Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1570 ATGGGAATGTCAGAGAGTTTCTTCTTTGTTTTCGTAGGGTGTCTAGTTCCTGCGGTTCTGGTTCAAGCTCAAGATCAATCAGGATTCATAAGCATCGATTGTGGGATACCTGCAAAGTCCACCTACACTGAGAAGATAACAGGCATAAACTACATTTCAGATGCCAAGTTCATAAGTTCAGGTGTGAGTATGTCCATAACAACTGAGCTCAAAAGTGCCTATCAACAGCAGCTATGGAACCTGAGAAGCTTTCCTGAAGGAACAAGAAACTGTTACAGAATAAACATCACAAGTGGCTCTAAATATCTGATCAGGGCCAATTTTTTGTACGGGAATTATGATGGCCAAAATGAGTTACCAAGATTTGATCTTCATCTTGGGCCTAACCTGTGGGATACAGTGAAGATAACTAATGCATCTCTTTCAGAAAGCCCCGAAATCATACATGTTCCATCACTAGATTACGTACAAATCTGTCTGGTTAACACAGGCTTTGGAATACCATTTATCTCAGCTATAGAGTTAAGGACTTTGATGAATGATACTTATGTCACTAACTTTGGATCATTGTCGAAGTATTTTAGGTTGGATTTAGGCTCAACCAGCAACATTTCATACAGGTATAGTTATGATGTTTATGATCGTTTCTGGTCATATAATGTCTACAACGAGGCTTGGACGCAAATAAGTGCTTCAATTCCTGCAGATTCCTTAGCTCAGAATCATTACCAACCACCAGCAGTTGTCATGAGTAATGCAGCCACACCAGTAAATGACAGTGCTCCTATGTTAGTGTGGTGGGAACCAGAAGATAAAACAGACCAATTCTATGTTTACATGCACTTTGCAGAGGTTGAAGTTTTGGAAAAGAATCAGACAAGATCATTCAACATCACCCTAAATGGAAAGCTCTTTTATGACAACGTTGTACCTAAGTACGAAACCACTACCACTATATATAGTCTGTCAGCTACCAGTGGAGAAAAAATTCAATTTTTGCTTGTGAAGACTGAGCAGTCAACCCTCCCTCCCATCCTCAATGCCATTGAAATTTACACAGTTAAAGAATTTTCACAATCAGAAACAGATCAAGGAGATGTTGATGCAATTACAACAATCAAGTCTGCTTATGGGGTGACAAGAAATTGGCAAGGAGATCCATGTGGTCCTGTGGCCTACATTTGGAATGGTCTAAATTGTACTTATTATGGCAAAAATTCCCCTAGAATTACAGCTTTGAATCTATCTTCAAGTGGATTGACAGGGCAGATAGATCCTTCCATCTCAAAGCTCACCATGTTGGAGATGTTGGATTTATCAAACAACAGCTTAAATGGACCAGTGCCTGATTTTCTGTCTCAATTACAAAACCTGAAGATCTTAAACTTAGAGAACAACAACTTGACCGGTTCAATTCCTTCTGATCTGGTTGAAAAATCAAACAAAGGTTCCCTTTCACTAAGTGTTGGCCAAAATCCATATCTATGTGAATCTCCTCCGTGCGACAAGAAGGGAAAAAAGAAGAATATTGTTATTCCCGTAGCAGCATCAGTTGGTGGAGTTCTGATCCTTTTGGTAGCCGTGGCAATTATATTTTGTACCCTTAAAAGAAGAAAACCAAAAGCTGTGGCTGTGGAAACAGTTCCAAATATGACCTCACAGCGAGTTGAAGAAGTAGAAAAACAAAATGACTCCTCACTGCAAGTCAAAAATCGACAATATTCATACTCTGATGTCCTCAAAATGACCAACAACTTTAGTACAATTCTTGGTAAAGGTGGGTTTGGAACAGTTTATTTGGGCTACATCGATGAAACTCCGGTTGCAGTTAAAATGCTCTCTCCATCATCAGTTCAAGGTTATCAGCAATTCCAAGCAGAGGTTAAACTTCTGATGAGAGTTCATCACAAAAATCTGACTTCTCTTATCGGGTATTGCAATGAAGAAACCAATAAGGGGCTCATATATGAGTACATGGCTAATGGGAACTTACAAGAACACCTTTCAGGAAAAGACAGCAAATCAAAGTTCTTGTCTTGGGAAGACAGACTTTTCATAGCAATGGATGCAGCCCTAGGGTTGGAGTATCTGCATAATGGATGCAAGCCACCTATAATCCACAGAGATGTAAAATCCTCTAACATCTTGCTAAATGAAAACTTCAGAGCAAAACTTGCCGATTTTGGTCTATCTAAAACTATCCCAACTGATGGGGAAACTCATGTGTCAACTGCTGTGGCTGGTACTCCTGGTTTTCTTGACCCTGAGTACTACATAACAAACAGATTAACAGACAAAAGTGATGTTTATAGCTTTGGAGTTGTTCTTTTGGAGGTAATCACAAGTCTACCAGCCATATCTAGAAGTCATGAGAAAACTCACGTAAGTCAATGGGTTAGCTCCATGGTAGCCAAAGGGGATATCAAGACCATCATTGACTCTAGGTTAAATGGAAACTTTGACAGTAACTCTGTTTGGAGAGCTGTGGAAATAGCAATGACTTGTGTGTCTCCAAACCCTAACAGCAGGCCAACCATGAGTGAGGTAGTAACTGAGCTAAAGGAGTGTTTGGCAACTGAATTAGCTCGAACCACACATAGTGGTGCTAATACAGGAGATTCAGTTGAAGTAGTCACCATGAATATGACTACAGAACTCTCTCCCCTGGCCAGAACGCGATCAAGCTCCAATAGAGAAGTAATGTTGCATCAGAAGTTGCTGTTTGGATGCTTTAGCTAG 2739 0.4005 