Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1569 ATGATATTCGTCCTCCTAAGTCCTAACCAAGACATAACAATGCAATCAAAGAAGGGAATGTTACATCCCTCTCTTTGTGCATTGCTTGGAGTTCTTCTAACAATTGAGGTTGTAGTTCAAGCTCAAGATCAATCAGGATTCATCAATATAGATTGTGGCCTACCTGCTAATTCAAGCTACATAGAGAAAACCACAGGCATAAACTACATTTCAGATGAAGAATTCGCTGATACTGGAGAAAGTAAGCAAATATTGGCTGAATACAAGAGTGGCTATCAGCAACAACTGGCATATCTGAGAAGCTTTCCAACAGGACAAAGAAACTGCTACAAAGTAAATGTCACAAGTTGGACTAAGTATCTAATCAGAGCTACTTTTCTTTATGGGAATTATGATGGCCTGAACGAGATTCCAAAGTTTGATCTTTATCTTGGAACTGTTCTATGGGAAACAGTGAAGCTCACCAATGTCTCTCTTAGCACTTACTATGAGATCATTCACACCCCATCACTGGATTATGTTCATGTCTGTCTGGTTAACACAGGCTCTGGGACACCCATAATTTCAGTTCTTGAATTGAGGACTTTGAATAATGATATCTATGTCACTGGATCTGGGTCTCTGTCTCGTTACATGCGATATGACTTTGGTTCTATCACCAATGTCACGTACAGGTACAAGGTGGATGTTTATGACCGTTTCTGGGCGCCTATTGCCTTCTCGGGGTGGTCGCATTTAAGCACAACCATTGGTCAAGATTCTCTATTTCTGAACAATTTCACTGTACCTGCAGTTGTATTGAGCTCTGCAGCTACCCCAACAAATTCTAGTGCTTCTTTTGATTTCTACTGGGACCCTGATGATGTAGATGAACAATACTACGTCTACATGCACTTTAATGAGGTTGAACTTCTTTCAGCAAACGACACCAGAGCTTTCAATATCTCTCTCAATGGCAAATATTGGTACGGACCTTTGGTTCCGCTTTACCAGACTGCAAATACCATATACACATCTTCAGCTTTGACTGGAGAAAAGCGATATCTCTTTTCTCTTTTCATGACTGAGACTTCAACCCTTCCGCCCATCCTCAATGCTCTTGAGGTGTTTGATATTATGGATTTCAAGAGGCATTTAAGATACAACCATCCAAGAAACTTGGAAAATAACAACCTCACAGGTATAGTTCCCAGTGAACTTGTTGACAGATCAAAGAAAGGTTCACTATCATTGAGGTACTACATATCAAATAGATTGACAGAGAAAAGTGATGTGTACAGTTTTGGAGTAGTGATTTTGGAGATAATCACAGGTCAACCAGCGATATTAAGAGCACATAGCCATGAAAACACTCACATTATTCAGTGGGTTAACTCAAGGGTGGCTCAAGGAGATGCCAAGGGCATATCAGACTCAAGATTTCAAGGCCATTTTGACACAAGCTCTATCTGGAAAGCTATTGAACTAGCAACTAAATGTGTCTCCACCAACCCTAATAAAAGGCCAAACATGAGTGAAGTAGTGAAAGAACTAAAGGATTGTTTGGCTACAGAATTAGCAGAAACCAAATCTACTGGCCAAGACAATGAAAACATTCCATCCGCTGAATTCATCACTATGAATCTGACTACTGAACTCAACCCCAGGGTTAGGTAG 1656 0.4022 MIFVLLSPNQDITMQSKKGMLHPSLCALLGVLLTIEVVVQAQDQSGFINIDCGLPANSSYIEKTTGINYISDEEFADTGESKQILAEYKSGYQQQLAYLRSFPTGQRNCYKVNVTSWTKYLIRATFLYGNYDGLNEIPKFDLYLGTVLWETVKLTNVSLSTYYEIIHTPSLDYVHVCLVNTGSGTPIISVLELRTLNNDIYVTGSGSLSRYMRYDFGSITNVTYRYKVDVYDRFWAPIAFSGWSHLSTTIGQDSLFLNNFTVPAVVLSSAATPTNSSASFDFYWDPDDVDEQYYVYMHFNEVELLSANDTRAFNISLNGKYWYGPLVPLYQTANTIYTSSALTGEKRYLFSLFMTETSTLPPILNALEVFDIMDFKRHLRYNHPRNLENNNLTGIVPSELVDRSKKGSLSLRYYISNRLTEKSDVYSFGVVILEIITGQPAILRAHSHENTHIIQWVNSRVAQGDAKGISDSRFQGHFDTSSIWKAIELATKCVSTNPNKRPNMSEVVKELKDCLATELAETKSTGQDNENIPSAEFITMNLTTELNPRVR 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1569 551 Pfam Malectin-like domain 50 371 IPR024788 -
Dere11g1569 551 PANTHER OS07G0107800 PROTEIN-RELATED 412 515 - -
Dere11g1569 551 SUPERFAMILY Protein kinase-like (PK-like) 417 516 IPR011009 -
Dere11g1569 551 Gene3D Transferase(Phosphotransferase) domain 1 372 538 - -
Dere11g1569 551 Pfam Protein tyrosine and serine/threonine kinase 417 511 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1569 Dere-ChrDere11 28676509 28682768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1569 407 551 Receptor kinase-like Gene Family AT1G51800 43.448 4.22e-32 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dere11g1569 Malectin_like 4.9e-111 CL0202