Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1667 ATGTCTTCACCGTCTCCGGAAAGCCCCCAGCCCCCCCTTGGGGAGCCTGCAACCTCCACTTACAGCTCTCCGCCCGAGCCTCCTCCGGCGCCGACTATTGCCCCTTCCCCGACTATAGTGTCGCCGGCTTCGCCGGCTGCCACTGCCCCTTCCAAGACTACAGAACGGCCGACTTCACCTGGCCCCTGGGTGACGCCAGGGAGAGAAACGCCGAGGGCCACATTCATCGGACTAATTATAGGGAGTGTGCTTGGCTCGCTGCTGCTTCTGCGGATTTTGGCCGCCTGTGTCTGTTTGTATAGAAGGAGGATGCAGAGGGGGATGAGACCTCCACAGCCACACCAACCGAACGTTGATGAAGAGTTTGGTGGGTCGCCTCAGCACCGGCAAGAGGCTACTCCACCAACAGATGGTAAAGCAATTCCAAAGCCAACTTTACGTCTGCCCGCCCTGGAATTTGAGAGACCAAACCTTGGAGTCACACCGTATCCTGCCCTTGCCTTGGGACTCTCAGGAAGCACATTCACATATGAAGAATTAGCATTCGCAACGAGTGAATTCTCAGACTCAAATCTTCTCGGTGAAGGTGGTTTTGGCTATGTCCATAAAGGAGTCCTCCCAGATGGAAGAACTGTTGCAATTAAGCAGCTGAAATCTGGAAGCCTCCAGGGGGAGCGTGAGTTCCTGGCTGAAGTCCAGGTCATTAGCCGAATCCATCACAGACATCTCGTTTCCCTAGTTGGATACTGCGATGATGGAGCACAGAGGATGATGCTTGTTTATGAGTTCGTGCCAAATAATACACTAGAATTCCATTTGCATGGAAAATACAGAGCAACTATGGACTGGGCAACAAGGATGAAGATTGCTATTGGATCTGCTAAAGGATTGGCATATCTGCATGAAGACTGTCAACCCAGAATCATACATCGTGACATCAAAGCTTCTAACATTCTTCTTGATGATCATTTTGAAGCAAAGGTTGCAGATTTTGGACTTGCCAAATTTTCATCAGACACTAATTCTTACATCTCTACTCGAATAATGGGAACTATAGGATACTTGGCTCCAGAATATGCTGCCAGTGGGAAACTCACTGATAAGTCAGACGTCTTCTCCTTTGGAGTTGTGCTTTTGGAATTGATTACAGGACGAAGACCTGGTAGTAAAACTGAGTCTTTTACAGATGACAGTATGGTTGAGTGGGCAAGACCTTTACTCTCCCAAGCTTTGGAAAATGACAACTCCGATGTTCTTGCTGATCCAAGGTTGCAGAAGAATTACAACCCTCATGAGATGATTCGAATGATTTCTTGTGCTGCAAAATGCGTGAGCCGTTCAGCCAGAAGTCGGCCTCGAATGAGCCAGGTAGTTCAAGCTCTTGTAGGAAATATTTCTATGGATGATCTGAACGAGGGAAACACATACCGGCGATCAAGTTCTGAGTCTCGCCAAAACAATGAAGACAGAAAGAAGTTCTGGAAGCAGGCACCAGAAGGCCAAGGATATAGCCCTAGTGAATACAGTGGACCTAGTAGTGAGTATGATCAACATTTCTCTGCCTCCAGCAGTTCGGGCCAGCAAAATTCTCGAGAGACATGA 1602 0.4863 MSSPSPESPQPPLGEPATSTYSSPPEPPPAPTIAPSPTIVSPASPAATAPSKTTERPTSPGPWVTPGRETPRATFIGLIIGSVLGSLLLLRILAACVCLYRRRMQRGMRPPQPHQPNVDEEFGGSPQHRQEATPPTDGKAIPKPTLRLPALEFERPNLGVTPYPALALGLSGSTFTYEELAFATSEFSDSNLLGEGGFGYVHKGVLPDGRTVAIKQLKSGSLQGEREFLAEVQVISRIHHRHLVSLVGYCDDGAQRMMLVYEFVPNNTLEFHLHGKYRATMDWATRMKIAIGSAKGLAYLHEDCQPRIIHRDIKASNILLDDHFEAKVADFGLAKFSSDTNSYISTRIMGTIGYLAPEYAASGKLTDKSDVFSFGVVLLELITGRRPGSKTESFTDDSMVEWARPLLSQALENDNSDVLADPRLQKNYNPHEMIRMISCAAKCVSRSARSRPRMSQVVQALVGNISMDDLNEGNTYRRSSSESRQNNEDRKKFWKQAPEGQGYSPSEYSGPSSEYDQHFSASSSSGQQNSRET 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1667 533 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 90 496 IPR047117 -
Dere11g1667 533 Pfam Protein tyrosine and serine/threonine kinase 191 461 IPR001245 GO:0004672|GO:0006468
Dere11g1667 533 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Dere11g1667 533 SUPERFAMILY Protein kinase-like (PK-like) 169 461 IPR011009 -
Dere11g1667 533 MobiDBLite consensus disorder prediction 1 68 - -
Dere11g1667 533 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 165 263 - -
Dere11g1667 533 ProSitePatterns Protein kinases ATP-binding region signature. 193 215 IPR017441 GO:0005524
Dere11g1667 533 MobiDBLite consensus disorder prediction 482 496 - -
Dere11g1667 533 MobiDBLite consensus disorder prediction 502 533 - -
Dere11g1667 533 MobiDBLite consensus disorder prediction 468 533 - -
Dere11g1667 533 MobiDBLite consensus disorder prediction 21 38 - -
Dere11g1667 533 CDD STKc_IRAK 193 461 - -
Dere11g1667 533 MobiDBLite consensus disorder prediction 39 60 - -
Dere11g1667 533 Gene3D Phosphorylase Kinase; domain 1 168 263 - -
Dere11g1667 533 ProSiteProfiles Protein kinase domain profile. 187 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1667 533 FunFam proline-rich receptor-like protein kinase PERK8 264 476 - -
Dere11g1667 533 SMART serkin_6 187 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1667 533 Gene3D Transferase(Phosphotransferase) domain 1 264 485 - -
Dere11g1667 533 MobiDBLite consensus disorder prediction 107 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1667 Dere-ChrDere11 30357531 30362573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1667 164 533 Trihelix Transcription Factor Family AT1G70460 57.713 1.52e-138 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dere11g1667 PK_Tyr_Ser-Thr 2.7e-47 CL0016