Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1772 ATGGGCTTATTCAGATGTGGAACCTTGCTTTTCTATGCGTTCTTCTTTCTGCTGAGAGTGTGTCTGGCAAATGATCAACACATCCCCCAGATATATCCCGGCTTCAAGGCATCTCAGCTTGATTGGAATGACCATGGTGGATTCTTCTTACTATCTAACAGCTCAGTTTTCGCTTTCGGATTCTTCCATACCCTCGACGTTTCCTTATTTGTTTTAGTTGTCATTCACTTGAAAAGCTACAAAGTGGTCTGGACTGCTAACAGAGGCTTACTAATAAGAAACTCTGATAAATTTGTGTTTGACAATACTGGGAATGCATATTTGGAAGGTGAGGGTGGTGTGGTTTGGGCAACAAACACATCGGGATCGGAAGTCAGAGCCATGGAATTGCAGGATTCAGGCAATTTGGTATTGATTGGGGAAGAACGAAGAGTTATTTGGCAGAGTTTTAGCCATCCCACTGATACCCTTTTACTTAATCAAGTTTTTGTAGAAGGAATGAGTCTCAAAAGCTTCCCTGACCGTAATAATTTGTGTCATTATCTTACCCTTATGTCAGGTGATATGGTTCTCTATGCAGGATATAAAACTCCACAGATATATTGGTCCTTAAGAAGCACGAACAATGTCAGTAAGAAGGTTTATTCTGCTTCTTTGGTTTCAAATTCATGGAATTTCTATGACAATGGTGGAGCTTTACAATGGAAATCTGTCTTCTCTGAGAAATCTGATCCCAAAGCCATGTGGGCTGCTATATTAGAACCTAATGGTGTAATCACTTTCTATGATCTTAACAAGGGAAAATCTGTTAACGCCGAGGCAATTAGAATACCAGAAGACCCTTGTGGCGTCCCTGAGCCTTGTGATCCTTATTATGTTTGCTTCTTTGACAGCTGGTGCATATGCCCTCAACTTCTCAAATCCCGTTTCAATTGCAAGCCTCCAAACGTCACATCATGTTCTAGAACCCAAGAAGAACTTCTATATGTTGGCGAAGAGCTAGATTATTTTGCAGTCAAGTATGTTCAACCAGTTTCTAAATCAACCCTGAATGCTTGCAAAGAAGGTTGCTTAAGAAACTGCTCTTGCCTTGTGCTTTTCTTTGAGAACAGTACAGGGAAGTGCTTTCATTTTGATCAGACAGGGAGTTTCCAACGTTCTAAACCGAGTTCTGGAGGTTACGTATCATACATGAAAGTCTCTATTGAAGGAAATGGAGATGGAAGAAAACGAAAGAATGAAACTCTACTAATTGTTGCCGCAGTAATTTTCCCAATTCTGATTATTGTTGGACTTGTATGGGGATTCTGGCTCTACAACAAAAAGAACCATTTAGAGTATTCTTCAGATACATTGGAGGATACAAATTTCATGGATAATCTTTCTGGTATGCCAGCCCGCTTTAGTTATAATACTCTAAGTAAAGCCACTGAGAATTTCTCAACAAAAATTGGTGAAGGAGGTTTTGGCTCAGTTTATCTAGGTGTGCTTCAAGATGGAACCCAATTGGCTGTGAAAAAATTGGAAGGAATAGGACAAGGGACAAAAGAATTTAGAGCTGAAGTATCCAGCATTGGAAGTATTCACCATGTACATTTGGTGAAGCTGAAGGGCTTCTGCGCTGAAGGCCCTCATCGCCTACTTGTATATGAGTACATGGCAAGAGGTTCTCTGAACAAATGGATCTTTAAAAACCATGAAAATAGTTTCTTGCTGAATTGGAATACAAGATTCAACATTGCATTAGGTACAGCAAAGGGATTGGCCTATCTTCATGAGGAGTGTGAGGTGAAGATCATACACTGTGATATCAAACCAGAGAATGTCCTTCTTGATGATAACTTTGTAGCTAAAGTTTCAGACTTCGGATTGGCTAAGCTAATGAGCCGGGAACAGAGCCATGTCTTCACAACACTAAGAGGAACAAGAGGGTATCTAGCACCAGAATGGATCACCAACTACGCAATTTCAGAAAAGAGTGATGTGTACAGCTATGGGATGGTTCTGCTTGAGATTATTGGAGGAAGGAGGAATTATGATCAATGGGAAGGCTCAGAGAAAGCTCATTTTCCTTCTTATGCCTTCAGGAAGATGGAAGAAGGAAAACTGAAGCAAGTTCTTGACCCAAGTATAGACATCGATGAGAATGATGAAAGAGCTGTCACTGCCATCAAGGTTGCTCTATGGTGTATACAAGATGACATGAGTTTGAGGCCTCCCATGACAAAGGTTGTTCAAATGCTTGAAGGTGTTTGCCCTGTACCTGATCCCCCATCATCATCTACATTCAGTTCCTATTCAGCGTTCCTGAAAATGAACAGTGAAGAAGCTTCTTCATCGAAACAGGCTAGTTTTTACAGTAATGTACCCCTATCTTGTGTTCAGTTATCAGGGCCTAGATGA 2403 0.407 