Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1649 ATGGGCGTTTCATTTAAGGCCCTCAACAAAAATTTCAGGCTCCTCCTTTTTCATAAACGCTCTCTGATTTCAGCTTCTTCATTAGCTTCCTCTTTTCTCACTCTCTCACCGCTTCCTGCATACCCCAGGTTTTGTTTCTCGCAGTTTCGGTTACACTCATCATCAACTTCTGCTGCATTTATGGAGGTGATCAGAGCAGTTGTTAAACAAGGGCTTGCAGCTCATGACAGTGTTGCTATCAGAGCAGATGAAAAGAGTTACGGTTACATGCAGCTAGCATCATCTGCAGAGGAGATATCAAATCTCTTGTGTGGCAATGACATGAAATCAGGAAATCTTGGTGGAGCTCGAATAGGGATTGTAGCCAAACCATCTGCTGAGTTTGTTGCTGGAATGCTAGGGACTTGGCTTAGTGGAGGTGTTGCTGTGCCACTTGCACTGGGCTATCCGGAAGCGGAGCTATTGTACGTGATGAATAATTCTGATGTGTCTGCAATACTGAGTACTGAAGATCATAGTGGAGTAATGAAAAATATTGCCAATAAAACCTCTTCTCAGTTTTTTCTTATTCCCCCTGTTCCCAATAAGTCTTCAGAGGAAAGCAGAGATGAACATTCACGAAGTAGAGAAATTGATGCAGAAAGAATTTTACAGGGGAATATCAACAGGTCATGTGAGGATCCGGCATTGATTTTGTACACTAGCGGGACAACAGGTAAACCTAAGGGAGTAGTTCACACGCACCGAAGTATTAGTGCACAGGTCCAAACCTTGACAAATGCATGGGAGTACACATCTGCTGATCAATTTCTGCATTGTCTACCATTACATCATATCCATGAAATCTTTAATGTTGACTTTATGCCGAAATTTAGTGTGAGAGGAATTTGGCAGAGATGGCGTGAGTCATATCCAGCCGAAGGAACTAAGGCTGACGATGCTATAACTGTGTTTACTGGAGTTCCAACCATTTATACCAGATTGATACAAGGTTACCAAGCAATGGATCCTGAGTTGCAAGCTGCTTCAGCAGCTGCTGCAAGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCGCTTGTTGGAGCGGTATGGCATGACAGAATTTGTCATGGCAATATCAAATCCCCTGAAAGGCGAGCGGAAGGCAGGTACTGTTGGAAAACCTTTTCCTGGTGTGCAGGTGAAGATTCTTGCAGATGAGAGTGAAAGTAATACAATTAAAGTGGGTGAGCTTTGCATTAAAAGTCCATCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTGACTAAGGAATCATTTATTGATGATGGCTTCTTCAAAACTGGAGATGCAGTTACTATGGATGAAGATGGATATTACATCATTCTGGGACGTACTAATGCTGATATAATGAAGGTTGGTGGCTACAAACTGTCTGCATTAGAAATTGAATCAGTTATATTGGAGAACCCAACTGTCTCAGAATGTTGTGTTTTGGGCTTACCAGACAAAGCTTATGGAGAAGTTGTTTGTGCAATTATTGTGCCAGAGGCTGACACTAAAAGAAAGCGAGAAGAAGAATCAAAGCCTGCTATAACCTTAGAAGAATTGTCCTCCTGGGCCAAAGATAGACTTGCACCTTACAAGATACCGACTCGACTCTTCCTGTGGGACTCTCTTCCTCGTAATGCAATGGGGAAGGTCAACAAAAAAGAGTTGAAGAAAGTGCTGGCTTCAGAACAGTAA 1776 0.4274 MGVSFKALNKNFRLLLFHKRSLISASSLASSFLTLSPLPAYPRFCFSQFRLHSSSTSAAFMEVIRAVVKQGLAAHDSVAIRADEKSYGYMQLASSAEEISNLLCGNDMKSGNLGGARIGIVAKPSAEFVAGMLGTWLSGGVAVPLALGYPEAELLYVMNNSDVSAILSTEDHSGVMKNIANKTSSQFFLIPPVPNKSSEESRDEHSRSREIDAERILQGNINRSCEDPALILYTSGTTGKPKGVVHTHRSISAQVQTLTNAWEYTSADQFLHCLPLHHIHEIFNVDFMPKFSVRGIWQRWRESYPAEGTKADDAITVFTGVPTIYTRLIQGYQAMDPELQAASAAAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMAISNPLKGERKAGTVGKPFPGVQVKILADESESNTIKVGELCIKSPSLFKEYWKLPEVTKESFIDDGFFKTGDAVTMDEDGYYIILGRTNADIMKVGGYKLSALEIESVILENPTVSECCVLGLPDKAYGEVVCAIIVPEADTKRKREEESKPAITLEELSSWAKDRLAPYKIPTRLFLWDSLPRNAMGKVNKKELKKVLASEQ 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1649 591 SUPERFAMILY Acetyl-CoA synthetase-like 63 589 - -
Dere11g1649 591 Pfam AMP-binding enzyme C-terminal domain 492 577 IPR025110 -
Dere11g1649 591 Pfam AMP-binding enzyme 75 482 IPR000873 -
Dere11g1649 591 MobiDBLite consensus disorder prediction 192 211 - -
Dere11g1649 591 FunFam Acyl-CoA synthetase family member 3 69 475 - -
Dere11g1649 591 ProSitePatterns Putative AMP-binding domain signature. 231 242 IPR020845 -
Dere11g1649 591 CDD MCS 76 585 - -
Dere11g1649 591 MobiDBLite consensus disorder prediction 197 211 - -
Dere11g1649 591 Gene3D - 479 591 IPR045851 -
Dere11g1649 591 Gene3D - 61 475 IPR042099 -
Dere11g1649 591 PANTHER ACYL-COA SYNTHETASE 64 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1649 Dere-ChrDere11 30175950 30182817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1649 226 589 Monolignol Biosynthesis Gene Families AT4G19010 26.702 7.63e-37 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1649 11 30175950 30182817 Dere11g1649 11 30175950 30182817 ECH