Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1563 ATGACAAAACATTCACTGTTTGAAATCTTTCAACTTTCCTTGACTCTTGCAGTTCTTGTTCATGCTCAGGATCAATCAGGCTTCATTAGCATTGACTGTGGACTTGTCGATGAACCAAACTATAGAGATGAAACTACAGGCATCAATTACACTACAGACGCTAATATCATAGACAGGGGTGTAAGCTACAACATATCCTCAGAATACAAGTCCAATTCCCTACCGAGGCAGTTCTGGAATGTTCGAAGCTTCCCAGAAGGAGCAAGAAACTGCTACACCTTTAATGTTCCTCGTACAAACAGCAACAAACGTCTAATAAGGATGAGGTTCATGTACGGAAATTACGATAAAAAAGAGAGTTTGCCAAGATTTGATGTGTATATTGGTGCCAACAGATGGGATATGGTGGAGTTCGAGAATGCTTCAAGTCTAGTAAGCAAGGAAATGGTTGATATTGCCTCATCAGATTACGTTCATGTTTGCCTTGTTAATACAAATAGTGGGGTTCCTTTTATTTCAGCTTTGGAGATTAGGATTCTCAAGAATGATACCTATTTGTATCAATCTGAGCCGTTGGAGCTGTTGGAACGATTTGATGTAGGCTTGCAGGAACATCAAATGATCAGTCCATTCTTCTTCGAGGTGCCCTCAATTGTGCAGAGCACTGCAGTAACACCAGCGAACGAGAGTGACAATTTGAGATTTTCTTATAGCCTGAATGATGAAGTTGCCCTATTTTATGTGGCCTTGTATTTTGCTGAGATTCAGAGGCTCCCAAGTAATCAAACTAGAGCATTCAATATCTATGTCAATGGGGGGCCTTTACTCCCAGTCAATCTTCCTTTCTTGGGCGTTGCTGCTGAAGTTTATGCACCAGCCTCTCGACTTGAATCTAAGATTGAAATTTGGATAAATAGAACAGATGCATCAACTGTTCCACCTGTTCTCAATGCCATCGAGGTTTATAGAAGGAAGGTTTTCAATCAACCAGAAACTGACCAAAATGACGGTACGTGCTTAAATCTGGAAGGAAATAAGTTGTCAGGGTCTATTCCAGCCATCCTCATTGAGAAATCAAGGAATGGTTCGCTTATATTAAGAGTTGGTGAAAATCCAAATATTTGCACCTCTGGTCCATGCCACAAGAGGAATAAGGTAGTAATTCCTTTGGTAGTTTCATTTGGTGGAGCTTTCATCCTTTTAGCAGTACCACTCTTCATTTTCAGAAGAAGACGACAAGGTATCACCAATTTGAAGAAGACGAGTTCTTGTAATTCTAATGATTATAAGAGTATGGACTCAAAGAAGAAAGAGTTCACCTACTCCGAGGTTGTAAGTATTACCAATAACTTTGAGAAGGTTGTGGGCAAAGGAGGTTTTGGAACAGTATACCATGGTTGCATAGGTGAGATGCAAGTAGCAGTGAAGATGCTCTCTCCCTCAGCTCAAGGCTATCAGCAATTTCAAGCAGAGGCGAAAATTCTTACTAGAGTTCACCATAAATGCTTGACTCCTCTTATTGGTTATTGCAACGAAGAAGGCACACAAACCGCACTTATCTGTGAGTACATGGTCAACGGGAACTTGGCACAGAATCTATCAGGATCCTCTCTCGTAATGGAGAGAATCCTGTGGGAGAGAAAAATGGAGAGGAAGAAAGAGTGTATTGGGCTCACTCAAACCTATCAGGATTTTAACATTCCTTACCAAAATTTGTTACAATGGGGCATGGATGCAGATAAATGCCAAAATTGTCTTACTTGGAGACAGAGACTGCAGATTGCACTGGATGCTGCAATAGGGTTGGAGTATCTTCATAATGGTTGCAAACCCGCAATTGTTCACAGAGATGTTAAATCTAGCAACATCTTACTCAATGAAAGATTCCGTGGTAAAATATCTGATTTTGGGTTGTCCAGAATCTTCCCTGATGAGAGTGACACTCATGTTTCAACAGTGATTGCTGGCACCCCAGGATACCTTGACCCTGAATACTATATAACAAACAGTGAATTGGTTCTATGCTACCAGAAAGGAAGATTACTGATATTGCAGATTCAAGATTACAAGCAGAATTTGAAACGATTCTAATTAGCAGCATTGATTTTGGCAAGGAAAGAAGTTTCAAGGTTTTGGGGAGCAGCCATTTCGACATATAGACTTGCTCAAGTCAAGATGTTTTGACATATCCTACTTGCAGTGTTCCAACTTTCTTTAACCCTTGCAGTCCTGGTTCATTCCCAGAATCAATCAGGATTCATCAGTATTGACTGTGGACTCGTGGATGAACCAAGCTACACAGATGAAACTACTTCCATCTATTACACTTCTGATGCGGACTTCGTATCCACTGGAATCACCCACAACATATCTTCCAAACATAAGACACAAACCCTTAAGAGGCAGTTCTGGAATGTTCGAAGCTTCCCAGATGGAACTAGGAACTGCTATACCCTTAATACTCCTCAAGGAAGTAGCAGCAAGTACTTAGTGAGGGCCATGTTCATGTATGGAAACTATGATGCAGAAAACTCTCTTCCCAAATTTGATATCTATCTTGGAGCTAAATGGTGGGACTCAGTGATGTTTGAGAATGCATCAGAAATAGTAACCAAGGAAATCATTTATGCTGCTAAATCAGATTATGTTCATGTTTGCCTTTTTAACACCAACAATGGTACACCTTTCATATCAGTTTTGGAGCTCAGAGTTCTAGACAATGATGATGCCTATCTTGTTAGCTCTCTGGAGCTCTTGGCTCGCTATGATTTCGGTTTGCAGGATGGTGAATCAGTCAGATACCCAGCTGATGTGTACGATCGGATATGGACACCTTATACCTCAAATGACTGGAAACAGATAAATACCTCACTCCCTGTACACCAAGAAGCATCATCATCGTACAGTTTCTTAATATCACCACCCTCCATTGTCATGAGAACAGCAGCAACTCCAGCAAATGTCAGCAACAACATGGAATTCAAGTTCCTGCCCAGGTATAATGCTTCTACATATTACGCATACATCTACTTCGCAGAAATTCAGAAGCTCCAAGCAAATCAAATCAGAGAATTTGACACTTTCTTGAATGGAGATCGTGTTAATACTGGTCCTATCAGTGCCTCGTACTTGGAAAGCTTGCCCTATGTAGCAGCAATTAATGAACCTCGGTTGGATATTTGGGTTAATAGAACTCATAGATCGACTCTTCCTCCTCTTTTCAATGCCATTGAGATATATATGACCAAGGATCTCTCACAATCACAAACAGAGCAGACTGACGTTGATGCTATCATGAAGATCAAGTCAATTTATGGGATCAAGAGAAACTGGCAAGGAGACCCTTGTACTCCTCCGGCTTACTTGTGGGATGGTCTCAACTGCAGCTACGATGGATCTGGTCCACGAAGGATCACATCCTTGAACTTGTCCTCTGGTGGATTAGTTGGAAATATAGCTCCAGACATATCCAACTTGAATTCATTGGAGTATCTGGATCTGTCAAACAATAGTCTAGTTGGGGATGTACCTAGTTTCCTGTCTCAACTGACCTTCTTGAGGGTTCTAAACCTTGAAGGCAATAAGCTAACAGGAACAATTCCAGCAGAACTCACAGAGGCGTCAAAGAATGGATCACTTAAATTCAGTTTTGGTGGAAATCCAAATCTTTGCACTGCAGGTTCATGCAAGAGGAATAGTACAAAGATTGTCATTCCAGTAGTGGCATCACTAGCTGGAGCTTTCGTGGTGCTAGTAGCCACCATCACTTTCTACATCTTCAAAAGAAGACAAACAGTTTCTGTCTATCCAGGGAAGAAATATTACTCTAAGATAATTAAGGAGCTAGAGTCAAAGAAACAACAATTCACATATGCTGAAGTTTCTAGCATTACCAACAACTTTGAAAGGCTTGTGGGAAAAGGAGGATATGGAACAGTGTACCATGGCTTCTTAAGTAACACGCAGGTAGCTGTCAAAGTGCTCTCTCCTTCAGCTCATGGATATCAACAATTTCAGGCAGAGGCAAAACTTCTAGCTAGAGTTCACCATAATCGCTTGACTGCTCTGATCGGGTTTTGCGATGATGGCTCCAACATAGCTCTCATCTATGAGTATATGGCTAATGGAGACTTAGCTAAGAATTTATCAGAGAGAAATGAAAATATCTTGGGATGGACACAACGGCTTCAAATTGCAGTGGATGCTGCAGAAGGATTGGAGTATCTGCATAAGAGTTGTAAGCCACCAATTGTTCACAGAGATGTTAAATCCAGTAACATCTTACTGAATGATAATTTTCGAGGTAAAATAGCTGATTTTGGATTGTCAAAGATCTTTCCCAATGAAGGTGATACCCACATGTCCACAGTAATTGCTGGTACCCCAGGATACCTTGACCCTGAGTACAATATATCAAACAGGTTGAATGAAAAAAGTGATGTTTACAGTTTTGGGATTGTTCTGCTTGAGATAATTACAGGACGACCTGCCATAGCCAAGACTGAAGATGAAGAGAGAGTTCACATAATCCAATGGGTTCATTTCATGCTTCCTGAAAGGGAGATTGATGATCTTATGGATCCAAGATTGCAGGGAAATTGTGATACTGATTCTGCAAGAAAAGCCTTGGATACTGCAATGGCTTGTGTAGCTCCCACTTCTATTAATAGGCCAACCATGAGTCACGTAGTAATGGAATTGAGACAATGTTTGGCTATGGTGACCCCTACTGCAACTAATAGTTCAATTGATTATTCCTTTGGTACAATTAGCGGAGACTGTTCTCTAGCAAGATAG 4797 0.4088 MTKHSLFEIFQLSLTLAVLVHAQDQSGFISIDCGLVDEPNYRDETTGINYTTDANIIDRGVSYNISSEYKSNSLPRQFWNVRSFPEGARNCYTFNVPRTNSNKRLIRMRFMYGNYDKKESLPRFDVYIGANRWDMVEFENASSLVSKEMVDIASSDYVHVCLVNTNSGVPFISALEIRILKNDTYLYQSEPLELLERFDVGLQEHQMISPFFFEVPSIVQSTAVTPANESDNLRFSYSLNDEVALFYVALYFAEIQRLPSNQTRAFNIYVNGGPLLPVNLPFLGVAAEVYAPASRLESKIEIWINRTDASTVPPVLNAIEVYRRKVFNQPETDQNDGTCLNLEGNKLSGSIPAILIEKSRNGSLILRVGENPNICTSGPCHKRNKVVIPLVVSFGGAFILLAVPLFIFRRRRQGITNLKKTSSCNSNDYKSMDSKKKEFTYSEVVSITNNFEKVVGKGGFGTVYHGCIGEMQVAVKMLSPSAQGYQQFQAEAKILTRVHHKCLTPLIGYCNEEGTQTALICEYMVNGNLAQNLSGSSLVMERILWERKMERKKECIGLTQTYQDFNIPYQNLLQWGMDADKCQNCLTWRQRLQIALDAAIGLEYLHNGCKPAIVHRDVKSSNILLNERFRGKISDFGLSRIFPDESDTHVSTVIAGTPGYLDPEYYITNSELVLCYQKGRLLILQIQDYKQNLKRFXLAALILARKEVSRFWGAAISTYRLAQVKMFXHILLAVFQLSLTLAVLVHSQNQSGFISIDCGLVDEPSYTDETTSIYYTSDADFVSTGITHNISSKHKTQTLKRQFWNVRSFPDGTRNCYTLNTPQGSSSKYLVRAMFMYGNYDAENSLPKFDIYLGAKWWDSVMFENASEIVTKEIIYAAKSDYVHVCLFNTNNGTPFISVLELRVLDNDDAYLVSSLELLARYDFGLQDGESVRYPADVYDRIWTPYTSNDWKQINTSLPVHQEASSSYSFLISPPSIVMRTAATPANVSNNMEFKFLPRYNASTYYAYIYFAEIQKLQANQIREFDTFLNGDRVNTGPISASYLESLPYVAAINEPRLDIWVNRTHRSTLPPLFNAIEIYMTKDLSQSQTEQTDVDAIMKIKSIYGIKRNWQGDPCTPPAYLWDGLNCSYDGSGPRRITSLNLSSGGLVGNIAPDISNLNSLEYLDLSNNSLVGDVPSFLSQLTFLRVLNLEGNKLTGTIPAELTEASKNGSLKFSFGGNPNLCTAGSCKRNSTKIVIPVVASLAGAFVVLVATITFYIFKRRQTVSVYPGKKYYSKIIKELESKKQQFTYAEVSSITNNFERLVGKGGYGTVYHGFLSNTQVAVKVLSPSAHGYQQFQAEAKLLARVHHNRLTALIGFCDDGSNIALIYEYMANGDLAKNLSERNENILGWTQRLQIAVDAAEGLEYLHKSCKPPIVHRDVKSSNILLNDNFRGKIADFGLSKIFPNEGDTHMSTVIAGTPGYLDPEYNISNRLNEKSDVYSFGIVLLEIITGRPAIAKTEDEERVHIIQWVHFMLPEREIDDLMDPRLQGNCDTDSARKALDTAMACVAPTSINRPTMSHVVMELRQCLAMVTPTATNSSIDYSFGTISGDCSLAR 1598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1563 1598 ProSitePatterns Protein kinases ATP-binding region signature. 1305 1326 IPR017441 GO:0005524
Dere11g1563 1598 SUPERFAMILY Protein kinase-like (PK-like) 425 669 IPR011009 -
