Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1698 ATGAGCGTGGTTGGTTTTGATTTTGGTAATGAGAGCTGTATTGTTGCTGTTGCAAGGCAGAGGGGAATTGATGTTGTGCTCAATGATGAGTCCAAGCGAGAAACTCCTGCAGTTGTTTGCTTTGGTGACAAACAACGGTTTATTGGAACAGCTGGGGCTGCATCTATGATGATGAACCCCAAAAATTCGATCTCACAGATTAAGCGACTAATTGGTAGACAATTCTCTGATCCAGAATTTCAGCGGGATCTGACGTCGTTGCCATTTGTTGTTTCCGAAGGGCCTGATGGCTATCCATTAATTCATGCACGGTATTTGGGTGAAACTAAAACATTTACACCTACACAAATGTTGGCAATGGTGTTGTCAAATCTCAAAGGCATAGCTGAGAAAAATCTGAATGCAGCTGTTTTTGATTGTTGCATTGGAATTCCGGTTTATTTTACTGATCTTCAGAGAAGGGCAGTCATGGATGCAGCTACCATTGCTGGTTTGCGCCCACTTCGCCTGATTCATGAAACAACTGCAACTGCCTTGGCTTACGGAATTTATAAGACAGATCTTCCTGAAAATGATCAACTGAATGTTGCCTTCGTTGACATTGGACATGCCAGCATGCAAGTGTGCATTGCTGGCTTTAAAAAAGGGCAGCTGAAAGTATTGGCCCATTCATTTGATAGATCTTTGGGTGGTAGGGATTTTGATGAAGTTATGTTCCAGCACTTTGCTACAAAGTTCAAGGAAGAGTACAAGATTGATGTTTTCCAGAATGCCAGGGCGTGTCTAAGGCTGCGAGCTGCTTGTGAAAAACTGAAGAAGGTGCTTAGTGCAAATCCTGAGGCACCTCTAAACATTGAGTGCTTAATGGATGAGAAGGATGTCAGAGGCTTCATCAAGCGTGATGAATTTGAGAAATTAAGTATTCCAATTTTGGAACGTGTGAAAAAACCTTTGGAGAAGGCCCTTGCAGAGGCAGGTCTTACGATTGAAAATGTCCATACGGTTGAAGTAATTGGTTCAGGTTCTCGTATACCAGCTATCAACAAGATATTGACAGAGTTTTTCAAGAAGGAGCCTAGGCGGACGATGAATGCAAGTGAGTGTGTTGCCAGGGGTTGTGCCTTGCAATGTGCAATTCTTAGTCCAACATTTAAAGTAAGAGAGTTTCAGGTCAACGAAAGCTATCCTTTCTCAATTTCTTTGTCATGGAAAGGTTCTGGTCCAGACGCACAGGATAGTGAACCAGATAACCAGATGAGTACTGTTGTTTTCTCCAAAGGAAATGTCATACCAAGCATCAAGGCTCTGACATTCTACAGGTCAGGAACATTCTCTGTTGATGTACAGTATTCTGATGTGAGCGAGCTGCAAATACCTCCAAAGATCAGCACATATGCTATTGGTCCTTTCCCAACTACAAAAGTTGAAAAGGGAAAAGTTAAAGTCAAAGTACGATTGAATCTGCATGGAATTGTAGCTGTTGAGTCGGCAATTCTTCTGGAGGAGGAAGAAATTGAGGTTCCAGTGTCCAAAGAACCAGCAGCGGAAAATATCAAGATGGACACTGATGATGCTTCTGCTGAGGCTGCTGCTGCACCTCCGAGCTCCAATGATGCTGATGTCCTTATGCAAGATGATAAGTCAACTGCAGACACCCCTGGAGTTGATAACGGCAATGCTGAGAGTGGAGATAAGCCTGTGCAAATGGATACTGATACCAAGGTTGAGGCTCCAAAGAAAAAGGTCAAGAAAACAAACATACCTGTGTCAGAGTTGGTATATGGAGCAATGGGTCATACAGATGTCCAGAAAGCTGTGGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGAGTGATGGAAGAAACAAAAGAAAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAGGAGTTTGTCACTGCTTCAGAGAGAGAGGAATTTACTGCTAAACTCCAGGAGGTGGAAGACTGGTTATATGAAGACGGTGAGGATGAAACTAAAGGTGTTTATGTTGCCAAACTTGAGGAACTTAAGAAGCAAGGTGACCCAATTGAAGAGCGTTACAAGGAATACATGGAGAGGGGCACGATAATTGATCAGTTCATCTACTGTATAAATAGTTATAGGGAAGCAGCAATGTCAAATGATCCCAAATTTGATCACATTGACATTTCTGAGAAGCATAAGGTCTTAAATGAATGTGTTGAAGCCGAGGCTTGGCTTAGGGAGAAGAAGCAGCAGCAGGACTCACTTCCAAAATATGCCACCCCTGTACTCTTGTCAGCTGAAGTAAGAAGGAAAGCTGAGGGAGTTGATAGGTTCTGTAAGCCGATTATGACAAAACCAAGGCCAGCCAAGCCAGCTACTCCCGAAACAACTTCAACCCCACCTCCTCAGGGTGGCGAGCAGCAGCAACCTCAGGGAGATGCTAATGTCAACACTAATGAGAACTCAGGCGACAGCACTAACCAGGTTCCGCCAGCATCTACTGAACCCATGGAGACTGACAAGTCAGAAAATTCAGGCACTGCATAA 2562 0.4333 