g1786 491 SUPERFAMILY Chaperone J-domain 60 169 IPR036869 -
Dere11g1786 491 Pfam DnaJ central domain 210 274 IPR001305 GO:0031072|GO:0051082
Dere11g1786 491 Gene3D - 326 417 - -
Dere11g1786 491 Gene3D - 180 316 - -
Dere11g1786 491 ProSiteProfiles Zinc finger CR-type profile. 197 279 IPR001305 GO:0031072|GO:0051082
Dere11g1786 491 FunFam Molecular chaperone Hsp40/DnaJ family protein 326 418 - -
Dere11g1786 491 SMART dnaj_3 62 119 IPR001623 -
Dere11g1786 491 CDD DnaJ 63 116 IPR001623 -
Dere11g1786 491 MobiDBLite consensus disorder prediction 422 444 - -
Dere11g1786 491 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 197 276 IPR036410 -
Dere11g1786 491 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
Dere11g1786 491 SUPERFAMILY HSP40/DnaJ peptide-binding domain 327 412 IPR008971 GO:0006457|GO:0051082
Dere11g1786 491 FunFam Chaperone protein dnaJ A6 chloroplastic 60 166 - -
Dere11g1786 491 Hamap Chaperone protein DnaJ [dnaJ]. 60 475 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Dere11g1786 491 ProSiteProfiles dnaJ domain profile. 63 127 IPR001623 -
Dere11g1786 491 PRINTS DnaJ domain signature 119 138 IPR001623 -
Dere11g1786 491 PRINTS DnaJ domain signature 99 119 IPR001623 -
Dere11g1786 491 PRINTS DnaJ domain signature 65 83 IPR001623 -
Dere11g1786 491 PRINTS DnaJ domain signature 83 98 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1786 Dere-ChrDere11 31745416 31754362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1786 64 170 C2H2 Transcription Factor Family AT1G74250 37.815 5.98e-11 62.8