Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1651 ATGGATTATGATTATGGTTGTATAGTCAAATTCTTATACCCAAGAATTTTGAATCTTTTGATTGACATATTTACCAATAAAGGAATTCTTTTTCGGTCAAAGCATAAGCGAAATCTAAGGTGGATTCTTACCGACCGACACTTGGCCATGGGCTCAACTGTCATGAGACTCATGACACTGCTTCTGAGCTTATTGAGATACGGTTGGAGGAGAAGCAAGAAGCATAGGATAGAGGCGAATGTAGCGGATAACTCCTCGTCTTCTTCCTACGCACAGCCACTGGGCCCCGCTTTCCGACTCGCTTTCTTTGTTTCCTTGCCGTCGTCTTTCTTACACGCTTTTTGGATTCAATCCCATCGCTTTCTTTCGACCTCTGCATTTGAAACGCCATTCACAGAGGAATCTGTGGAAGGTTACTCTCTTGCGAGGTTTGGAAAAGGTTTGTCCCATTTCGTCATGCGGGGACGCCTTGTTGATCCGTACAAGCGAGTGGCATCCAGGGAATACATAATTTCATATGGCAAAGAAGAAAATTCGGTACGTTTACTGAATGGAAAACCTTCTTGGAAGCGATCTTTGCGGCATGTACTAGTGGCTTCAATATCTTCATTTTTATATTGCTACCATCTCGGAGTGGTTAATGAAACCCTAGAGAGCATTTCCATAGACCTTGGCTTTAGAGGGAATACCATGGCTGAAGGTCTGGTAGTAAGTATGTCTTTAGGCGGTGCTATTGTTGGATCTCTATTCAGTGGGTGGATTGCCGATGGGGTTGGGCGTAGAAGGGCATTCCAGTTGTGTGCTTTGCCAATGATCATTGGGGCATCAATGAGTGCAACATCAAAAAGCCTGTGGGGTATGCTTTTGGGAAGGTTATTTGTTGGCACTGGAATGGGACTTGGCCCACCTGTTGTAGCTCTTTATGTGGCTGAGGTGTCACCTGCAGCTGTAAGGGGTGCTTTTGGTAGCATAACTCAAATTGCAGCATGTATTGGACTTATGGCCTCTCTCTTTATTGGACTTCCAGCCAAAGAAATAGTGGGTTGGTGGCGGATTTGTTTCTGGGTATCTGCCATTCCTGCTGCAATTTTAGCCTTCTTCATGGAGTTCTGTGCAGAGTCTCCTCATTGGCTGTATAAGAGAGGAAGAGGCAATGAGGCTGAAGCTGAATTTGAGAAGCTATTGGGAGGGATCCATGTGAAACCTGCGATGACTGAACTGTTAAGGTCTGACAGAGGTGATGAGACTGATAAGGTGAAACTCTCAGAATTACTCTATGGCCGTTATTTCAAAGTGATGTTCATTGGATCTACACTTTTTGCTTTACAGCAGCTATCTGGCATAAATGCTGTTTTTTATTTCTCTTCAACTGTCTTTAAAAGCTTTGGTGTACCATCAGATATTGCAAACACGTGTGTAGGACTTTGCAATTTACTAGGGTCAATTCTTGCAACGATTTTGATGGATAAACTTGGAAGGAAAGTGCTCCTCCTGGGGAGCTTTCTGGGAATGGCTGTGTCAATGGGTCTCCAAGTTATTGCTGCAAGTTCTTTGACATCCGGATCTGGGGCAATGTATCTATCTGTCGGTGGCATGTTGATGTTTGTCTTAACATTTTCCCTTGGTGCTGGTCCAGTACCTAGTCTTCTCCTGTCAGAAATACTACCTGGCAGGATTAGGGCAAAGGCATTGGCACTTTGCTTGGCTGTGCATTGGGTGATAAATTTCTTTGTTGGTCTGTTATTTTTGCGCTTGTTGGAGCAAATCGGTGCTCAACTTCTATATAGTATTTTTGGTGCATTCTGTATGGTGGCAGTGATGTTTGTGAAGAAGAATATTGTGGAAACAAAAGGGAAGTCACTTCAAGAAATCGAGTTTGCACTTCTTCCACAAGAAGCAACATAA 1905 0.4367 MDYDYGCIVKFLYPRILNLLIDIFTNKGILFRSKHKRNLRWILTDRHLAMGSTVMRLMTLLLSLLRYGWRRSKKHRIEANVADNSSSSSYAQPLGPAFRLAFFVSLPSSFLHAFWIQSHRFLSTSAFETPFTEESVEGYSLARFGKGLSHFVMRGRLVDPYKRVASREYIISYGKEENSVRLLNGKPSWKRSLRHVLVASISSFLYCYHLGVVNETLESISIDLGFRGNTMAEGLVVSMSLGGAIVGSLFSGWIADGVGRRRAFQLCALPMIIGASMSATSKSLWGMLLGRLFVGTGMGLGPPVVALYVAEVSPAAVRGAFGSITQIAACIGLMASLFIGLPAKEIVGWWRICFWVSAIPAAILAFFMEFCAESPHWLYKRGRGNEAEAEFEKLLGGIHVKPAMTELLRSDRGDETDKVKLSELLYGRYFKVMFIGSTLFALQQLSGINAVFYFSSTVFKSFGVPSDIANTCVGLCNLLGSILATILMDKLGRKVLLLGSFLGMAVSMGLQVIAASSLTSGSGAMYLSVGGMLMFVLTFSLGAGPVPSLLLSEILPGRIRAKALALCLAVHWVINFFVGLLFLRLLEQIGAQLLYSIFGAFCMVAVMFVKKNIVETKGKSLQEIEFALLPQEAT 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1651 634 Gene3D MFS general substrate transporter like domains 189 628 IPR036259 -
Dere11g1651 634 PRINTS Sugar transporter signature 203 213 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere11g1651 634 PRINTS Sugar transporter signature 529 550 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere11g1651 634 PRINTS Sugar transporter signature 443 453 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere11g1651 634 PRINTS Sugar transporter signature 288 307 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere11g1651 634 PRINTS Sugar transporter signature 552 564 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere11g1651 634 NCBIfam sugar porter family MFS transporter 194 624 IPR003663 GO:0016020|GO:0022857|GO:0055085
Dere11g1651 634 SUPERFAMILY MFS general substrate transporter 186 625 IPR036259 -
Dere11g1651 634 ProSitePatterns Sugar transport proteins signature 1. 251 268 IPR005829 GO:0016020|GO:0022857|GO:0055085
Dere11g1651 634 ProSiteProfiles Major facilitator superfamily (MFS) profile. 195 617 IPR020846 GO:0022857
Dere11g1651 634 FunFam facilitated trehalose transporter Tret1 188 629 - -
Dere11g1651 634 Pfam Sugar (and other) transporter 196 625 IPR005828 GO:0016020|GO:0022857|GO:0055085
Dere11g1651 634 PANTHER SOLUTE CARRIER FAMILY 2 186 626 IPR045263 -
Dere11g1651 634 CDD MFS_GLUT_like 198 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1651 Dere-ChrDere11 30207406 30215697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1651 161 573 Organic Solute Cotransporters AT1G67300 67.612 0.0 551