Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1668 ATGGTTCGGGCGAAGGCAAGAGGATGTGGAGGCGCAAAAGAAATCTCACAAAACGACGGGGCGGGAGGACAACCTCCATACCGAAGAAGAAACCCTTCTTTGCCGGCCATAGCTTCACCGTCTCCGGAGATATCTCAGGTAGCCTCTCCTCCGCCGCCGGCTATGACTGCGACTCCGAGTAATTCCACGCCACCTTCCTCATTTCTGGCGTCGCCGCCTCCTTCGGACGCGTCGCTAGCGCCAACGTCAGAACCATCGGAGGGAATGCCGAGGGGTACATTAATAGGACTAGTGATAGGGACTGTGTTTGGCTCGCTGCTTATGCTGGTTTTTGTGGGCGTTTGCGCCTTTTGCTATAAAAGGAGAAAGCGGAGACGGATGAGACGATATGGGTTGGACAACTGCTCTACTGATCCTCCACCTCAACCTAAAGCTGATCAGTTTGGTGGTCCACCTCAGCGTTGGCAGCAGACTATTACTCCTCCAACAGATGGTGGAGCAACATCGTTTCCAAAGCCAACTCCGCCCCTCGGAGTTGGTTTGAATCAGCCATTATCCAATAGTGTCATATCTCCCCCTATGAATTCTATGACCAACTCAAGTTTGGAATCTGAGAGACCATACCCTGCACCATCTCCTGCCATTGCCTTGGGATTTTCACAAAGCACATTTACATATGAAGAATTATATTTCGCAACAAATGGATTCTCAGCCTCAAATCTTCTTGGCCAAGGCGGTTTTGGCTATGTACATAAAGGAGTCCTCCCAAATGGAAAGACTGTTGCAATTAAGCAACTGAAATCTGGGAGCAGACAAGGGGAGCGTGAGTTCCAGGCTGAAGTCGAGGTCATTAGCCGAGTCCATCACAGACATCTTGTTTCCCTAGTTGGATACTGCATTGCTGGAGCCCAGAAGATGCTTGTTTACGAGTTTGTCCCAAATAACACGCTAGAATTCCATTTACATGGAAAAGATAGAGCAACTATGGATTGGGCTACAAGGATGAAGATTGCTATTGGATGCGCAAAAGGATTGGCCTATCTGCATGAGGACTGTCAACCAAAAATTATACACCGTGACATCAAGGCATCTAACATTCTTCTTGATGGAAATTTTGAGGCAAAGGTTGCAGATTTTGGACTTGCAAAATTTTCCGCAGATACTGATACCCATGTCTCCACTCGAGTAATGGGAACCTTTGGATACTTGGCTCCAGAATATGCTGCCAGTGGAAAACTCACTGATAAGTCAGATGTCTTCTCCTTCGGGGTTGTGCTTTTGGTGTTGATTACTGGACGAAAACCTGTTGATAAAACCGAGTCTTTCACAGATGACAGTATGGTTGAGTGGGCAAGACCTTTACTATCCCAAGCGATGGAAAATGGCAACTTTGATGTTCTTGCTGATCCAAGGTTGCAGAAGAGTTACAACTCTGACGAGATGGTTCGAATGATTGCTTGTGCTGCAAATTGTGTGCGCTATTCAGCCAGGCGTCGCCCTCGAATGAGCCAGGTAGTTCGAGCTCTAGAAGGTAATATTTCTCTGGATGATCTGAGTGAGGGGAGCACACCTGGGCACTGCGGAGCATTCAGTTCCTTTGAGAGTTCAGGTTATGATACTGGCCAATACAATGAGGACCTAAAGAAGTTCAGGAAGCTGGCATTAGAGCAAGGAACTAGTGAATACAGTGGGCCCAGTAGCGAGTTTGGTCAACATCAGTCTGCCTCAAGCAGTTCAGGCCAGCAAAATGCACATGAAACATAA 1764 0.4762 MVRAKARGCGGAKEISQNDGAGGQPPYRRRNPSLPAIASPSPEISQVASPPPPAMTATPSNSTPPSSFLASPPPSDASLAPTSEPSEGMPRGTLIGLVIGTVFGSLLMLVFVGVCAFCYKRRKRRRMRRYGLDNCSTDPPPQPKADQFGGPPQRWQQTITPPTDGGATSFPKPTPPLGVGLNQPLSNSVISPPMNSMTNSSLESERPYPAPSPAIALGFSQSTFTYEELYFATNGFSASNLLGQGGFGYVHKGVLPNGKTVAIKQLKSGSRQGEREFQAEVEVISRVHHRHLVSLVGYCIAGAQKMLVYEFVPNNTLEFHLHGKDRATMDWATRMKIAIGCAKGLAYLHEDCQPKIIHRDIKASNILLDGNFEAKVADFGLAKFSADTDTHVSTRVMGTFGYLAPEYAASGKLTDKSDVFSFGVVLLVLITGRKPVDKTESFTDDSMVEWARPLLSQAMENGNFDVLADPRLQKSYNSDEMVRMIACAANCVRYSARRRPRMSQVVRALEGNISLDDLSEGSTPGHCGAFSSFESSGYDTGQYNEDLKKFRKLALEQGTSEYSGPSSEFGQHQSASSSSGQQNAHET 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1668 587 ProSiteProfiles Protein kinase domain profile. 236 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1668 587 Pfam Protein tyrosine and serine/threonine kinase 239 509 IPR001245 GO:0004672|GO:0006468
Dere11g1668 587 MobiDBLite consensus disorder prediction 1 88 - -
Dere11g1668 587 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 106 560 IPR047117 -
Dere11g1668 587 SMART serkin_6 236 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1668 587 SUPERFAMILY Protein kinase-like (PK-like) 213 509 IPR011009 -
Dere11g1668 587 Gene3D Transferase(Phosphotransferase) domain 1 312 520 - -
Dere11g1668 587 Gene3D Phosphorylase Kinase; domain 1 209 311 - -
Dere11g1668 587 FunFam proline-rich receptor-like protein kinase PERK1 214 311 - -
Dere11g1668 587 MobiDBLite consensus disorder prediction 131 153 - -
Dere11g1668 587 MobiDBLite consensus disorder prediction 45 59 - -
Dere11g1668 587 MobiDBLite consensus disorder prediction 560 587 - -
Dere11g1668 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 356 368 IPR008271 GO:0004672|GO:0006468
Dere11g1668 587 ProSitePatterns Protein kinases ATP-binding region signature. 242 264 IPR017441 GO:0005524
Dere11g1668 587 FunFam Proline-rich receptor-like protein kinase PERK1 312 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1668 Dere-ChrDere11 30364920 30369915 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1668 206 555 Trihelix Transcription Factor Family AT1G70460 64.286 1.10e-157 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dere11g1668 PK_Tyr_Ser-Thr 9.6e-47 CL0016