MGMSESFFFVFVGCLVPAVLVQAQDQSGFISIDCGIPAKSTYTEKITGINYISDAKFISSGVSMSITTELKSAYQQQLWNLRSFPEGTRNCYRINITSGSKYLIRANFLYGNYDGQNELPRFDLHLGPNLWDTVKITNASLSESPEIIHVPSLDYVQICLVNTGFGIPFISAIELRTLMNDTYVTNFGSLSKYFRLDLGSTSNISYRYSYDVYDRFWSYNVYNEAWTQISASIPADSLAQNHYQPPAVVMSNAATPVNDSAPMLVWWEPEDKTDQFYVYMHFAEVEVLEKNQTRSFNITLNGKLFYDNVVPKYETTTTIYSLSATSGEKIQFLLVKTEQSTLPPILNAIEIYTVKEFSQSETDQGDVDAITTIKSAYGVTRNWQGDPCGPVAYIWNGLNCTYYGKNSPRITALNLSSSGLTGQIDPSISKLTMLEMLDLSNNSLNGPVPDFLSQLQNLKILNLENNNLTGSIPSDLVEKSNKGSLSLSVGQNPYLCESPPCDKKGKKKNIVIPVAASVGGVLILLVAVAIIFCTLKRRKPKAVAVETVPNMTSQRVEEVEKQNDSSLQVKNRQYSYSDVLKMTNNFSTILGKGGFGTVYLGYIDETPVAVKMLSPSSVQGYQQFQAEVKLLMRVHHKNLTSLIGYCNEETNKGLIYEYMANGNLQEHLSGKDSKSKFLSWEDRLFIAMDAALGLEYLHNGCKPPIIHRDVKSSNILLNENFRAKLADFGLSKTIPTDGETHVSTAVAGTPGFLDPEYYITNRLTDKSDVYSFGVVLLEVITSLPAISRSHEKTHVSQWVSSMVAKGDIKTIIDSRLNGNFDSNSVWRAVEIAMTCVSPNPNSRPTMSEVVTELKECLATELARTTHSGANTGDSVEVVTMNMTTELSPLARTRSSSNREVMLHQKLLFGCFS 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1570 912 CDD TM_EGFR-like 514 539 - -
Dere11g1570 912 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 659 866 - -
Dere11g1570 912 Gene3D Transferase(Phosphotransferase) domain 1 659 877 - -
Dere11g1570 912 SUPERFAMILY L domain-like 383 488 - -
Dere11g1570 912 Pfam Malectin-like domain 32 354 IPR024788 -
Dere11g1570 912 Pfam Protein tyrosine and serine/threonine kinase 587 853 IPR001245 GO:0004672|GO:0006468
Dere11g1570 912 PANTHER OS07G0107800 PROTEIN-RELATED 30 860 - -
Dere11g1570 912 ProSiteProfiles Protein kinase domain profile. 584 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1570 912 FunFam Leucine-rich repeat receptor-like protein kinase 559 658 - -
Dere11g1570 912 SUPERFAMILY Protein kinase-like (PK-like) 564 853 IPR011009 -
Dere11g1570 912 Gene3D Ribonuclease Inhibitor 368 487 IPR032675 -
Dere11g1570 912 Gene3D Phosphorylase Kinase; domain 1 565 658 - -
Dere11g1570 912 SMART serkin_6 584 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1570 912 CDD STKc_IRAK 590 855 - -
Dere11g1570 912 ProSiteProfiles Leucine-rich repeat profile. 457 479 IPR001611 GO:0005515
Dere11g1570 912 PRINTS Leucine-rich repeat signature 455 468 - -
Dere11g1570 912 PRINTS Leucine-rich repeat signature 434 447 - -
Dere11g1570 912 FunFam Leucine-rich repeat receptor-like kinase 365 498 - -
Dere11g1570 912 ProSitePatterns Serine/Threonine protein kinases active-site signature. 705 717 IPR008271 GO:0004672|GO:0006468
Dere11g1570 912 Pfam Leucine rich repeat 408 468 IPR001611 GO:0005515
Dere11g1570 912 ProSitePatterns Protein kinases ATP-binding region signature. 590 611 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1570 Dere-ChrDere11 28686382 28692105 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1570 1 891 Receptor kinase-like Gene Family AT1G51800 51.160 0.0 906
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dere11g1570 Malectin_like 5.1e-116 CL0202