MGLFRCGTLLFYAFFFLLRVCLANDQHIPQIYPGFKASQLDWNDHGGFFLLSNSSVFAFGFFHTLDVSLFVLVVIHLKSYKVVWTANRGLLIRNSDKFVFDNTGNAYLEGEGGVVWATNTSGSEVRAMELQDSGNLVLIGEERRVIWQSFSHPTDTLLLNQVFVEGMSLKSFPDRNNLCHYLTLMSGDMVLYAGYKTPQIYWSLRSTNNVSKKVYSASLVSNSWNFYDNGGALQWKSVFSEKSDPKAMWAAILEPNGVITFYDLNKGKSVNAEAIRIPEDPCGVPEPCDPYYVCFFDSWCICPQLLKSRFNCKPPNVTSCSRTQEELLYVGEELDYFAVKYVQPVSKSTLNACKEGCLRNCSCLVLFFENSTGKCFHFDQTGSFQRSKPSSGGYVSYMKVSIEGNGDGRKRKNETLLIVAAVIFPILIIVGLVWGFWLYNKKNHLEYSSDTLEDTNFMDNLSGMPARFSYNTLSKATENFSTKIGEGGFGSVYLGVLQDGTQLAVKKLEGIGQGTKEFRAEVSSIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLNKWIFKNHENSFLLNWNTRFNIALGTAKGLAYLHEECEVKIIHCDIKPENVLLDDNFVAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRRNYDQWEGSEKAHFPSYAFRKMEEGKLKQVLDPSIDIDENDERAVTAIKVALWCIQDDMSLRPPMTKVVQMLEGVCPVPDPPSSSTFSSYSAFLKMNSEEASSSKQASFYSNVPLSCVQLSGPR 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1772 800 Gene3D Phosphorylase Kinase; domain 1 442 552 - -
Dere11g1772 800 CDD PAN_AP_plant 345 401 - -
Dere11g1772 800 ProSiteProfiles PAN/Apple domain profile. 320 401 IPR003609 -
Dere11g1772 800 FunFam serine/threonine-protein kinase PBS1-like 446 552 - -
Dere11g1772 800 SMART serkin_6 478 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1772 800 ProSitePatterns Protein kinases ATP-binding region signature. 484 507 IPR017441 GO:0005524
Dere11g1772 800 PIRSF SRK 3 797 IPR024171 GO:0004674
Dere11g1772 800 ProSiteProfiles Bulb-type lectin domain profile. 35 151 IPR001480 -
Dere11g1772 800 SMART blect_4 41 153 IPR001480 -
Dere11g1772 800 Pfam D-mannose binding lectin 82 160 IPR001480 -
Dere11g1772 800 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 42 759 - -
Dere11g1772 800 FunFam S-receptor-like kinase 5 553 757 - -
Dere11g1772 800 Pfam Protein kinase domain 481 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1772 800 SUPERFAMILY Protein kinase-like (PK-like) 457 749 IPR011009 -
Dere11g1772 800 Gene3D Transferase(Phosphotransferase) domain 1 553 752 - -
Dere11g1772 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Dere11g1772 800 CDD STKc_IRAK 484 750 - -
Dere11g1772 800 Gene3D - 44 152 IPR036426 -
Dere11g1772 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 204 IPR036426 -
Dere11g1772 800 CDD B_lectin 46 153 IPR001480 -
Dere11g1772 800 ProSiteProfiles Protein kinase domain profile. 478 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1772 Dere-ChrDere11 31602087 31604489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1772 413 760 Receptor kinase-like Gene Family AT5G20050 44.355 4.50e-94 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dere11g1772 Pkinase 4.4e-50 CL0016