Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1671 ATGAAACGCGGTGGGTGTACCATACGGTATGGACTTGACCTTCTTCAGCCATCTACTTCCTCAGCTGCGTCTAGGGCTTCTGCATCTGCCTCGATGGGGAAGGGTACGGGGAGTTTCGGTAAGAGGAGGAACAAGACCCACACTCTATGCGTGAGGTGTGGCCGCCGCAGCTTTCATCTCCAGAAGAGTCGCTGCTCTGCCTGTGCTTTCCCTGCTGCCCGCAAGAGGAAATATAACTGGAGTGTTAAGGCAATCCGTAGAAAGACTACTGGAACTGGTAGGATGAGGTACTTGCGTAATGTGCCTCGCAGATTCAAGAGTGGCTTCAGAGAAGGTACCCAAGCCGCACCCAGGAAAAAGGGAGCAGCTGCTTCTGCTTAA 381 0.5328 MKRGGCTIRYGLDLLQPSTSSAASRASASASMGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCSACAFPAARKRKYNWSVKAIRRKTTGTGRMRYLRNVPRRFKSGFREGTQAAPRKKGAAASA 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1671 126 Hamap 50S ribosomal protein L37e [rpl37e]. 33 84 IPR001569 GO:0003735|GO:0005840|GO:0006412
Dere11g1671 126 Pfam Ribosomal protein L37e 34 84 IPR001569 GO:0003735|GO:0005840|GO:0006412
Dere11g1671 126 MobiDBLite consensus disorder prediction 23 42 - -
Dere11g1671 126 ProSitePatterns Ribosomal protein L37e signature. 35 54 IPR018267 GO:0003735|GO:0005840|GO:0006412
Dere11g1671 126 PANTHER 60S RIBOSOMAL PROTEIN L37 32 125 - -
Dere11g1671 126 MobiDBLite consensus disorder prediction 107 126 - -
Dere11g1671 126 FunFam Ribosomal protein L37 32 119 - -
Dere11g1671 126 SUPERFAMILY Zn-binding ribosomal proteins 32 86 IPR011332 GO:0006412
Dere11g1671 126 Gene3D - 32 118 IPR011331 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1671 Dere-ChrDere11 30382749 30383820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1671 32 126 Cytoplasmic Ribosomal Protein Gene Family AT1G52300 88.421 7.05e-59 175