Dere11g1563 1598 FunFam Os07g0541700 protein 571 657 - -
Dere11g1563 1598 Gene3D Ribonuclease Inhibitor 1095 1217 IPR032675 -
Dere11g1563 1598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1417 1429 IPR008271 GO:0004672|GO:0006468
Dere11g1563 1598 Pfam Malectin-like domain 756 1081 IPR024788 -
Dere11g1563 1598 Pfam Malectin-like domain 31 206 IPR024788 -
Dere11g1563 1598 Pfam Malectin-like domain 213 323 IPR024788 -
Dere11g1563 1598 Gene3D Transferase(Phosphotransferase) domain 1 570 676 - -
Dere11g1563 1598 Gene3D Transferase(Phosphotransferase) domain 1 1373 1585 - -
Dere11g1563 1598 ProSiteProfiles Protein kinase domain profile. 449 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1563 1598 Gene3D Phosphorylase Kinase; domain 1 1281 1372 - -
Dere11g1563 1598 Gene3D Transferase(Phosphotransferase) domain 1 417 561 - -
Dere11g1563 1598 SMART serkin_6 1299 1571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1563 1598 ProSiteProfiles Protein kinase domain profile. 1299 1571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1563 1598 CDD STKc_IRAK 1305 1567 - -
Dere11g1563 1598 Pfam Leucine rich repeat 1136 1196 IPR001611 GO:0005515
Dere11g1563 1598 Pfam Protein tyrosine and serine/threonine kinase 1301 1563 IPR001245 GO:0004672|GO:0006468
Dere11g1563 1598 Pfam Protein tyrosine and serine/threonine kinase 451 661 IPR001245 GO:0004672|GO:0006468
Dere11g1563 1598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Dere11g1563 1598 FunFam Leucine-rich repeat receptor-like kinase 1093 1226 - -
Dere11g1563 1598 PANTHER OS07G0107800 PROTEIN-RELATED 754 1571 - -
Dere11g1563 1598 ProSitePatterns Protein kinases ATP-binding region signature. 455 476 IPR017441 GO:0005524
Dere11g1563 1598 SUPERFAMILY Protein kinase-like (PK-like) 1283 1567 IPR011009 -
Dere11g1563 1598 SUPERFAMILY L domain-like 1103 1206 - -
Dere11g1563 1598 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 1373 1579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1563 Dere-ChrDere11 28507711 28526160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1563 338 683 Receptor kinase-like Gene Family AT2G19210 44.568 1.05e-78 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dere11g1563 Malectin_like 4.7e-100 CL0202