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAVVCFGDKQRFIGTAGAASMMMNPKNSISQIKRLIGRQFSDPEFQRDLTSLPFVVSEGPDGYPLIHARYLGETKTFTPTQMLAMVLSNLKGIAEKNLNAAVFDCCIGIPVYFTDLQRRAVMDAATIAGLRPLRLIHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVMFQHFATKFKEEYKIDVFQNARACLRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRGFIKRDEFEKLSIPILERVKKPLEKALAEAGLTIENVHTVEVIGSGSRIPAINKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESYPFSISLSWKGSGPDAQDSEPDNQMSTVVFSKGNVIPSIKALTFYRSGTFSVDVQYSDVSELQIPPKISTYAIGPFPTTKVEKGKVKVKVRLNLHGIVAVESAILLEEEEIEVPVSKEPAAENIKMDTDDASAEAAAAPPSSNDADVLMQDDKSTADTPGVDNGNAESGDKPVQMDTDTKVEAPKKKVKKTNIPVSELVYGAMGHTDVQKAVEKEFEMALQDRVMEETKEKKNAVEAYVYDMRNKLNDKYQEFVTASEREEFTAKLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEYMERGTIIDQFIYCINSYREAAMSNDPKFDHIDISEKHKVLNECVEAEAWLREKKQQQDSLPKYATPVLLSAEVRRKAEGVDRFCKPIMTKPRPAKPATPETTSTPPPQGGEQQQPQGDANVNTNENSGDSTNQVPPASTEPMETDKSENSGTA 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1698 853 Gene3D - 597 706 IPR029048 -
Dere11g1698 853 FunFam Heat shock 70 kDa protein 14 387 595 - -
Dere11g1698 853 MobiDBLite consensus disorder prediction 523 571 - -
Dere11g1698 853 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 719 795 IPR029048 -
Dere11g1698 853 FunFam Heat shock 70 kDa protein 4 38 113 - -
Dere11g1698 853 MobiDBLite consensus disorder prediction 804 853 - -
Dere11g1698 853 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 598 697 IPR029048 -
Dere11g1698 853 CDD HSPA4_like_NDB 2 381 - -
Dere11g1698 853 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Dere11g1698 853 Coils Coil 683 703 - -
Dere11g1698 853 FunFam Heat shock 70 kDa protein 4 230 313 - -
Dere11g1698 853 MobiDBLite consensus disorder prediction 780 853 - -
Dere11g1698 853 PANTHER HSC70CB, ISOFORM G-RELATED 1 845 - -
Dere11g1698 853 Pfam Hsp70 protein 3 698 IPR013126 GO:0005524|GO:0140662
Dere11g1698 853 Gene3D Actin; Chain A, domain 4 230 313 - -
Dere11g1698 853 FunFam Heat shock 70 kDa protein 4 597 707 - -
Dere11g1698 853 Gene3D - 38 113 - -
Dere11g1698 853 FunFam Heat shock 70 kDa protein 4 108 206 - -
Dere11g1698 853 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 630 IPR029047 -
Dere11g1698 853 PRINTS 70kDa heat shock protein signature 363 383 - -
Dere11g1698 853 PRINTS 70kDa heat shock protein signature 30 42 - -
Dere11g1698 853 PRINTS 70kDa heat shock protein signature 140 160 - -
Dere11g1698 853 PRINTS 70kDa heat shock protein signature 332 348 - -
Dere11g1698 853 PRINTS 70kDa heat shock protein signature 2 15 - -
Dere11g1698 853 Gene3D - 186 360 - -
Dere11g1698 853 FunFam Heat shock 70 kDa protein 4 1 74 - -
Dere11g1698 853 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Dere11g1698 853 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 594 IPR029047 -
Dere11g1698 853 Gene3D - 5 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1698 Dere-ChrDere11 30677322 30682665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1698 4 406 Calmodulin-binding Proteins AT1G16030 36.946 2.68e-85 283