Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1644 ATGATGGGTGGGAACAATAACTGGTGGAACAATATGCATGGATATGTGCTTGGATCTTCAATTCCTTTCAATTCTCTCACAGAAAACCCAGAGCCTCCTCCTTCCTGGAGCCAACTGCTCTTCTCTGGAGTGCCAGGAGAAGAAGAGAGATTGGGTTTTGACCATTTTCAACCTAAGAAGTTGGAAACCTGGGATGAACAAATTCTTAATCCATCATTGTCTAGAGTTCAGCTTGTTGATGAATTAAAGCAAGAGGTTTCTCAAGGTGGCAACTTGTACGGCCATGGGGGTGAGGAATTTCAGGGTACTTCTTCTGGGTCAGCTAATTGGTCACACATGGTGGTCCCTGTTTCTTCTTCTCCTAGGTCTTGCGTCACTAGCTTGAGTAGTAACAACAATAATAATAACAACAAAATATTGGATTTCACTTACAATATGGAAGAGAATAGGAAAAGTCAAGTACCTGCAGATCACACATCTGAGGGTAATAGCACAGCCACTGGTGGAGTTTGTAAGAAGGCTAGGGTTCAACCACCTTCAGGCCAGCCTCCTCTCAAGGTGAGAAAGGAGAAGCTGGGAGATAGAATAACAGCCCTTCATCAGCTTGTTTCCCCATTTGGAAAGACTGACACAGCTTCTGTGATGTCAGAAGCCATTGGATATATCAGATTCCTTCAGAGTCAAATTGAGGCTCTCAGTTCTCCTTATTTGGGAAATTCATCAAAAGGCATGAGGAATTATCATTCTATACATGGAGAGAGAAATTTAGTATTTCCTGAGGACCCAGGCCAGCTGTTGAATGACTCTGGCCTGAAAAGAAATGGAGCTCCAAGCCAGGATCATGCAGAACAAAAGCCAAAGGACTTGAGGAGTAGAGGGTTGTGCTTGGTGCCTTTGTCTTTCACCCAACATTTTGGAAGTGAAAATGGAGCTGATTATTGGTCTTCAGCTTATGGCAGTGGATTTTAA 969 0.4334 MMGGNNNWWNNMHGYVLGSSIPFNSLTENPEPPPSWSQLLFSGVPGEEERLGFDHFQPKKLETWDEQILNPSLSRVQLVDELKQEVSQGGNLYGHGGEEFQGTSSGSANWSHMVVPVSSSPRSCVTSLSSNNNNNNNKILDFTYNMEENRKSQVPADHTSEGNSTATGGVCKKARVQPPSGQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVMSEAIGYIRFLQSQIEALSSPYLGNSSKGMRNYHSIHGERNLVFPEDPGQLLNDSGLKRNGAPSQDHAEQKPKDLRSRGLCLVPLSFTQHFGSENGADYWSSAYGSGF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1644 322 MobiDBLite consensus disorder prediction 258 289 - -
Dere11g1644 322 FunFam Transcription factor bHLH123 family 186 249 - -
Dere11g1644 322 MobiDBLite consensus disorder prediction 154 185 - -
Dere11g1644 322 CDD bHLH_AtbHLH_like 186 233 IPR045239 -
Dere11g1644 322 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 186 237 IPR036638 GO:0046983
Dere11g1644 322 Gene3D - 186 241 IPR036638 GO:0046983
Dere11g1644 322 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 74 304 - -
Dere11g1644 322 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 176 225 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1644 Dere-ChrDere11 30097175 30101807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1644 26 265 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.649 1.14e-45 157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1644 11 30097175 30101807 Dere11g1644 11 30097175 30101807 ECH