Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1646 ATGGAGGCATCTTCAGGTCAAAGACGAAGGGGTGGCCTCATTACTATGCCCTTTATTATAGCAAATGAGGCATTTGCGAAGGTGGCAATCGTTGGGCTACTGCCAAACATGGTGTTATATCTGATAGGAGCTTACAAGCTAAGAGTAGCCAAAGCTACCAATATACTCCTCTTCTGGTTTGCTGCCTGCAATTTTACTCCCATCATTGGTGCCTTCTTTGCTGATTCATTTCTGGGTCGCTTCCTTTCCATTGGCTTTGGTTCCATTATCTCTTTCCTGGGGATGGCATTCATGTGGTTAACAACTATGATCCCACAGTTAAGGCCAATCCAATCAGCAACACCATCTCAAATGGCATTCTTACTCACAAGCCTTGCTCTCATATCCATTGGAGGCGGTGGCATCTCATGTTCCTTACCATTTGGTGCAGATCAGCTCAACAACAAAGCCAACCCTAATAACCAGAGGGTGTTAGAGAGCTTCATCAGCTGGTACGTTGCTTCTCAAGCCTTCTCAGTTTTAGTTGCCTTGACAGGAGTGATTTACGCACAAGACCACCTAGGATGGAAAGTGGGTTTTGGTATTCCAGCAGGTCTTATGTTCTTGTCCATTGTCTTGTTCTTCCTTGCTTCTCCACTCTATGTCAAGAACAAACCACACAGCAGCTTGCTCACTGGATTTGCCCAGGTCATTGTTGTTGCCTATAAGAACAGAAAGCTTCCATTTCCTCCTAATAACCCTGCTGGAAAGTACCATCATAAGAAGGGCTCAGATCTTCTTGTTCCAACCAATAAATTGAGGTTTCTGAACAAAGCCTGCATAATAAAAAACCCAGAACAAGATATAACCCCAGATGGCTTAGCCTCAAACCCATGGAGTCTCTGCACAACAGAGCAAGTAGAAGAACTAAAAGCCATCATAAAGGTCCTTCCTTTATGGTCCTCAAACTTCATGATGTCAGTGGGCACCAGCCAAACCTCGTTCCGTGTCCTGCAAGCTAAGACCATGGACAGACACATCACCTCAACCTTCGAAATCCCCGCAGGTTCCTTCAGTGCCTTCATGGTCTTCTTCCTCTTCCTCACAGTCGGCCTCTACGACCGCATCATCATCCCATTAGCTTCAAAAATCACAAAGAAACAAGTCCGAATCAGCGCCAAGACCAGAATGGGAATAGGCTTGTTCTTCAGCGTTCTAGACTTCATAGCCTCAGCAATCATCGAGCACAAGAGGAGAAACACAGCAATCCGCGAAGGGTTTGCAGATAAACCAAATGGGGTGATAGACATGTCAGCAATGTGGCTTGTTGTCCATCACTTGTTGTTGGGGATAGCAGAGGCGTTCAATTCCATAGGACAATCGGAGTTCTATTACTCGGAGTTTCCGAGGACAATGTCGAGCATTGGGTCGTCTCTGTTCAGTTTGGGAATGGGTGTGGGGAATCTGGTGGCTTCATTGATAGTGAGTATTGTGGATGATGTTAGCTCAAGAGGAGGAAGAGAGAGTTGGGTCAGTGATAATCTGAATAAAGGGCATTATGATAGGTATTTCTGGGTACTAGCAATGTTGAGTGGTGTGAATTTTATGTACTATTTGGCATGTAGTTGGGCTTATGGACCTAGTGCTAGAACTGAATCTGTGGAGGAAGAACAGTTAGATCAGGGAAAGAAAGAGGAAGAGAAAGGAGAATGTGAGAGAAATGGTGAAGCCCCAATAATTCATGCTTTTGTTTGA 1734 0.4498 MEASSGQRRRGGLITMPFIIANEAFAKVAIVGLLPNMVLYLIGAYKLRVAKATNILLFWFAACNFTPIIGAFFADSFLGRFLSIGFGSIISFLGMAFMWLTTMIPQLRPIQSATPSQMAFLLTSLALISIGGGGISCSLPFGADQLNNKANPNNQRVLESFISWYVASQAFSVLVALTGVIYAQDHLGWKVGFGIPAGLMFLSIVLFFLASPLYVKNKPHSSLLTGFAQVIVVAYKNRKLPFPPNNPAGKYHHKKGSDLLVPTNKLRFLNKACIIKNPEQDITPDGLASNPWSLCTTEQVEELKAIIKVLPLWSSNFMMSVGTSQTSFRVLQAKTMDRHITSTFEIPAGSFSAFMVFFLFLTVGLYDRIIIPLASKITKKQVRISAKTRMGIGLFFSVLDFIASAIIEHKRRNTAIREGFADKPNGVIDMSAMWLVVHHLLLGIAEAFNSIGQSEFYYSEFPRTMSSIGSSLFSLGMGVGNLVASLIVSIVDDVSSRGGRESWVSDNLNKGHYDRYFWVLAMLSGVNFMYYLACSWAYGPSARTESVEEEQLDQGKKEEEKGECERNGEAPIIHAFV 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1646 577 Gene3D MFS general substrate transporter like domains 2 545 IPR036259 -
Dere11g1646 577 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 11 538 - -
Dere11g1646 577 MobiDBLite consensus disorder prediction 547 570 - -
Dere11g1646 577 SUPERFAMILY MFS general substrate transporter 15 540 IPR036259 -
Dere11g1646 577 CDD MFS_NPF1_2 16 538 - -
Dere11g1646 577 MobiDBLite consensus disorder prediction 547 568 - -
Dere11g1646 577 Pfam POT family 84 504 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1646 Dere-ChrDere11 30157757 30161313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1646 1 560 Organic Solute Cotransporters AT1G52190 54.861 0.0 661