Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1675 ATGAACGGGGCAGGGAGACAGGGGCAGAGATCTGGTGCCACGGGGGTGCATCACCAGCGCCAGTACTCCGATAACTTCTTGGACAGCTCGTCCAATGGGAGGTGGCTTCAATCGGCTGGTCTCCAACACTTACAAACCTCCGGCAATCCTATTCCTCCGCTTCAGGACTATAACTTCTATGGAGGGGGAGAACAGGGAACCAGAATGCTTAGGAATGCGCAGAGGAGCTTCAATGGGATGAATGAATATTGTATGGAGCCCTCCACACCTCCAGGCAATTATCGGGCTTCCAGTCAGAAAAAGAATGGCGAAGATTCACCCGGTGATTTCAGCCCTGGGCTTTTGGATCTGCATTCATTTGATACGGAGCTTCTTCCTGAGATGCCGGTATCCAATATGTATAATGGTACTTCCATGTGTCAGCCTGTCCAGGGTAGAAGCTTTGATGACTCTGAACCTTACATTTCTGCCAAACTGACTGGTAGAGCTCGTGTTCCTGAAAACAATCTCCTCAAAAGTTTTTCTGCAGACAAAGAGAAATCTAGTTCTGTTGCAAAAATTAAAGTTGTGGTTCGCAAGAGGCCACTGAATAAGAAGGAATTAGCAAAGAATGAGGAAGATATAATAGAGACACATTCCAATTCTTTAACAGTACATGAGACTAAACTTAAGGTTGATCTAACTCAGTATGTAGAGAAGCATGAATTTGTTTTTGATGCTGTCTTGAATGAGGAGGTGACGAATGACGAGGTGTATCATGAAACAGTGGAGCCCATTGTTCCAATAATCTTTCAACGCACTAAGGCAACTTGCTTTGCATATGGACAAACAGGAAGTGGAAAGACCTATACAATGAAGCCACTGCCACTTAAAGCATCAAGGGACATCTTGAGATTGATGCACCACACTTACAGGAACCAGGGATTTCAGTTATTTGTGAGTTTCTTTGAAATATATGGCGGAAAGCTTTTTGATCTCCTTAGCGATCGAAAAAAGCTTTGCATGAGAGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAGTACAGAGTGTCCGATGTAGAGACCATCAAGGAACTGATTGAGAAAGGAAATTCCACAAGAAGCACAGGCATCACTGGTGCAAATGAGGAATCTTCACGGTCACATGCAATACTTCAGCTTGCCATCAAGAGGTCAGCTGATGGCAATGAATCCAAGCCTCCCCGTCTTGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGCGGAGCAGATACCACTGATAATGACAAACAGACAAGGATAGAGGGTGCTGAGATCAATAAGAGCTTACTCGCCCTGAAGGAGTGCATAAGAGCTCTTGATAATGACCAGGGACACATCCCTTTCCGAGGCAGTAAATTGACTGAAGTTTTGAGGGATTCATTTGTTGGTAACTCCCGCACCGTTATGATATCATGCATATCACCAAGTTCTGGTTCTTGTGAGCATACCCTAAATACATTAAGATACGCTGACAGGGTGAAAAGCCTATCAAAAGGGAACAACCTGAAGAAGGATGTTTTATCTTCAACTTTCAATCCCAAAGAATCAACTACCATTCCCTTATCTGCGGTTCCTACATCAACCTTTGAGGATCGCCACACTGAAGCATGGCCTGAAGAAAATGATGGAGATGAATTTAGTCCATCTGAAGAATACTATGAGCAGGTGAAACCATCATGGAAGAAAAATGGAAAGATAGAGCCATTTGGTACTGCAGATGACAAATTAAAGAAACCTAATTGTCAGACTCAGATCAAATGGGAGGACCTCCCAAAAGTTGAACCTAAAGTTGCATATCCAGATGATGATTTAAATGCCCTCTTACAGGAAGAGGAGGACCTCGTAAATGCTCACCGGAAACAAGTAGAGGAGACTATGAATATTGTGAAAGAGGAGATGAACCTCTTGGTTGAAGCAGATCAACCAGGAAATCAGCTAGATAATTATATCACAAGATTAAATGCCATTCTATCTCAGAAGGCTGCTGGCATCATGCAGTTACAAACCCGTTTAGCTCATTTCCAGAAACGTCTGAAGGAGCATAATGTTTTGGTTTCATCTGCTGGCTACTGA 2112 0.4361 MNGAGRQGQRSGATGVHHQRQYSDNFLDSSSNGRWLQSAGLQHLQTSGNPIPPLQDYNFYGGGEQGTRMLRNAQRSFNGMNEYCMEPSTPPGNYRASSQKKNGEDSPGDFSPGLLDLHSFDTELLPEMPVSNMYNGTSMCQPVQGRSFDDSEPYISAKLTGRARVPENNLLKSFSADKEKSSSVAKIKVVVRKRPLNKKELAKNEEDIIETHSNSLTVHETKLKVDLTQYVEKHEFVFDAVLNEEVTNDEVYHETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLSDRKKLCMREDGKQQVCIVGLQEYRVSDVETIKELIEKGNSTRSTGITGANEESSRSHAILQLAIKRSADGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNNLKKDVLSSTFNPKESTTIPLSAVPTSTFEDRHTEAWPEENDGDEFSPSEEYYEQVKPSWKKNGKIEPFGTADDKLKKPNCQTQIKWEDLPKVEPKVAYPDDDLNALLQEEEDLVNAHRKQVEETMNIVKEEMNLLVEADQPGNQLDNYITRLNAILSQKAAGIMQLQTRLAHFQKRLKEHNVLVSSAGY 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1675 703 Pfam Kinesin motor domain 192 508 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere11g1675 703 ProSitePatterns Kinesin motor domain signature. 408 419 IPR019821 GO:0003777|GO:0005524|GO:0007018
Dere11g1675 703 PRINTS Kinesin heavy chain signature 375 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere11g1675 703 PRINTS Kinesin heavy chain signature 459 480 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere11g1675 703 PRINTS Kinesin heavy chain signature 266 287 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere11g1675 703 PRINTS Kinesin heavy chain signature 409 427 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere11g1675 703 PANTHER KINESIN-RELATED PROTEIN 6 30 556 IPR027640 GO:0003777|GO:0007018
Dere11g1675 703 MobiDBLite consensus disorder prediction 1 29 - -
Dere11g1675 703 SMART kinesin_4 184 515 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere11g1675 703 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 509 IPR027417 -
Dere11g1675 703 ProSiteProfiles Kinesin motor domain profile. 186 509 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Dere11g1675 703 FunFam Kinesin-like protein 167 512 - -
Dere11g1675 703 MobiDBLite consensus disorder prediction 80 109 - -
Dere11g1675 703 Gene3D Kinesin motor domain 165 512 IPR036961 -
Dere11g1675 703 CDD KISc_KIF2_like 186 507 - -
Dere11g1675 703 MobiDBLite consensus disorder prediction 91 105 - -
Dere11g1675 703 Coils Coil 621 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1675 Dere-ChrDere11 30399435 30404566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1675 186 509 Calmodulin-binding Proteins AT5G65930 34.731 6.09e-44 169