Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1703 ATGAATTCGAAATTCCGGCTACTCCGACCTGGCTTTTCCTTCTCCTTCACCGTTCTCCCTGCCGCTAGCCGCAATCTTTTTCTTCTTTGTCATTATCATCTTCCTGGTCTTGGGAACCCAATTTGCTGGGGGAGTGTTTGTGCGCACTGTTCTGCTGCATTCTCTCAGCGACGCATGGGAAATGTTCGACAATTTGATCAAGAAAGAAATCAGAGTAATTTTGCAGAACAAATGGGGCTGAACTCCAATAGAGTGGAGCACTTTGATTGCCATGAACGTGAAACCACTATCAGAATCCAAAGCGAGATACCGGTAGCAACAGCATTGGAAATCCACAGAGTTCGTTTGCCACCAGAGCAAACCACACTGCAGAAACTAAGGCACAGGGTCTCTGAGATATTCTTCCCTGACGATCCACTCTACAGATTCAAGAACCAGACTTGGTTCAGGAAATTGCTTCTGAGTCTTCAATATCTCTTCCCCATTTTCCAGTGGGGGCCTGAGTACAATCTCAGGTTTCTTCGTTCCGATATCATCTCTGGCCTCACCATTGCTAGCTTGGCCATTCCTCAGGGAATCAGCTACGCAAAGCTTGCAAATCTGCCACCCATAATTGGACTATATTCCAGCTTTGTGCCCCCCTTGATATATTCCCTGCTTGGGAGTTCTAGACATCTTGGCGTTGGCCCTGTTTCAATTGCATCCTTGGTTATGGGATCTATGTTAAGCGAGACGGTTTCTTACACACAAGATCCAATTCTGTATCTGAAATTAGCTCTCACTGCCACTTTCTTTGCTGGTGTATTCCAATCATCTCTGGGTATATTAAGATTAGGAGTTATAATTGATTTCCTCTCAAAAGCGACACTTGTTGGTTTCATGGCCGGTGCAGCGATCATTGTGTCACTGCAGCAGCTTAAAGGGATACTAGGAATAGTGCACTTCACTAATGAGATGCAAATAATTCCTGTAATGACCTCTGTATTCAAGCAGAGAAACGAGTGGTCATGGCAAACCATTATACTGGGATTCGGCTTCCTGGCCTTCCTGCTGGCAACAAGGCACATTAGCTTGAAGAGACCAAAACTATTCTGGGTTTCAGCAGCAGCCCCATTGACATCAGTTATTCTGTCAACTCTTTTGGTCTTCTGTCTCAGAAATAAGGCTCATGGAATTGCAATCATCGGCCACTTGCCAAAGGGCATTAATCCGCCATCACCAAACATGTTATACTTCGATGGTCCATATTTGGCACTAGCAATCAAAACCGGCATCGTTACTGGGATATTGTCTCTCACTGAAGGAATTGCAGTTGGAAGAACATTTGCTACACTTAAGAACTACCAAGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTCATGAACATAGCTGGCTCTTGTTCTTCATGTTATGTCACAACAGGATCTTTTTCTCGATCCGCCGTTAATTACAATGCTGGAGCCCAGACAACAGTTTCGAACATAGTAATGGCAGCAGCTGTTCTTGTGACCCTTCTGTTTCTTATGCCGCTGTTTTATTACACACCAAATGTTGTCTTAGCAGCCATTATCATCACTGCTGTGATTGGGCTAATAGATTACCAAGCTCCATATAAATTGTGGAAGGTTGACAAGATCGACTTCTTGGCTTGTTTGTGCTCCTTTTGTGGGGTTGTGTTCATCTCAGTACCTCTAGGCCTTGGTATAGCGGTGGGAATATCAGTCTTCAAGATTCTACTTCATGTGTCTCGGCCAAACACTGTGGTTTTGGGGAACATACCAGGAACACAAATATACCACAACATAAACCAATACAGAGAAGCTTCAAGGGTTCCTTCATTTCTCATTCTAGCTGTTGAGTCACCCATTTACTTCGCCAATTCAAGTTACCTACAAGAAAGAATACTGAGATGGGTACGAGAAGAGGAAGAGCGTATAAAGGCAAACAAAGAAAGTACATTGAAGTGCATAATTTTAGACATGTCAGCTGTGACTGCCATAGACACAAGTGGGATTGACACTCTTTGTGAACTTAGAAAGATGCTGGAGAAAAGATCACTTCAGCTCGTGCTGGCAAATCCAGTTGGAAATGTGATGGAAAAGTTACATCGGTCAAAAGTTTTGGACTCCTTTGAGGTGAAAGGACTCTATCTCACAGTTGGAGAAGCTGTCGCTGACAATTCAATTCCCTGA 2196 0.4381 MNSKFRLLRPGFSFSFTVLPAASRNLFLLCHYHLPGLGNPICWGSVCAHCSAAFSQRRMGNVRQFDQERNQSNFAEQMGLNSNRVEHFDCHERETTIRIQSEIPVATALEIHRVRLPPEQTTLQKLRHRVSEIFFPDDPLYRFKNQTWFRKLLLSLQYLFPIFQWGPEYNLRFLRSDIISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSETVSYTQDPILYLKLALTATFFAGVFQSSLGILRLGVIIDFLSKATLVGFMAGAAIIVSLQQLKGILGIVHFTNEMQIIPVMTSVFKQRNEWSWQTIILGFGFLAFLLATRHISLKRPKLFWVSAAAPLTSVILSTLLVFCLRNKAHGIAIIGHLPKGINPPSPNMLYFDGPYLALAIKTGIVTGILSLTEGIAVGRTFATLKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTTVSNIVMAAAVLVTLLFLMPLFYYTPNVVLAAIIITAVIGLIDYQAPYKLWKVDKIDFLACLCSFCGVVFISVPLGLGIAVGISVFKILLHVSRPNTVVLGNIPGTQIYHNINQYREASRVPSFLILAVESPIYFANSSYLQERILRWVREEEERIKANKESTLKCIILDMSAVTAIDTSGIDTLCELRKMLEKRSLQLVLANPVGNVMEKLHRSKVLDSFEVKGLYLTVGEAVADNSIP 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1703 731 NCBIfam sulfate permease 161 724 IPR001902 GO:0016020|GO:0055085
Dere11g1703 731 SUPERFAMILY SpoIIaa-like 609 725 IPR036513 -
Dere11g1703 731 Gene3D STAS domain 585 728 IPR036513 -
Dere11g1703 731 ProSiteProfiles STAS domain profile. 605 728 IPR002645 -
Dere11g1703 731 CDD STAS_SulP_like_sulfate_transporter 606 721 - -
Dere11g1703 731 ProSitePatterns SLC26A transporters signature. 203 224 IPR018045 GO:0008271|GO:0008272
Dere11g1703 731 PANTHER SULFATE TRANSPORTER 123 726 IPR001902 GO:0016020|GO:0055085
Dere11g1703 731 FunFam Sulfate transporter 31 585 730 - -
Dere11g1703 731 Pfam Sulfate permease family 174 553 IPR011547 GO:0016020
Dere11g1703 731 Pfam STAS domain 606 724 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1703 Dere-ChrDere11 30698735 30703628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1703 78 729 Inorganic Solute Cotransporters AT3G15990 74.540 0.0 1017