Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1538 ATGAATCGAGAGCAGAAGCGAGGGAAGCAAGAAAAAGGTTCTGATGGTGCTGAGAAGGTCATTGTTGCCGTTAAGGCAGCAAAAGAAATTCCCAAGACTGCTCTTGTCTGGTCTCTAACTCATGTTGTCCAACCTGGGGATTGCATTACTTTGTTAGTGGTTGTTCCTTCACAAAGTTCAGGTAGAAGACTATGGGTATTTCCAAGATTCGCTGGCGATTGTGCCAGCGGTAGCAAGAAGTCTCCTTCAGGAACAAGTTCAGAGCAGAAGAGTGATATCACTGATTCTTGTTCCCAGATGATCCTTCAGCTCCATGACGTCTATGATCCAAATAAGATAAATGTCAAGATTAAAATTGTATCCGGATCGCCCTGTGGAGCAGTAGCAGCAGAGGCCCAGAAAGCCGAGGCCAATTGGGTCGTCTTAGACAAACAGCTCAAACACGAGGAAAAACGATGCATGGAAGAACTGCAATGCAACATTGTGGCTATGAAGCGCTCCCAACCAAAAGTTCTCCGCTTGAATTTGGTTGGATCACAAAAAAAGGATCTTGAAGAATCTGGCCCATTACCATCTGAGCAAGATGATCCTGGAAAACAAGCCAAACCGAAGAATGAATCTTTAAATTCGATAAAAGCACCTGTTGTCACTCCAACCAGCAGCCCAGAGCTAGGGACACCATTTACTGCAACTGAAGCTGGCACCTCATCAGTTTCAAGCTCAGATCCTGGAACCTCGCCATTTTTTGTCCCAGATATGAATGGTGAGTTAAAGAAAGAGGAAACCATAAAGGAAAATCAAGAACTTGATGATACTAATTCAGACACAGACAGTGAAAATATGTCCACATCTTCAGCAAGCCTGAGATTCCAGCCATGGATGACAGAAATGCTTTTACATCAACGATCATCTCAACAGACAGAGGAAAGATCTGAGAGATCTCACAATAAGCCTCAAACATCTACGACTAGAGCCTTGCTTGAGAAGCTCTCGAGGCTTGAGAGAGAATCTGGAATTGAATTCTCAACCTATAGAACTGACTTGGATTTCAGTGGAAATGTTAGAGAAGCAGTAGCATTATCCAGAAACGCCCCTCCCGGTCCTCCTCCATTGTGTTCAATATGTCAACATAAGGCACCTGTGTTTGGAAAACCTCCTAGGTGGTTTAGCTATGCCGAGTTGGAGCTTGCTACTGGTGGATTTTCACAAGCCAACTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTACCAGATGGGCAAGTCATCGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCTTGAGTTTTGCTCAGAGGTAGAAGTCTTGAGCTGTGCTCAGCATCGGAATGTTGTTATGCTGATTGGGTTTTGTATAGAAAATAAAAGAAGGCTACTGGTTTATGAGTATATATGCAATGGATCACTGGATTCTCATTTATACGGGAGACAACGGGAGCCATTGGAGTGGTCTGCCCGGCAAAAAATTGCTGTTGGAGCTGCTCGAGGGCTGCGATATCTTCATGAAGAATGCAGAGTGGGTTGCATTATACACCGTGATATGAGGCCAAACAATATTCTCATCACCCATGATTTTGAACCATTGGTTGGGGATTTTGGACTAGCAAGGTGGCAGCCTGATGGAGACACGGGGGTGGAAACCAGAGTAATTGGAACCTTTGGGTATCTGGCTCCAGAATATGCTCAAAGTGGCCAAATCACTGAAAAGGCTGATGTTTATTCCTTTGGGGTGGTGTTAGTGGAGCTTGTTACTGGGCGAAAAGCTGTGGATCTCAATCGGCCTAAAGGGCAGCAGTGTCTTACTGAGTGGGCGCGACCTTTGTTAGAAGAATACGCCATGGAGGAACTGATTGATCCAAGGCTGGGAAACTGCTATTCAGAAAATGAGGTCTATTGCATGCTGCATGCTGCCTCATTATGTATACAGCGAGATCCTCATTGTAGACCCCGCATGTCACAGGTTCTCCGAATACTTGAAGGTGACATGGTCATGGACACGAACTACATATCAAGTCCCGGTTATGACGCCGGGAACCGGAGTGGTAGAATTTGGGCGGAGCAGCAGAGGCAGAACCATTACAGTGGTCCTTTGTTGGATGAGCCACTGGAGGCATCGTTCAGTGGGAAGCTCTCTCTGGAGAAATACAGGTCTGCCTATTGGGAAAGGGACAAACCTAGACGAACTTCATGTGAAGCTGATTTGTAA 2244 0.4559 MNREQKRGKQEKGSDGAEKVIVAVKAAKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWVFPRFAGDCASGSKKSPSGTSSEQKSDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAAEAQKAEANWVVLDKQLKHEEKRCMEELQCNIVAMKRSQPKVLRLNLVGSQKKDLEESGPLPSEQDDPGKQAKPKNESLNSIKAPVVTPTSSPELGTPFTATEAGTSSVSSSDPGTSPFFVPDMNGELKKEETIKENQELDDTNSDTDSENMSTSSASLRFQPWMTEMLLHQRSSQQTEERSERSHNKPQTSTTRALLEKLSRLERESGIEFSTYRTDLDFSGNVREAVALSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIENKRRLLVYEYICNGSLDSHLYGRQREPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAMEELIDPRLGNCYSENEVYCMLHAASLCIQRDPHCRPRMSQVLRILEGDMVMDTNYISSPGYDAGNRSGRIWAEQQRQNHYSGPLLDEPLEASFSGKLSLEKYRSAYWERDKPRRTSCEADL 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1538 747 MobiDBLite consensus disorder prediction 203 247 - -
Dere11g1538 747 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 373 476 - -
Dere11g1538 747 MobiDBLite consensus disorder prediction 303 317 - -
Dere11g1538 747 ProSiteProfiles Protein kinase domain profile. 401 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere11g1538 747 MobiDBLite consensus disorder prediction 300 324 - -
Dere11g1538 747 Gene3D Transferase(Phosphotransferase) domain 1 477 682 - -
Dere11g1538 747 CDD STKc_IRAK 407 673 - -
Dere11g1538 747 MobiDBLite consensus disorder prediction 179 253 - -
Dere11g1538 747 Pfam Protein tyrosine and serine/threonine kinase 405 670 IPR001245 GO:0004672|GO:0006468
Dere11g1538 747 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Dere11g1538 747 PANTHER OS01G0750732 PROTEIN 246 679 - -
Dere11g1538 747 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
Dere11g1538 747 FunFam Dual-specific kinase DSK1-like 11 165 - -
Dere11g1538 747 MobiDBLite consensus disorder prediction 265 285 - -
Dere11g1538 747 SUPERFAMILY Protein kinase-like (PK-like) 385 679 IPR011009 -
Dere11g1538 747 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 477 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1538 Dere-ChrDere11 28260703 28265066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1538 381 690 Trihelix Transcription Factor Family AT1G70460 51.411 5.05e-101 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Dere11g1538 PK_Tyr_Ser-Thr 5.8e-41 CL0016