Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1700 ATGGATGACACTGAGGATGATCCAAAGTATGTTCCTAACCCATATGGTGTAAGTCATCACCAAAGTTATGGTTATTTGCATAGTCAGAAACTTCCAACTGGGAGTTCTCAGCATTCTCAGCCAGTTATGAATGAATATGCTGAAGATGACAATGATTACGAGGAAGAAGATGATGGACAGGAAGACGACGATGATGATGTTGATCATGGTAACAATATTCATATTTCCCAAAAAGAAATTGATGATGATGATGATAATGATGAAGATGATGAAAATGGGGATGGGAATGATAGTGATAATGACAGCAATGATGATGATAATAATAATAATGACAAGCAGAAAAGTTACACCATAAGGGTTGAAGATGATTTAGAATCACACCCAAAAAAGCGAAAACTTAAGAGTTTGATTTCAACTTATGAATTTGCTCCTCGTGTACCTGCACCACCAGTAGCAGCCCCTTCTGCCCCTAAACCATCATTTGGCGGGAGGAATTCCCTTACTGACTGGACTGAGAACGAGACATTTGTTCTTCTTGATGCTTGGGGTGACCGGTTTATTCAACGTGGAAGGAAGAGTCTCCGGTCTGAGGAATGGCAAGAAGTTGCAGAAAGGGTAAAAGAAGTTTCAAAAATTGAAAGGACAGATACTCAGTGTAGGAACCGTCTTGATACATTAAAGAAAAAGTACAAAAAGGAGAAGACAAAATTAGCAGAAATGGGGGGTGGACCTAGCAAATGGGTTTATTTTAATAGGATGGATAAGCTGATGTCTTCGCCACCGCAACAAGCAGGCCTATCTTGTGGTTTGGACTCAGGAGAGTATGTATTTACCAATCCTAGAGTTTATTTAAGCAGTGCAAATGGCTTTGATGAAATGAGGGATAGTCCAGGGAATTCGGAGTCTACTGGTGAAGAAGGTTCAGATGGACTTCAACAAAAGAAAAGGTCTAAAGGGAACAATGATGAAACTTCCTCCTTCAAATTGCTTGCTGATTCCATTCAAAAATTCAGTGAGATATATGAGAAGATTGAAAATAATAAAAGGCAGCAGATGGTGGAACTGGAGAAGATGAGGATGGATTTCCATAAAGAATTAGAAATGCAGAAGAGGCAGATTTTTGAGAAAGTACAGAGTGAGATTGTGAAGCTGCAGCAGAGAGATGAGGAGGAGAATGATGAGTCTGCTGAGAACGGTATGTGA 1203 0.3973 MDDTEDDPKYVPNPYGVSHHQSYGYLHSQKLPTGSSQHSQPVMNEYAEDDNDYEEEDDGQEDDDDDVDHGNNIHISQKEIDDDDDNDEDDENGDGNDSDNDSNDDDNNNNDKQKSYTIRVEDDLESHPKKRKLKSLISTYEFAPRVPAPPVAAPSAPKPSFGGRNSLTDWTENETFVLLDAWGDRFIQRGRKSLRSEEWQEVAERVKEVSKIERTDTQCRNRLDTLKKKYKKEKTKLAEMGGGPSKWVYFNRMDKLMSSPPQQAGLSCGLDSGEYVFTNPRVYLSSANGFDEMRDSPGNSESTGEEGSDGLQQKKRSKGNNDETSSFKLLADSIQKFSEIYEKIENNKRQQMVELEKMRMDFHKELEMQKRQIFEKVQSEIVKLQQRDEEENDESAENGM 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1700 400 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 155 391 IPR044823 -
Dere11g1700 400 MobiDBLite consensus disorder prediction 105 131 - -
Dere11g1700 400 MobiDBLite consensus disorder prediction 292 307 - -
Dere11g1700 400 Coils Coil 341 372 - -
Dere11g1700 400 MobiDBLite consensus disorder prediction 22 44 - -
Dere11g1700 400 MobiDBLite consensus disorder prediction 146 167 - -
Dere11g1700 400 Pfam Myb/SANT-like DNA-binding domain 169 256 IPR044822 -
Dere11g1700 400 MobiDBLite consensus disorder prediction 288 328 - -
Dere11g1700 400 MobiDBLite consensus disorder prediction 308 322 - -
Dere11g1700 400 MobiDBLite consensus disorder prediction 81 104 - -
Dere11g1700 400 Coils Coil 374 394 - -
Dere11g1700 400 FunFam trihelix transcription factor ASIL2 170 232 - -
Dere11g1700 400 ProSiteProfiles Myb-like domain profile. 170 227 IPR001005 -
Dere11g1700 400 MobiDBLite consensus disorder prediction 47 66 - -
Dere11g1700 400 Gene3D - 170 232 - -
Dere11g1700 400 MobiDBLite consensus disorder prediction 1 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1700 Dere-ChrDere11 30685098 30686300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1700 327 386 Trihelix Transcription Factor Family AT3G14180 51.667 6.92e-12 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Dere11g1700 Myb_DNA-bind_4 3.1e-22 CL0123