Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1678 ATGAGAAATATATCTCCTTCAGATTTGGATTATCCATGTTTTCGAAGGTGTAAATTTGAGAGGAAGAAAGTCATGACATGTGGTAATCAGTTAGTAACGCGAAGAACGAAAAAGGTTGATCATATGAGAGTAATGGATTTGTGGCAAGAGTTTCTTGGAAGTAGATGGAGTAGAGAATTTGTGGCGGGAGGCATTGGGGGTCTGGCTGGAGTAATCTCTGGTTATCCACTGGACACTCTCCGAATCCATCAACAGAATTCAAATATGGCAGGTTCTGCTATCAGCTTGATCAGAAATGTGGTGGCCAAGGAAGGACTAGCTGCTCTCTACAGAGGCATGGCTGCACCTTTGGCCTCTGTTACTTTTCAGAATGCTATGGTTTTCCAAACTTATGCAATTCTTTCAAGAGCATTTGACTTATCAGTTTCAGCAAACGACCCTCCTTCCTACAAGAGTGTAACTCTAGGGGGATTCATAACCGGTGTTCTACAAAGCACGATTGCCTCCCCTGTAGAATTGGTCAAAATTCGCCTCCAGCTACAGAGCAAAAGCCAATTTACAGAATCCTATAAAGGTCCTTTATCAGTCACTAAGAACATATGGAAAAGAGAAGGTCTTCGAGGCATATTTCGAGGATTGGGCATCACTATTCTCAGAGATGCACCTGGTCATGGACTCTACTTCTGGACATACGAATACATGAGGGAGCAACTTCACCCAGGTTGTAGAAAAAGTGGTCAAGAAAGCTTGTGTACAATGCTAACAGCAGGAGGATTAGCTGGGGTAGTGAGTTGGATTGGCTCCTACCCTTTCGATGTTATAAAGACAAGACTTCAGGCTCAAACACAATCTTCAATGAAATACAAAGGCATGCTTGATTGCCTCGAAAAGAGCATTAGAGAAGAAGGATATGATGTTTTATGGAGGGGTATAGGAACTACAGTTGGTAGAGCTTTTGTAGTGAATGGTGCTGTGTTTGCTGCTTATGAAATTGCTATGAGGAGCCTGTCAAATAATGGAAGTACTAACAATCAAGGAGAACCATCCTTTTCCAGGAAAACAAGACAATGA 1071 0.422 MRNISPSDLDYPCFRRCKFERKKVMTCGNQLVTRRTKKVDHMRVMDLWQEFLGSRWSREFVAGGIGGLAGVISGYPLDTLRIHQQNSNMAGSAISLIRNVVAKEGLAALYRGMAAPLASVTFQNAMVFQTYAILSRAFDLSVSANDPPSYKSVTLGGFITGVLQSTIASPVELVKIRLQLQSKSQFTESYKGPLSVTKNIWKREGLRGIFRGLGITILRDAPGHGLYFWTYEYMREQLHPGCRKSGQESLCTMLTAGGLAGVVSWIGSYPFDVIKTRLQAQTQSSMKYKGMLDCLEKSIREEGYDVLWRGIGTTVGRAFVVNGAVFAAYEIAMRSLSNNGSTNNQGEPSFSRKTRQ 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1678 356 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 54 336 - -
Dere11g1678 356 MobiDBLite consensus disorder prediction 337 356 - -
Dere11g1678 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 54 137 IPR018108 -
Dere11g1678 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 248 335 IPR018108 -
Dere11g1678 356 Gene3D Mitochondrial carrier domain 57 348 IPR023395 -
Dere11g1678 356 Pfam Mitochondrial carrier protein 154 238 IPR018108 -
Dere11g1678 356 Pfam Mitochondrial carrier protein 249 339 IPR018108 -
Dere11g1678 356 Pfam Mitochondrial carrier protein 56 138 IPR018108 -
Dere11g1678 356 PRINTS Mitochondrial carrier protein signature 210 228 IPR002067 GO:0055085
Dere11g1678 356 PRINTS Mitochondrial carrier protein signature 257 279 IPR002067 GO:0055085
Dere11g1678 356 PRINTS Mitochondrial carrier protein signature 59 72 IPR002067 GO:0055085
Dere11g1678 356 ProSiteProfiles Solute carrier (Solcar) repeat profile. 148 237 IPR018108 -
Dere11g1678 356 SUPERFAMILY Mitochondrial carrier 56 330 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1678 Dere-ChrDere11 30422215 30426419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1678 45 344 Antiporters AT1G79900 63.000 2.95e-132 378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1678 11 30422215 30426419 Dere11g1678 11 30422215 30426419 ECH