Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1511 ATGACTCAGACGACAACGTCGCGTCAGAAATCGGACGGTGCAGTTGTGTTGCTGCAAGGGTCCCACACACTAAACGTTTTGTCGTTGCAGGTTAAGGCAAAAAGTACAATTCGGAGTCGCCAAGCTTCTTCTTTGTTGGGACTTTCTGGTCACACATATTTTCTTCAGTTTTCTGATTTTCTCTGTTCAAATCAACCTCGTTTTGCTGATACACCCAAATCCCTCAAAGGGTTAATGGAGCAGAGTGTTTCTGAATTTTGCAGAGGAATGGAAATGCAAGCTATAAAACTTTCAGACATGGAGAACAAGAGAGAGATCGCATTGAGAAGTTCAATTAGCTTTAGGAAGCGAAATTTCGATGACTTCTGTGATGGGCTTGATGGGTTCGATGAGATTAGTACAGAAGAATGTAAACGTGCTAAGAGAAGGAACGTGCGAATTGCGAAGCTCCAAACTGCATTATTCTCACTCAAATATCTGGTTTCAGAAAATTGTCGTTTGGAGCGGTCGAAGGCTTTATACCCTGCTTTGAAATGGTGCTCTATCATACATACTGAAAAGTCAAAATCAGCCATTTCAAAGTGGGCACGAGCTGGAACAATGGCTGCTAAGGAAGAGAGGGAGGCATATGAGGTGACTGTAAATAATGGAAGGCTTGTGTTTAGAAAAAGCAAGGAAGTGGTACACACACCTGAGGGATCAAAGTGGATTTTTGTGCTGAGCACATCAAGAAGGTTGTACATTGGGGAAAAGAAGAAGGGCCTCTTTCATCATTCAAGTTTTCTTGCTGGGGCTGCCACCATTGCTTCTGGCAGATTGGTTGCATTCCATGGAGTTCTTGATGCTATGTGGCCCTATAGTGGTCATTATTGTCCAACGCCGAAGCAATTTAAGGAATTCATTGGCTTCTTGGAACAACATAATGTGGACTTGACGAAAGTGAAGACATATGCTGTGGATGATGATGTGCCTCCATCAAAACCAGTTGATGATCAGGAACAGTATGGGGATTGCATGGAGGGTGATGAGGATCAATTTGGAACCAATACTGTGGAGTCTTCACAAGTCAAACAGAGGAAGCCATTGTCAAACAAATGGACAACTTGGTCTGGTCCTAAGATTTCTTGTGCAAGAGAGTACCCTACAAAACGAATTCAGGCACTTCTATCTCCTAGGGTATTCAATCCTGGAAAATTTGGAAGAAGAACACCAATACCATCCCCAGAGTCTAGTTTGTATTTGGGACTTGCCACCCCAAGGCTGTGTCTCTCCCGCAAATTGGGCCCACAGTCATGTCGCTTGACCAGAACGGCGTCGTTTGAGTGGCTGGTGGTTAGTGGTCGCATTCATTATGACATCAACATTGTCACGTCGGAGCGTGGTAGAAAAATACTAGAAAAGTCTTGAATCTTCTATCAAATGGGTGCTTCAGGAAGGTGGTTGAAATCACTTATTTCTCATAAAAAGCCCTCCTCAAATGACCAAGAGAAGGTTGGTGATAAGAGTAAGAAGAAATGGAGGCTATGGAGAAGCTCTTCAGAAGGTTTCGGATTTGGGTCCTCCATGAAAGGCGTGAAGAAGGGACGCGATGCAGCATCGGAGAAGTCTGATTCATCTTCGTCTGTGGTCGATGATGCATATGCTGCTGCCATGGCTACTGTGGTAGTCCGAGCTGCTCCTAGGGATTTTACGCTAATCAAGCAGGAATGGGCTGCGATTCGCATTCAATCTGTGTTTCGAGGTTTCTTGGAAGGATGGTGTGACCATCCAGGAACTGTTGATGAAGTTAAAGCAAAGATACAAATGAAGCAAGAAGCAGTCATTAAGAGGGAGAGAGCCACGGCATATTCTCTCTCTGCACAGCAATCAAGACTGAGTGCTAGCCCAAAATCAAAAGCCACAAAGCCAGTGAACAAGAGCTTGGTAGAGCAGTGGATGTCAGCAAAGCCATGGGAAAGCAGGTTAATGGAAGGTACTTACTTTGACCCACCTGACATGACTCCATTGTCCAGGAAAAGCAATGCCCCTCTTCTTCCCTTGCATTCATATCAAGAACAATGTGGCTTAGTCAAAGCAAGAAGGAATGGTGTGACAACAAGGGTTTCCACTAAGTCTCTTACAACAACAACAACAACAACAACAACAAATCAATCAACTTCATCATCATCTTCAGCCATAAGTTCAGAATGCATGTATGATGATAGCCCTGAATCATCAACTTCATACACTTCCATATCACAATCTCTGCCATTTACCACCAATACTCTTGTGGAGGAAACAAGAGAGGAAAGGAGTGTGAATAAGCCAAGCTATATGAATCTGACACAGTCAACTAAGGCTAAACAAAGAGGTTGTGGCTATATGAATCTGAATGGAGATAGCAGAAGCAAGAATTCTGGTTCTCATCCTTCAGTTAATTTGTGGAAAGGTCTTTGTGCTACACCTGAAAGGTTGAGTTACCAAAAGAGAAACTCTGGGAGACAACAAATGCCAGGCTTAGTTTAG 2505 0.4359 MTQTTTSRQKSDGAVVLLQGSHTLNVLSLQVKAKSTIRSRQASSLLGLSGHTYFLQFSDFLCSNQPRFADTPKSLKGLMEQSVSEFCRGMEMQAIKLSDMENKREIALRSSISFRKRNFDDFCDGLDGFDEISTEECKRAKRRNVRIAKLQTALFSLKYLVSENCRLERSKALYPALKWCSIIHTEKSKSAISKWARAGTMAAKEEREAYEVTVNNGRLVFRKSKEVVHTPEGSKWIFVLSTSRRLYIGEKKKGLFHHSSFLAGAATIASGRLVAFHGVLDAMWPYSGHYCPTPKQFKEFIGFLEQHNVDLTKVKTYAVDDDVPPSKPVDDQEQYGDCMEGDEDQFGTNTVESSQVKQRKPLSNKWTTWSGPKISCAREYPTKRIQALLSPRVFNPGKFGRRTPIPSPESSLYLGLATPRLCLSRKLGPQSCRLTRTASFEWLVVSGRIHYDINIVTSERGRKILEKSXIFYQMGASGRWLKSLISHKKPSSNDQEKVGDKSKKKWRLWRSSSEGFGFGSSMKGVKKGRDAASEKSDSSSSVVDDAYAAAMATVVVRAAPRDFTLIKQEWAAIRIQSVFRGFLEGWCDHPGTVDEVKAKIQMKQEAVIKRERATAYSLSAQQSRLSASPKSKATKPVNKSLVEQWMSAKPWESRLMEGTYFDPPDMTPLSRKSNAPLLPLHSYQEQCGLVKARRNGVTTRVSTKSLTTTTTTTTTNQSTSSSSSAISSECMYDDSPESSTSYTSISQSLPFTTNTLVEETREERSVNKPSYMNLTQSTKAKQRGCGYMNLNGDSRSKNSGSHPSVNLWKGLCATPERLSYQKRNSGRQQMPGLV 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1511 834 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 204 388 IPR044159 -
Dere11g1511 834 MobiDBLite consensus disorder prediction 786 805 - -
Dere11g1511 834 MobiDBLite consensus disorder prediction 321 344 - -
Dere11g1511 834 MobiDBLite consensus disorder prediction 708 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1511 Dere-ChrDere11 27730930 27745177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1511 474 811 IQD Protein Family AT1G72670 29.773 3.61e-28 116
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere11g1511 11 27730930 27745177 Dere12g1394 12 25588908 25592252 CCT