Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1572 ATGCGCTTCGACATAGCGCCAAGGGTGACTCATTTCGGGGATCTGGAAGCTCTGGAAAGCAAAGCGGTGTCGCACAAATCACTGATGGCGACACCACCGATGGGGCTGCCGGGAAACCCAATGTTCGACGGGGCTCCGCCGCCTCCCCCACAACCTCCGGGGACCGACATGACCGGCATATGCTTCCGAGACCAGCTTTGGCTCAACACTTACCCTTTGGATCGCAATCTTGTGTTCGATTATTTCGCCTTATCCCCTTTCTACGACTGGACCTGTAACAATGAACAGCTTCGAATGCGCTCCATTCACCCTCTCGATATCTCTCAATTATCGAAAATGACAGGCGTAGAGTATGTGCTCAGTGAAGTTTTGGAACCTCACCTTTTTGTCATTCGCAAGCAAAAAAGAGATGGCCCTGAGAAAGTTACACCAATGCTGGCATATTACATCTTGGATGGTTCAATATACCAAGCACCACAACTATGCAATGTTTTTGCCGCTCGAATTGGAAGGGCACTCTATCATATACAAAAGGCTTTTAGTACAGCTGCATCAAAATTGGAGAAAATAGGATATGTTGATTCTGAAAATGAGCCTGCAGTGCCAGAACCAAAGGTTGGTAAGGAGACAATTGACTTAAAGGAAGTTATGCGAGTGGATCACATTCTTGCATCCCTACAGCGTAAGCTACCTCCGGCTCCACCTCCACCACCATTTCCTGAAGGCTACGTTCCACCTTCAACTGCAGAAACTGAGAAAGGTCTTGAAAGCCAGGAACCAGGAGAGTCTCAAGCTCCTCCTGTTGATCCTATAATTGATCAAGGACCCGCAAAAAGAATAAAAATTTGA 849 0.4747 MRFDIAPRVTHFGDLEALESKAVSHKSLMATPPMGLPGNPMFDGAPPPPPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDISQLSKMTGVEYVLSEVLEPHLFVIRKQKRDGPEKVTPMLAYYILDGSIYQAPQLCNVFAARIGRALYHIQKAFSTAASKLEKIGYVDSENEPAVPEPKVGKETIDLKEVMRVDHILASLQRKLPPAPPPPPFPEGYVPPSTAETEKGLESQEPGESQAPPVDPIIDQGPAKRIKI 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1572 282 MobiDBLite consensus disorder prediction 227 282 - -
Dere11g1572 282 PANTHER MED-6-RELATED 41 281 IPR007018 GO:0003712|GO:0006357|GO:0016592
Dere11g1572 282 FunFam Mediator of RNA polymerase II transcription subunit 6 54 183 - -
Dere11g1572 282 PIRSF MED6_meta/plant 45 282 IPR016820 GO:0003712|GO:0006357|GO:0016592
Dere11g1572 282 MobiDBLite consensus disorder prediction 229 244 - -
Dere11g1572 282 Pfam MED6 mediator sub complex component 60 185 IPR007018 GO:0003712|GO:0006357|GO:0016592
Dere11g1572 282 Gene3D Mediator complex, subunit Med6 54 183 IPR038566 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Dere11g1572 Med6 3.7e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1572 11 28744298 28747343 Dere11g1572 11 28744298 28747343 ECH