Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1612 ATGAGTGAAGAATACCCAACCCATTATTCAAGCACTGCTTTGATGTCAACAATGGGCGCAATGCGGGCCACAGTGTTTGCTCTTTGTGTTGAGAAGGATTGGAGCCAATGGAGGCTGCATTGGAATGTTCTAACTGCAGCTTATTCGGGAGTTGTGGCGTCTGGGATAATGATGGTTGTAGCAGCATGGTGTGTAAGGATGGGAGGCCCAGTGTTTGCCTCTATTTTCAACCCTCTCATGCTTGTGCTTGTGGCCATTGCTGGCTCACTCATGTTAGATGAGAACCTACACTTGGGAAGGGAAAGAGCGAAGAAATGA 318 0.478 MSEEYPTHYSSTALMSTMGAMRATVFALCVEKDWSQWRLHWNVLTAAYSGVVASGIMMVVAAWCVRMGGPVFASIFNPLMLVLVAIAGSLMLDENLHLGRERAKK 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1612 105 SUPERFAMILY Multidrug resistance efflux transporter EmrE 34 99 - -
Dere11g1612 105 PANTHER WAT1-RELATED PROTEIN 2 98 IPR030184 GO:0016020|GO:0022857
Dere11g1612 105 Pfam EamA-like transporter family 8 98 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1612 Dere-ChrDere11 29737861 29739646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1612 1 99 Nodulin-like Gene Family AT1G68170 45.545 2.44e-26 98.2